Ss1.1-Lng1-LNG010023H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCAAGATGGCGGCCATGGAGACCGAGTCGGCGCCGCTGACCCTAGAATCGCTGCCCAC CGATCCCCTGCTTCTCATCTTATCCTTCTTGGACTACCGGGACCTAATCAATTGTTGCTA TGTCAGTCGAAGACTTAGCCAGCTATCAAGTCACGATCCACTGTGGAGAAGACATTGCAA AAAATATTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAACCAATGTTGGAAATCCCT CTTCATTGACACTTACTCTGATGTAGGAAGATATATTGACCATTATGCTGCTATTAAAAA GGCCTGGGATGATCTCAAGAAATATTTGGAACCCAGATGTCCTCGGATGGTTTTATCTCT GAAAGAAGGTGCTCGAGAGGAAGATCTAGATGCTGTGGAAGCACAGATCGGCTGCAAGCT TCCGGATGATTATCGATGTTCGTATCGTATCCACAATGGGCAGAAATTAGTGGTTCCTGG GTTGTTGGGAAGCATGGCGCTGTCCAATCACTATCGTTCCGAGGACTTGTTAGATGTCGA CACGGCTGCTGGAGGGTTCCAGCAGAGGCAGGGACTGAAGTACTGTCTCCCTTTGACTTT TTGCATACACACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCGGAGGGCAGAAACAA AAATGAAGTCTTCTACCAATGTCCGGACCAAATGGCTCGGAATCCAGCAGCTATTGACAT GTTTATCATAGGTGCTACTTTTACTGACTGGTTTACTTCTTATGTCAACAATGTTGTATC TGGCGGTTTCCCTATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGATTGTGT AGCAACAACTGGGGATATTACAGTTTCAGTTTCCACATCGTTTCTGCCAGAGCTTAGCTC TGTACATCCGCCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGC ACTTCCCGAGAAGGCTTGTCAATTAGACAGTCGCTACTGGAGAATAACAAATGCTAAAGG TGATGTGGAAGAAGTGCAAGGACCTGGAGTAGTTGGTGAATTTCCCATCATCAGCCCAGG CCGGGTGTATGAATACACAAGTTGTACCACTTTCTCTACAACATCAGGATACATGGAAGG ATATTACACCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCAAGATGGCGGCCATGGAGACCGAGTCGGCGCCGCTGACCCTAGAATCGCTGCCCAC CGATCCCCTGCTTCTCATCTTATCCTTCTTGGACTACCGGGACCTAATCAATTGTTGCTA TGTCAGTCGAAGACTTAGCCAGCTATCAAGTCACGATCCACTGTGGAGAAGACATTGCAA AAAATATTGGCTGATATCTGAGGAAGAGAAAACACAGAAGAACCAATGTTGGAAATCCCT CTTCATTGACACTTACTCTGATGTAGGAAGATATATTGACCATTATGCTGCTATTAAAAA GGCCTGGGATGATCTCAAGAAATATTTGGAACCCAGATGTCCTCGGATGGTTTTATCTCT GAAAGAAGGTGCTCGAGAGGAAGATCTAGATGCTGTGGAAGCACAGATCGGCTGCAAGCT TCCGGATGATTATCGATGTTCGTATCGTATCCACAATGGGCAGAAATTAGTGGTTCCTGG GTTGTTGGGAAGCATGGCGCTGTCCAATCACTATCGTTCCGAGGACTTGTTAGATGTCGA CACGGCTGCTGGAGGGTTCCAGCAGAGGCAGGGACTGAAGTACTGTCTCCCTTTGACTTT TTGCATACACACTGGTTTGAGTCAGTACATAGCAGTGGAAGCTGCGGAGGGCAGAAACAA AAATGAAGTCTTCTACCAATGTCCGGACCAAATGGCTCGGAATCCAGCAGCTATTGACAT GTTTATCATAGGTGCTACTTTTACTGACTGGTTTACTTCTTATGTCAACAATGTTGTATC TGGCGGTTTCCCTATCATCAGAGACCAAATTTTCAGATATGTTCACGATCCAGATTGTGT AGCAACAACTGGGGATATTACAGTTTCAGTTTCCACATCGTTTCTGCCAGAGCTTAGCTC TGTACATCCGCCCCACTATTTCTTCACATACCGAATCAGGATTGAAATGTCAAAAGATGC ACTTCCCGAGAAGGCTTGTCAATTAGACAGTCGCTACTGGAGAATAACAAATGCTAAAGG TGATGTGGAAGAAGTGCAAGGACCTGGAGTAGTTGGTGAATTTCCCATCATCAGCCCAGG CCGGGTGTATGAATACACAAGTTGTACCACTTTCTCTACAACATCAGGATACATGGAAGG ATATTACACCTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-111, gnl|bosTau2|chr15 (38666531-38666421) | |
