Ss1.1-Lng1-LNG010008G07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGGCTAGCCAGCGGCTTTCGGTCCCCTGCAGCTCGCAGTTGCCGCCCGAGCAGCCGCTG CAGGTGAAGGTGGTGGGGCTCTTCAAAAGCTCTAGCTTTCAAGTTGCGAAGAGCACCGCT GAGAGTCTGAAGAGAAATTATCCATCCAAATTTGAAGATCCTATAATAGTTCCTGTTCAA GAATTTGCATGGGATCAGTATCTACAGGAGAAAAAAAGGGAACTTAAAAATGAAATCTGG GAATATTCTTCCTATGTGATGTGTTTTATTAATGATCAGCTCCTGGGTGATGCACTTGAT CTTCAGAAATGGGCCCACAAGGTGTGGGATATAGTTGATTTTAAGCCCCCTGCACTTTAT GAAGCACTTACTTTGGATTATTCCACCAAATTCTTAAGAGACACCAAGCATGATTTTGTG TTTTTGGACATTTCTATTGATCTTTATCCAGTTGGAAGATTGATTTTTGAGTTATACTGT GATACGTGTCCCAAAACATGTAAAAATTTTCAGGTCTTGTGCACAGGAAAAGCAGGGTTT TCCCAAAGTGGCATCAGGCTACATTATGCAGGTTCCATTTTTCATCGAGTAGTACGGAAT GGTTGGGTACAAGGAGGAGATATAGTTGCTGGAAAAGGAGATAATGGAGAGTCAATTTAT GGACCAACATTTGAAGATGAAAACTTCTCAATTCCTCATAATAAAAGGGGAGTTCTTGGA ATGGTCAACAAAGGCCATCACAGCAATGGATCACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGGCTAGCCAGCGGCTTTCGGTCCCCTGCAGCTCGCAGTTGCCGCCCGAGCAGCCGCTG CAGGTGAAGGTGGTGGGGCTCTTCAAAAGCTCTAGCTTTCAAGTTGCGAAGAGCACCGCT GAGAGTCTGAAGAGAAATTATCCATCCAAATTTGAAGATCCTATAATAGTTCCTGTTCAA GAATTTGCATGGGATCAGTATCTACAGGAGAAAAAAAGGGAACTTAAAAATGAAATCTGG GAATATTCTTCCTATGTGATGTGTTTTATTAATGATCAGCTCCTGGGTGATGCACTTGAT CTTCAGAAATGGGCCCACAAGGTGTGGGATATAGTTGATTTTAAGCCCCCTGCACTTTAT GAAGCACTTACTTTGGATTATTCCACCAAATTCTTAAGAGACACCAAGCATGATTTTGTG TTTTTGGACATTTCTATTGATCTTTATCCAGTTGGAAGATTGATTTTTGAGTTATACTGT GATACGTGTCCCAAAACATGTAAAAATTTTCAGGTCTTGTGCACAGGAAAAGCAGGGTTT TCCCAAAGTGGCATCAGGCTACATTATGCAGGTTCCATTTTTCATCGAGTAGTACGGAAT GGTTGGGTACAAGGAGGAGATATAGTTGCTGGAAAAGGAGATAATGGAGAGTCAATTTAT GGACCAACATTTGAAGATGAAAACTTCTCAATTCCTCATAATAAAAGGGGAGTTCTTGGA ATGGTCAACAAAGGCCATCACAGCAATGGATCACAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-123, gnl|bosTau2|chr9 (23070800-23070678) | |
| 1-123, gnl|Hg17|chr6 (109868486-109868352) | |
| 1-123, gnl|Mm7|chr10 (41301142-41301282) | |
| 219-408, gnl|bosTau2|chr9 (23063401-23063212) | |
| 219-408, gnl|canFam2|chr12 (69376289-69376516) | |
| 219-408, gnl|danRer3|chr20 (42361709-42361488) | |
| 219-408, gnl|dasNov1|scaffold_5894 (18551-18324) | |
| 219-408, gnl|echTel1|scaffold_237930 (493-258) | |
| 219-408, gnl|fr1|chrUn (279196169-279195969) | |
| 219-408, gnl|hg17|chr6 (109859041-109859268) | |
| 219-408, gnl|Hg17|chr6 (109859242-109859053) | |
| 219-408, gnl|loxAfr1|scaffold_12646 (12247-12477) | |
| 219-408, gnl|mm7|chr10 (41309225-41309008) | |
| 219-408, gnl|Mm7|chr10 (41309022-41309211) | |
| 219-408, gnl|monDom2|scaffold_0 (110828587-110828367) | |
| 219-408, gnl|oryCun1|scaffold_173077 (127983-128210) | |
| 219-408, gnl|panTro1|chr5 (112172824-112173051) | |
| 219-408, gnl|rheMac2|chr4 (154478152-154477925) | |
| 219-408, gnl|rn3|chr20 (45483318-45483097) | |
| 219-408, gnl|tetNig1|chr14 (3334004-3333782) | |
| 219-408, gnl|xenTro1|scaffold_773 (441602-441826) | |
| 460-619, gnl|bosTau2|chr9 (23059689-23059531) | |
| 460-619, gnl|canFam2|chr12 (69372691-69372850) | |
