Non-Coding RNA Search

Ss1.1-Lng1-LNG010028D11.5

Sequence:


               
               CTGGAATATGAATGACTTGGGCACTATCTGTTTAGCAAATTAAATGAGGCTCAAGTAAAA
TTAATAGGCCGTGCACCTGTGCCGGAATTTCCCAAGAAATATCAAAAGTTCATTTCCTGA
AAGTCAGTTAAATACAGTGTGATGATTTTTCGTAGAAGAAATATAAATTTAAGGAACTCT
ACAGTGTCAAGAGGACTGAGGCTCTGAGGGAAAGGAAATTGATCCAGAATATCCTAAAGA
ATGGTGCTGTAAAAGGTCACATTTTCCTCACTTTTAAGAATTCTAGACAGAAATGAACCA
TCTGCTGAGTAGCCAAGCCTTTAATTTCCTATGTTTATGTAGAAAGAATGAACATACAAA
TGCCACAACCTGTGTCAAAGAAATGGAACCTAAAACACAGATTGCAATCTGAGTTTGAGA
GTTAATGGCCCAGCCTTTACTACTGCTGGGCAGTACAGGTGGAGTAGGTAGTCTTCCTGT
CACTAGAGCCTGGAGCATGCATGACTAACACACATGCTACTAACCAAATGTGAACATTAG
ACTGGTTCTGCCCCTCTCATGTCTAACCTGGAAATGTTTCACAGAGGTTTCCCTTGATTC
TTCTAAGATGGCACTGAATTGCATTTAAGCTGGAAATTTCATTTTCCAGGCCCACCTGTC
ATTTCTTTACCCAGCTAGAAAAATGGTAGCTTGAAGACTGTTAGCATGTACCTGCTGCCT
TACACATTGTATAGACTCACCACATTGCCCTTGGAGACACAACTGTCACCGTGGAAACTA
GAGCAAATCCCTTCCTCTCTTCCCTCCTTTGTGAATGAGGGGTGGATGAGATCATCTGTC
TCCAAGCACTAAAATGAGGTGATGCTATAAGAAAAACTTTTAGGAGTTCTCGTCGTGGCT
CAGTGCTTAACGAATCCGACTAGGAACCATGAGGTTTCGAGTTTGACCCCGGCCTTGCTT
AGTGGGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTAGGTCACAGATGCAGCTCGGA
TCCCGCATTGCTGTGACTCTGGTGTAGACCAGCAGCTACAGCTCCAATTGGACCCCTAGC
CTAGGAACCTCTATATGCCAAGGGTACAGGCCTAGAAAAGACAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAATATGAATGACTTGGGCACTATCTGTTTAGCAAATTAAATGAGGCTCAAGTAAAA
TTAATAGGCCGTGCACCTGTGCCGGAATTTCCCAAGAAATATCAAAAGTTCATTTCCTGA
AAGTCAGTTAAATACAGTGTGATGATTTTTCGTAGAAGAAATATAAATTTAAGGAACTCT
ACAGTGTCAAGAGGACTGAGGCTCTGAGGGAAAGGAAATTGATCCAGAATATCCTAAAGA
ATGGTGCTGTAAAAGGTCACATTTTCCTCACTTTTAAGAATTCTAGACAGAAATGAACCA
TCTGCTGAGTAGCCAAGCCTTTAATTTCCTATGTTTATGTAGAAAGAATGAACATACAAA
TGCCACAACCTGTGTCAAAGAAATGGAACCTAAAACACAGATTGCAATCTGAGTTTGAGA
GTTAATGGCCCAGCCTTTACTACTGCTGGGCAGTACAGGTGGAGTAGGTAGTCTTCCTGT
CACTAGAGCCTGGAGCATGCATGACTAACACACATGCTACTAACCAAATGTGAACATTAG
ACTGGTTCTGCCCCTCTCATGTCTAACCTGGAAATGTTTCACAGAGGTTTCCCTTGATTC
TTCTAAGATGGCACTGAATTGCATTTAAGCTGGAAATTTCATTTTCCAGGCCCACCTGTC
ATTTCTTTACCCAGCTAGAAAAATGGTAGCTTGAAGACTGTTAGCATGTACCTGCTGCCT
TACACATTGTATAGACTCACCACATTGCCCTTGGAGACACAACTGTCACCGTGGAAACTA
GAGCAAATCCCTTCCTCTCTTCCCTCCTTTGTGAATGAGGGGTGGATGAGATCATCTGTC
TCCAAGCACTAAAATGAGGTGATGCTATAAGAAAAACTTTTAGGAGTTCTCGTCGTGGCT
CAGTGCTTAACGAATCCGACTAGGAACCATGAGGTTTCGAGTTTGACCCCGGCCTTGCTT
AGTGGGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTAGGTCACAGATGCAGCTCGGA
TCCCGCATTGCTGTGACTCTGGTGTAGACCAGCAGCTACAGCTCCAATTGGACCCCTAGC
CTAGGAACCTCTATATGCCAAGGGTACAGGCCTAGAAAAGACAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-404, gnl|bosTau2|chr10 (30905602-30906001)
               

               
               1-404, gnl|Hg17|chr15 (61143646-61144324)
               

               
               1-404, gnl|Mm7|chr9 (67060882-67060441)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-404, gnl|bosTau2|chr10 (30905602-30906001)
               

               
               1-404, gnl|Hg17|chr15 (61143646-61144324)
               

               
               1-404, gnl|Mm7|chr9 (67060882-67060441)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               cty (0.20816)
               

               
               mga (0.160205)
               

               
               hlv (0.139256)
               

               
               che (0.136314)
               

               
               ese (0.126502)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)
               

               
               mga (0.160205)
               

               
               hlv (0.139256)
               

               
               che (0.136314)
               

               
               ese (0.126502)

	1-404, gnl\|bosTau2\|chr10 (30905602-30906001)
	1-404, gnl\|Hg17\|chr15 (61143646-61144324)
	1-404, gnl\|Mm7\|chr9 (67060882-67060441)

	cty (0.20816)
	mga (0.160205)
	hlv (0.139256)
	che (0.136314)
	ese (0.126502)