| 1-111, gnl|canFam2|chr18 (36964302-36964233) | |
| 1-111, gnl|dasNov1|scaffold_145581 (758-689) | |
| 1-111, gnl|echTel1|scaffold_276791 (862-793) | |
| 1-111, gnl|fr1|chrUn (171918140-171918071) | |
| 1-111, gnl|hg17|chr11 (33752514-33752583) | |
| 1-111, gnl|Hg17|chr11 (33752626-33752516) | |
| 1-111, gnl|loxAfr1|scaffold_23588 (16200-16269) | |
| 1-111, gnl|mm7|chr2 (103878757-103878688) | |
| 1-111, gnl|Mm7|chr2 (103878643-103878753) | |
| 1-111, gnl|monDom2|scaffold_10 (80034562-80034627) | |
| 1-111, gnl|oryCun1|scaffold_202283 (178631-178700) | |
| 1-111, gnl|panTro1|chr9 (34136677-34136746) | |
| 1-111, gnl|rheMac2|chr14 (38059111-38059042) | |
| 1-111, gnl|rn3|chr3 (89375951-89376020) | |
| 1-111, gnl|tetNig1|chr3 (1189810-1189748) | |
| 195-365, gnl|bosTau2|chr15 (38659789-38659619) | |
| 195-365, gnl|Hg17|chr11 (33747143-33746973) | |
| 195-365, gnl|Mm7|chr2 (103884377-103884546) | |
| 473-684, gnl|bosTau2|chr15 (38646908-38646697) | |
| 473-684, gnl|Hg17|chr11 (33734108-33733894) | |
| 473-684, gnl|Mm7|chr2 (103896434-103896648) | |
| 807-953, gnl|bosTau2|chr15 (38641588-38641441) | |
| 807-953, gnl|Hg17|chr11 (33728794-33728647) | |
| 807-953, gnl|Mm7|chr2 (103901912-103902057) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-111, gnl|bosTau2|chr15 (38666531-38666421) | |
| 1-111, gnl|canFam2|chr18 (36964302-36964233) | |
| 1-111, gnl|dasNov1|scaffold_145581 (758-689) | |
| 1-111, gnl|echTel1|scaffold_276791 (862-793) | |
| 1-111, gnl|fr1|chrUn (171918140-171918071) | |
| 1-111, gnl|hg17|chr11 (33752514-33752583) | |
| 1-111, gnl|Hg17|chr11 (33752626-33752516) | |
| 1-111, gnl|loxAfr1|scaffold_23588 (16200-16269) | |
| 1-111, gnl|mm7|chr2 (103878757-103878688) | |
| 1-111, gnl|Mm7|chr2 (103878643-103878753) | |
| 1-111, gnl|monDom2|scaffold_10 (80034562-80034627) | |
| 1-111, gnl|oryCun1|scaffold_202283 (178631-178700) | |
| 1-111, gnl|panTro1|chr9 (34136677-34136746) | |
| 1-111, gnl|rheMac2|chr14 (38059111-38059042) | |
| 1-111, gnl|rn3|chr3 (89375951-89376020) | |
| 1-111, gnl|tetNig1|chr3 (1189810-1189748) | |
| 195-365, gnl|bosTau2|chr15 (38659789-38659619) | |
| 195-365, gnl|Hg17|chr11 (33747143-33746973) | |
| 195-365, gnl|Mm7|chr2 (103884377-103884546) | |
| 473-684, gnl|bosTau2|chr15 (38646908-38646697) | |
| 473-684, gnl|Hg17|chr11 (33734108-33733894) | |
| 473-684, gnl|Mm7|chr2 (103896434-103896648) | |
| 807-953, gnl|bosTau2|chr15 (38641588-38641441) | |
| 807-953, gnl|Hg17|chr11 (33728794-33728647) | |
| 807-953, gnl|Mm7|chr2 (103901912-103902057) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) |