Ss1.1-Lng1-LNG010025E03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGAGTTGCTGCCGCTTCAGAAGCTGAGAGGAGCAGGGAGGATGGAACTGCAGGATCCGA AGATGAATGGAGCCCTCCCCCGGGGTGCTGTGGACTACAGGCAGGAGCGAGAGGGCTTCC TGCCCAGCCATAGTCCTGCTCCAGGGAGGAAGCCAACCCAGTTCATGGATTTCGAGGGGA AGACATCGTTTGCCCCCGGGGTGCTGTGGACTACAGGCAGGAGCGAGAGGGCTTCCTGCC CAGCCATAGTCCTGCTCCAGGGAGGAAGCCAACCCAGTTCATGGATGGCCCTGCTGCTCT GCATTGCTCTTCTGTCTTCGTACTCCATCCATCTCCTGCTGACCTGTGCTGGTGTTGTAG GCATCCGAGCCTATGAACAGCTGGGACAGAGGGCGCTGGGGCCTGCGGGGAAGGTAGTGG TGGCCGCGGTCATCTGTCTGCACAATGTTGGGGCCATGTCCAGTTACCTGTTCATCATCA AATCCGAACTCCCCCTGGTTATCGGCACTTTCCTGGACATGGACCCTGAGGGGGACTGGT TCTTGAAAGGAAACCTCCTCATCATTATCGTCAGTGTGTTAATCATCCTGCCGCTGGCCC TCATGAGACACTTGGGCTACCTGGGGTATACCAGTGGTCTCTCTCTGACCTGTATGCTGT TTTTCCTCATTTCGGTCATCTATAAGAAGTTCCAGCTTGGCTGTGTCATAGGCCACAATG AGACGGCCGTGGAGAGTAAGGGCCCCTCAAGCCTTCCCACCCAGGGGCTCAACACAAGCT GTGAAGCCCAGATGTTCACAGCTGACTCACAGATGTTCTACACAGTGCCCATCATGGCTT TCGCCTTCGTCTGCCACCCCGAGGTGCTGCCCATCTACACGGAACTTTGCCGGCCCTCCA AGCGCAGAATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGCGC TCACAGCCACCTTTGGATACCTCACCTTCTACAGCAGCGTGGAGGCAGAGATGCTGCACA TGTACAGCCAACAGGACCTGCTCATCCTCTGTGTGCGCCTTGCCGTGCTGCTCGCTGTGA CTCTCACTGTGCCAGTTGTGCTGTTCCCTATCCGCCGGGCTCTGCAGCAACTGCTCTTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGAGTTGCTGCCGCTTCAGAAGCTGAGAGGAGCAGGGAGGATGGAACTGCAGGATCCGA AGATGAATGGAGCCCTCCCCCGGGGTGCTGTGGACTACAGGCAGGAGCGAGAGGGCTTCC TGCCCAGCCATAGTCCTGCTCCAGGGAGGAAGCCAACCCAGTTCATGGATTTCGAGGGGA AGACATCGTTTGCCCCCGGGGTGCTGTGGACTACAGGCAGGAGCGAGAGGGCTTCCTGCC CAGCCATAGTCCTGCTCCAGGGAGGAAGCCAACCCAGTTCATGGATGGCCCTGCTGCTCT GCATTGCTCTTCTGTCTTCGTACTCCATCCATCTCCTGCTGACCTGTGCTGGTGTTGTAG GCATCCGAGCCTATGAACAGCTGGGACAGAGGGCGCTGGGGCCTGCGGGGAAGGTAGTGG TGGCCGCGGTCATCTGTCTGCACAATGTTGGGGCCATGTCCAGTTACCTGTTCATCATCA AATCCGAACTCCCCCTGGTTATCGGCACTTTCCTGGACATGGACCCTGAGGGGGACTGGT TCTTGAAAGGAAACCTCCTCATCATTATCGTCAGTGTGTTAATCATCCTGCCGCTGGCCC TCATGAGACACTTGGGCTACCTGGGGTATACCAGTGGTCTCTCTCTGACCTGTATGCTGT TTTTCCTCATTTCGGTCATCTATAAGAAGTTCCAGCTTGGCTGTGTCATAGGCCACAATG AGACGGCCGTGGAGAGTAAGGGCCCCTCAAGCCTTCCCACCCAGGGGCTCAACACAAGCT GTGAAGCCCAGATGTTCACAGCTGACTCACAGATGTTCTACACAGTGCCCATCATGGCTT TCGCCTTCGTCTGCCACCCCGAGGTGCTGCCCATCTACACGGAACTTTGCCGGCCCTCCA AGCGCAGAATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGCGC TCACAGCCACCTTTGGATACCTCACCTTCTACAGCAGCGTGGAGGCAGAGATGCTGCACA TGTACAGCCAACAGGACCTGCTCATCCTCTGTGTGCGCCTTGCCGTGCTGCTCGCTGTGA CTCTCACTGTGCCAGTTGTGCTGTTCCCTATCCGCCGGGCTCTGCAGCAACTGCTCTTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 665-812, gnl|bosTau2|chrX (25698469-25698616) | |