| 460-619, gnl|danRer3|chr20 (42362449-42362287) | |
| 460-619, gnl|echTel1|scaffold_120194 (273-111) | |
| 460-619, gnl|fr1|chrUn (279196545-279196383) | |
| 460-619, gnl|hg17|chr6 (109854741-109854903) | |
| 460-619, gnl|Hg17|chr6 (109854902-109854743) | |
| 460-619, gnl|loxAfr1|scaffold_12646 (9187-9349) | |
| 460-619, gnl|mm7|chr10 (41312596-41312434) | |
| 460-619, gnl|Mm7|chr10 (41312433-41312592) | |
| 460-619, gnl|monDom2|scaffold_0 (110843681-110843519) | |
| 460-619, gnl|oryCun1|scaffold_173077 (124302-124464) | |
| 460-619, gnl|panTro1|chr5 (112168522-112168684) | |
| 460-619, gnl|rheMac2|chr4 (154482697-154482535) | |
| 460-619, gnl|rn3|chr20 (45484926-45484764) | |
| 460-619, gnl|tetNig1|chr14 (3334400-3334238) | |
| 460-619, gnl|xenTro1|scaffold_773 (437217-437377) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-123, gnl|bosTau2|chr9 (23070800-23070678) | |
| 1-123, gnl|Hg17|chr6 (109868486-109868352) | |
| 1-123, gnl|Mm7|chr10 (41301142-41301282) | |
| 219-408, gnl|bosTau2|chr9 (23063401-23063212) | |
| 219-408, gnl|canFam2|chr12 (69376289-69376516) | |
| 219-408, gnl|danRer3|chr20 (42361709-42361488) | |
| 219-408, gnl|dasNov1|scaffold_5894 (18551-18324) | |
| 219-408, gnl|echTel1|scaffold_237930 (493-258) | |
| 219-408, gnl|fr1|chrUn (279196169-279195969) | |
| 219-408, gnl|hg17|chr6 (109859041-109859268) | |
| 219-408, gnl|Hg17|chr6 (109859242-109859053) | |
| 219-408, gnl|loxAfr1|scaffold_12646 (12247-12477) | |
| 219-408, gnl|mm7|chr10 (41309225-41309008) | |
| 219-408, gnl|Mm7|chr10 (41309022-41309211) | |
| 219-408, gnl|monDom2|scaffold_0 (110828587-110828367) | |
| 219-408, gnl|oryCun1|scaffold_173077 (127983-128210) | |
| 219-408, gnl|panTro1|chr5 (112172824-112173051) | |
| 219-408, gnl|rheMac2|chr4 (154478152-154477925) | |
| 219-408, gnl|rn3|chr20 (45483318-45483097) | |
| 219-408, gnl|tetNig1|chr14 (3334004-3333782) | |
| 219-408, gnl|xenTro1|scaffold_773 (441602-441826) | |
| 460-619, gnl|bosTau2|chr9 (23059689-23059531) | |
| 460-619, gnl|canFam2|chr12 (69372691-69372850) | |
| 460-619, gnl|danRer3|chr20 (42362449-42362287) | |
| 460-619, gnl|echTel1|scaffold_120194 (273-111) | |
| 460-619, gnl|fr1|chrUn (279196545-279196383) | |
| 460-619, gnl|hg17|chr6 (109854741-109854903) | |
| 460-619, gnl|Hg17|chr6 (109854902-109854743) | |
| 460-619, gnl|loxAfr1|scaffold_12646 (9187-9349) | |
| 460-619, gnl|mm7|chr10 (41312596-41312434) | |
| 460-619, gnl|Mm7|chr10 (41312433-41312592) | |
| 460-619, gnl|monDom2|scaffold_0 (110843681-110843519) | |
| 460-619, gnl|oryCun1|scaffold_173077 (124302-124464) | |
| 460-619, gnl|panTro1|chr5 (112168522-112168684) | |
| 460-619, gnl|rheMac2|chr4 (154482697-154482535) | |
| 460-619, gnl|rn3|chr20 (45484926-45484764) | |
| 460-619, gnl|tetNig1|chr14 (3334400-3334238) | |
| 460-619, gnl|xenTro1|scaffold_773 (437217-437377) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.831255) | |
| tra (0.123092) |