Non-Coding RNA Search

Ss1.1-Lng1-LNG010007G12.5

Sequence:


               
               TGAGTAGCAGGCATGGAAAGCTCTTTCTGCTATGAGAGTTTGCTAATCCTAGAAGGTGGA
GTTTTGCTAGTATGTCTGATGCCGACATGGTCCTGCATTTATTGTTTTTCTTCCCAGCCT
TTTGCCTAAGAGCATTGGAGCCCTTATTTCTGCTAACTTTTGTCCTGCATTGAGGAGGTA
AAAGAGGTCTTTCAAAACTCCATGTGTACCAGGTACCTGCGAATTCTGAATTCAGGGTGC
TAGGAAAACAGAAAGCTTGAAAAGAAAGAAACTGTAGGCTCTCAAGGGCAAAAACCTTAT
CTTTCCTTTCGTTGTTCCTATACGTGTGTACTTATTTTCCATGAAGAGGGAATTGAGGAT
AAGCTTGTCATGATGGGACAGAACAACTAAGCAAAGGCATGAGAATGCGTGTGGGCCAAG
GCCTTGGAGTTGGTGACCAATCACTTCATTACATTGTCCACTAGAACAAGTTTTGAAACA
GGACAGTGGCTGTAAGGGAACTCCCTGTTAACGAGGTTGTATGCCAAATAGGTTAATTCA
TAAATATTTTAGGATGCACGACAGTCACTGGAACATCTTTTTTTCAGGGTTGGAGTAGCC
AAGGCATGTAAATTTTGTTTCCAGGGACTTTTTGTTTTTCTATTCAACGAACATGTAATA
TGTTCAGCTAAATTAAGAAATCATTGTTGCTGTAGAGGTAATGTGTGGACTGATGTTTTA
GAGACAATTACTGTTGAGAGTTTAAAAGGCGCACAAAAGAATTTCTTTTCCTTTCCCCTT
TTTCCTTTCTTTTTCTTTGCTCCGCATTCTCTTCCCTGCCCCTCTTCTCACATCACCTTC
ACCCATAACCACGCAAATGACCAAGTATATGTGATAGCATAGCTTTCTCCACGTTCATAT
CATCTCACACAATGCATGTATTACATAGAGTATTACTTTTTCTCAGTGTCTTAACAGAAA
TCAATCCAAGCCAAGTGATGTAGCTCCAGTCCATGCTTTTTAATGGCCACACATCGATGG
GTATTCCCTTTGTGTCTCTTTTGTTTTGTTTTCCTGTCTACAAAACATTACAAGAAGCAT
CCTGAAGTTCCCATTGTGGCTCAGTGGTAATGAACCTGACTAGGATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTAGCAGGCATGGAAAGCTCTTTCTGCTATGAGAGTTTGCTAATCCTAGAAGGTGGA
GTTTTGCTAGTATGTCTGATGCCGACATGGTCCTGCATTTATTGTTTTTCTTCCCAGCCT
TTTGCCTAAGAGCATTGGAGCCCTTATTTCTGCTAACTTTTGTCCTGCATTGAGGAGGTA
AAAGAGGTCTTTCAAAACTCCATGTGTACCAGGTACCTGCGAATTCTGAATTCAGGGTGC
TAGGAAAACAGAAAGCTTGAAAAGAAAGAAACTGTAGGCTCTCAAGGGCAAAAACCTTAT
CTTTCCTTTCGTTGTTCCTATACGTGTGTACTTATTTTCCATGAAGAGGGAATTGAGGAT
AAGCTTGTCATGATGGGACAGAACAACTAAGCAAAGGCATGAGAATGCGTGTGGGCCAAG
GCCTTGGAGTTGGTGACCAATCACTTCATTACATTGTCCACTAGAACAAGTTTTGAAACA
GGACAGTGGCTGTAAGGGAACTCCCTGTTAACGAGGTTGTATGCCAAATAGGTTAATTCA
TAAATATTTTAGGATGCACGACAGTCACTGGAACATCTTTTTTTCAGGGTTGGAGTAGCC
AAGGCATGTAAATTTTGTTTCCAGGGACTTTTTGTTTTTCTATTCAACGAACATGTAATA
TGTTCAGCTAAATTAAGAAATCATTGTTGCTGTAGAGGTAATGTGTGGACTGATGTTTTA
GAGACAATTACTGTTGAGAGTTTAAAAGGCGCACAAAAGAATTTCTTTTCCTTTCCCCTT
TTTCCTTTCTTTTTCTTTGCTCCGCATTCTCTTCCCTGCCCCTCTTCTCACATCACCTTC
ACCCATAACCACGCAAATGACCAAGTATATGTGATAGCATAGCTTTCTCCACGTTCATAT
CATCTCACACAATGCATGTATTACATAGAGTATTACTTTTTCTCAGTGTCTTAACAGAAA
TCAATCCAAGCCAAGTGATGTAGCTCCAGTCCATGCTTTTTAATGGCCACACATCGATGG
GTATTCCCTTTGTGTCTCTTTTGTTTTGTTTTCCTGTCTACAAAACATTACAAGAAGCAT
CCTGAAGTTCCCATTGTGGCTCAGTGGTAATGAACCTGACTAGGATCC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               3-493, gnl|bosTau2|chr14 (38052715-38052240)
               

               
               3-493, gnl|Hg17|chr8 (101334492-101333998)
               


               
               844-1039, gnl|bosTau2|chr14 (38051285-38051089)
               

               
               844-1039, gnl|Hg17|chr8 (101333651-101333408)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-493, gnl|bosTau2|chr14 (38052715-38052240)
               

               
               3-493, gnl|Hg17|chr8 (101334492-101333998)
               


               
               844-1039, gnl|bosTau2|chr14 (38051285-38051089)
               

               
               844-1039, gnl|Hg17|chr8 (101333651-101333408)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               spl (0.143184)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	3-493, gnl\|bosTau2\|chr14 (38052715-38052240)
	3-493, gnl\|Hg17\|chr8 (101334492-101333998)

	844-1039, gnl\|bosTau2\|chr14 (38051285-38051089)
	844-1039, gnl\|Hg17\|chr8 (101333651-101333408)