Non-Coding RNA Search

Ss1.1-Lng1-LNG010027H09.5

Sequence:


               
               TATTGGCCTACGGTTCTTTATAGACAAACACACACACATATAGGCATGAATGTGTGATTG
TATTCCATACAGAACCTGCACAGATCAGAAGCCTGAAACTATCTTTATCTTATGTGGGAA
TTGACACGCTTTGTGGTCAGGAAAGCTGGTCTTCTCACACCAAGGTCAAGTGTGGCTGTA
GGAGGCGGAGCCTGCAGGTGCAGCAGCATGTGGAGGGTACTTCTGACGCCCCCCTTCTCT
CGAGGAAGAGAGTGTCCTATCCCAGTCGGCGTTCCCATCTTCCCCCCTGGACAACCTCAG
ACTTTTAATGGCTTCGAGGTTTAGACCACATGTGCAAGTGTGAGATATTTCTCTTCTCAA
TTTTTTTTTGTGGTGTATGATAGGAAGTCATTATTTTAATTCTTGGAGATGAATTTGTTT
ACAGTATTAAATTACACATGACGGAAATGAGAAGGGTTGACGTCAAAGGTCATGTGAAAA
GATTGAGAGGTGGGTTTAACAATTCAAATTAGATTGAAAGCTGTTAATGGGTGGCCTTGA
AGGTCGGAGACACCTCAAGCCTAGTGGAGAGAAACAAGGGGACAGAAGAGACAGAGGGGC
TACTTCAAGAGTTCCAAATATTATTCTGACTAATAGTTCAATACAAATTTTATTTTACTG
CTGGGTTTATAAAGCCGATCACAGATCTGTCAGACCACGTTAGAAGCAGGAAGAGGAGAA
AACAAGATCCCTTTTATTGTAGTCTAGATCCTTGGGTGACATTTTATTCCTTCCACCTTC
ACAGGTATAAATGTAGATATAGATATAAATGGAAAAATGGTCAGAGGCTTGAGATCATAG
TAAACATGCCAATTTGTCACTAAGCTTTGTTTTTAATTAATTTTTTCCTATCAGTTTTAT
TGTGTTATGATTGACATACAACATTGGAGAAGTTTAAGATATAAAGCATGGGGAGTTCCC
TTGAGGTGCAGCGGGTTAAGGATCCGGTGTTGTCACTGAAATGGCTCGGGTCGCTAATGT
GGTGCAGACTGAATCTCTGGCCCAGGAACTGCCTCGGGTGCAGCGGAAAAAAAAAAAAAA
AAAGATATACAGCATAATTATTTAATTTACATACATCATTAAATGATTATTACAAGTTTA
GTGAACATCTGTCATCTCAGATAGATACAAAATTAAAGAAATAGAAAAAAATATTTTTTC
CTTGTGATGAGAACTCTTAGGATTTAATTGCTTAACAACTTTTCTATATAACATACAACC
GTGTTAATTATATTTATCATGTCACACATCATCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTGGCCTACGGTTCTTTATAGACAAACACACACACATATAGGCATGAATGTGTGATTG
TATTCCATACAGAACCTGCACAGATCAGAAGCCTGAAACTATCTTTATCTTATGTGGGAA
TTGACACGCTTTGTGGTCAGGAAAGCTGGTCTTCTCACACCAAGGTCAAGTGTGGCTGTA
GGAGGCGGAGCCTGCAGGTGCAGCAGCATGTGGAGGGTACTTCTGACGCCCCCCTTCTCT
CGAGGAAGAGAGTGTCCTATCCCAGTCGGCGTTCCCATCTTCCCCCCTGGACAACCTCAG
ACTTTTAATGGCTTCGAGGTTTAGACCACATGTGCAAGTGTGAGATATTTCTCTTCTCAA
TTTTTTTTTGTGGTGTATGATAGGAAGTCATTATTTTAATTCTTGGAGATGAATTTGTTT
ACAGTATTAAATTACACATGACGGAAATGAGAAGGGTTGACGTCAAAGGTCATGTGAAAA
GATTGAGAGGTGGGTTTAACAATTCAAATTAGATTGAAAGCTGTTAATGGGTGGCCTTGA
AGGTCGGAGACACCTCAAGCCTAGTGGAGAGAAACAAGGGGACAGAAGAGACAGAGGGGC
TACTTCAAGAGTTCCAAATATTATTCTGACTAATAGTTCAATACAAATTTTATTTTACTG
CTGGGTTTATAAAGCCGATCACAGATCTGTCAGACCACGTTAGAAGCAGGAAGAGGAGAA
AACAAGATCCCTTTTATTGTAGTCTAGATCCTTGGGTGACATTTTATTCCTTCCACCTTC
ACAGGTATAAATGTAGATATAGATATAAATGGAAAAATGGTCAGAGGCTTGAGATCATAG
TAAACATGCCAATTTGTCACTAAGCTTTGTTTTTAATTAATTTTTTCCTATCAGTTTTAT
TGTGTTATGATTGACATACAACATTGGAGAAGTTTAAGATATAAAGCATGGGGAGTTCCC
TTGAGGTGCAGCGGGTTAAGGATCCGGTGTTGTCACTGAAATGGCTCGGGTCGCTAATGT
GGTGCAGACTGAATCTCTGGCCCAGGAACTGCCTCGGGTGCAGCGGAAAAAAAAAAAAAA
AAAGATATACAGCATAATTATTTAATTTACATACATCATTAAATGATTATTACAAGTTTA
GTGAACATCTGTCATCTCAGATAGATACAAAATTAAAGAAATAGAAAAAAATATTTTTTC
CTTGTGATGAGAACTCTTAGGATTTAATTGCTTAACAACTTTTCTATATAACATACAACC
GTGTTAATTATATTTATCATGTCACACATCATCTCT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1082-1291, gnl|bosTau2|chr1 (65155233-65155441)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1082-1291, gnl|bosTau2|chr1 (65155233-65155441)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               tra (0.123092)