| 665-812, gnl|Hg17|chrX (48076794-48076647) | |
| 665-812, gnl|Mm7|chrX (6709880-6710018) | |
| 994-1109, gnl|bosTau2|chrX (25699913-25700028) | |
| 994-1109, gnl|canFam2|chr20 (42110644-42110784) | |
| 994-1109, gnl|danRer3|chr8 (15743318-15743452) | |
| 994-1109, gnl|dasNov1|scaffold_165067 (772-903) | |
| 994-1109, gnl|echTel1|scaffold_260053 (2456-2321) | |
| 994-1109, gnl|fr1|chrUn (280223400-280223538) | |
| 994-1109, gnl|hg17|chrX (48075282-48075413) | |
| 994-1109, gnl|Hg17|chrX (48075404-48075289) | |
| 994-1109, gnl|loxAfr1|scaffold_6646 (84735-84607) | |
| 994-1109, gnl|mm7|chrX (6711303-6711172) | |
| 994-1109, gnl|Mm7|chrX (6711179-6711294) | |
| 994-1109, gnl|monDom2|scaffold_134 (361240-361121) | |
| 994-1109, gnl|oryCun1|scaffold_191838 (35505-35374) | |
| 994-1109, gnl|panTro1|chrX (49389490-49389621) | |
| 994-1109, gnl|rheMac2|chrX (46309839-46309970) | |
| 994-1109, gnl|rn3|chrX (26299920-26300051) | |
| 994-1109, gnl|tetNig1|chrUn_random (92977192-92977043) | |
| 994-1109, gnl|xenTro1|scaffold_189 (586363-586219) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 665-812, gnl|bosTau2|chrX (25698469-25698616) | |
| 665-812, gnl|Hg17|chrX (48076794-48076647) | |
| 665-812, gnl|Mm7|chrX (6709880-6710018) | |
| 994-1109, gnl|bosTau2|chrX (25699913-25700028) | |
| 994-1109, gnl|canFam2|chr20 (42110644-42110784) | |
| 994-1109, gnl|danRer3|chr8 (15743318-15743452) | |
| 994-1109, gnl|dasNov1|scaffold_165067 (772-903) | |
| 994-1109, gnl|echTel1|scaffold_260053 (2456-2321) | |
| 994-1109, gnl|fr1|chrUn (280223400-280223538) | |
| 994-1109, gnl|hg17|chrX (48075282-48075413) | |
| 994-1109, gnl|Hg17|chrX (48075404-48075289) | |
| 994-1109, gnl|loxAfr1|scaffold_6646 (84735-84607) | |
| 994-1109, gnl|mm7|chrX (6711303-6711172) | |
| 994-1109, gnl|Mm7|chrX (6711179-6711294) | |
| 994-1109, gnl|monDom2|scaffold_134 (361240-361121) | |
| 994-1109, gnl|oryCun1|scaffold_191838 (35505-35374) | |
| 994-1109, gnl|panTro1|chrX (49389490-49389621) | |
| 994-1109, gnl|rheMac2|chrX (46309839-46309970) | |
| 994-1109, gnl|rn3|chrX (26299920-26300051) | |
| 994-1109, gnl|tetNig1|chrUn_random (92977192-92977043) | |
| 994-1109, gnl|xenTro1|scaffold_189 (586363-586219) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cbr (3.71129) | |
| nlu (0.191681) | |
| nco (0.161734) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbr (3.71129) | |
| nlu (0.191681) | |
| nco (0.161734) | |
| ecc (0.115035) |