Non-Coding RNA Search

Ss1.1-Lng1-LNG010024G02.5

Sequence:


               
               TTGAAAGGAGACATGGTGAAGATTTACACGAAGATGAGCGCCAACGGCTGGTGGCGAGGA
GAAGTGAACGGCAGGGTGGGCTGGTTTCCATCCACGTATGTGGAAGAGGATGAATAGTCT
CCCCTCCAGCGTTGCACCCCCACACCAGGAATTTCAGAGACGGGATCCACAGAAGGCTGT
GCAGCGTTATGAATTCACTCAAGTGTTTAAAAAGCTGTCTTTCTGGCTATTCAACATCCT
CCCTCCTCTGCCCTCCTAAGTCTTAATGCTGGGATTTCTAAAGATGCCGGGACTGACAGA
TGAATGGCTCGCCTAGAGCTGTGCAAGAAACAGCCTGCCTGTCTGGCATCGTCAGGGACC
AGGGCAAAGTCAAAAGCGTTTCTTCCCAAAAGAGCCCTGCGAGCACAATGGTTCGTGTTT
CTTTTAACTTGGTCCAGCCAGATGCCATGAGTGCCAGCCATTAGTAAACAGTGAACGTGT
ATTTACTTTGCTCATGTGCCGTTCGCCAGCATTTTTGATGGTACAGCAAGTAGAAGTTTA
ATTTTGCCTTGCCCAGCATGAAGAACCTGGAGAGTGCTGCCACTGGGGCAGCTTAATGGA
GAAATCCAGCATTACTTGTCTTAAACTCCCTCACAAGGCGACTCACTGCCCGGCAGCCAC
TGTCACCCGCAGATGTTACTCATGTTAAAATATAGGAGGCAGATGCTCAGGTGTGCTTCA
TAAGTGATACACTGGGTGGGGGGGGTGTCAGTTATTCATCTGATGTCCTGATGATACGTG
CAAACTTTTTCAGAAGAGACACACACAAGAGCGTGCGTACAAGAGAGGGCCTTCATATGC
AATCTTCACAACCTTCGTGATTTCATAGGGTTATTTTGCAAATTCAGTGCTTCACTTTAT
GAGATCTTGGCTGGGTATGTTTTAGGTTGTTCCAGGTAACCGATGCTAAGGTGGCACTAT
TTGCAGAAACAGACCCAGGGCTGTGATTTAAAGTAAGCCAATTTAGAGAAGCTACATCTG
TTAACACATACCTCCCTCCCCCACTACCCTTCTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAAAGGAGACATGGTGAAGATTTACACGAAGATGAGCGCCAACGGCTGGTGGCGAGGA
GAAGTGAACGGCAGGGTGGGCTGGTTTCCATCCACGTATGTGGAAGAGGATGAATAGTCT
CCCCTCCAGCGTTGCACCCCCACACCAGGAATTTCAGAGACGGGATCCACAGAAGGCTGT
GCAGCGTTATGAATTCACTCAAGTGTTTAAAAAGCTGTCTTTCTGGCTATTCAACATCCT
CCCTCCTCTGCCCTCCTAAGTCTTAATGCTGGGATTTCTAAAGATGCCGGGACTGACAGA
TGAATGGCTCGCCTAGAGCTGTGCAAGAAACAGCCTGCCTGTCTGGCATCGTCAGGGACC
AGGGCAAAGTCAAAAGCGTTTCTTCCCAAAAGAGCCCTGCGAGCACAATGGTTCGTGTTT
CTTTTAACTTGGTCCAGCCAGATGCCATGAGTGCCAGCCATTAGTAAACAGTGAACGTGT
ATTTACTTTGCTCATGTGCCGTTCGCCAGCATTTTTGATGGTACAGCAAGTAGAAGTTTA
ATTTTGCCTTGCCCAGCATGAAGAACCTGGAGAGTGCTGCCACTGGGGCAGCTTAATGGA
GAAATCCAGCATTACTTGTCTTAAACTCCCTCACAAGGCGACTCACTGCCCGGCAGCCAC
TGTCACCCGCAGATGTTACTCATGTTAAAATATAGGAGGCAGATGCTCAGGTGTGCTTCA
TAAGTGATACACTGGGTGGGGGGGGTGTCAGTTATTCATCTGATGTCCTGATGATACGTG
CAAACTTTTTCAGAAGAGACACACACAAGAGCGTGCGTACAAGAGAGGGCCTTCATATGC
AATCTTCACAACCTTCGTGATTTCATAGGGTTATTTTGCAAATTCAGTGCTTCACTTTAT
GAGATCTTGGCTGGGTATGTTTTAGGTTGTTCCAGGTAACCGATGCTAAGGTGGCACTAT
TTGCAGAAACAGACCCAGGGCTGTGATTTAAAGTAAGCCAATTTAGAGAAGCTACATCTG
TTAACACATACCTCCCTCCCCCACTACCCTTCTTCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               75-1056, gnl|bosTau2|chr3 (29628917-29629919)
               

               
               75-1056, gnl|Hg17|chr1 (107828037-107827058)
               

               
               75-1056, gnl|Mm7|chr3 (109501855-109502811)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-1056, gnl|bosTau2|chr3 (29628917-29629919)
               

               
               75-1056, gnl|Hg17|chr1 (107828037-107827058)
               

               
               75-1056, gnl|Mm7|chr3 (109501855-109502811)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               cki (0.660939)
               

               
               nco (0.485201)
               

               
               rec (0.346141)
               

               
               spl (0.286369)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.660939)
               

               
               nco (0.485201)
               

               
               rec (0.346141)
               

               
               spl (0.286369)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)

	75-1056, gnl\|bosTau2\|chr3 (29628917-29629919)
	75-1056, gnl\|Hg17\|chr1 (107828037-107827058)
	75-1056, gnl\|Mm7\|chr3 (109501855-109502811)

	cki (0.660939)
	nco (0.485201)
	rec (0.346141)
	spl (0.286369)
	lnt (0.142308)
	kid (0.129735)