Non-Coding RNA Search

Ss1.1-Lng1-LNG010030D07.5

Sequence:


               
               AGCATTGTGTAAGATAATGTTCGTACTTCTTTCTGGTTTAATAATTTATTTTTTTTTTGC
ACTACTGTATCCTTTTTTTCCCTACATGTATGTTTGTAACTATTTAAGTGTGCAGTACTG
AAAAGTCAGTCCCTCTATTTATTGCCATGGTTTCTTGTGTACCAAGGGGGAAGTAACAAT
ATTAGAAATGTGTCCTTTTGCTTTCACGGTTTTTGCTGCATTTGATCCCAGTTCTTGAAC
CTTTCTTGCATCCATCCCGTTGGATGCTTAAAGGAAGTTCAGAACCGTGCTTGGATCATC
TGTCTCTGCAGATTCGATTTTGTTTTCGTTTTGAATCCAACAATATAAAATACTGAAGGG
ATTTGGCATAGGCTATGGAATAAGCCAGGGTAAAGTAATCCATTTTCTATGTGTTATACA
GAGCCAGGACGAAGGAATTATTTTTCTGGCATCAAGAGATGAATTAGAGGAGTGTCTTTT
CTTGCAGTCTCTTCTAGGCATTTATTTCAGCAATCAGATTGTATCTTAATTTCTCCCCAA
TGCAGTTAGGAATGGGGTTTTTAGGGGGGATACTACTTAAGCCTTCAGAGATAATGGTTT
TTAGTCTGGCACATCACAGCCCTGCCCTGTGAGCCTCCGTACCCGTACCTCTTCCTGGTG
TCCTGAGGATCAGGACCCGGCTAGCACCTGTGGAAACACTTGATGAAGACTGTTTATTAT
TAAAAGTGTAAAGAAGCCCAGGGGAAAAAAAGGTAGAACCCTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATTGTGTAAGATAATGTTCGTACTTCTTTCTGGTTTAATAATTTATTTTTTTTTTGC
ACTACTGTATCCTTTTTTTCCCTACATGTATGTTTGTAACTATTTAAGTGTGCAGTACTG
AAAAGTCAGTCCCTCTATTTATTGCCATGGTTTCTTGTGTACCAAGGGGGAAGTAACAAT
ATTAGAAATGTGTCCTTTTGCTTTCACGGTTTTTGCTGCATTTGATCCCAGTTCTTGAAC
CTTTCTTGCATCCATCCCGTTGGATGCTTAAAGGAAGTTCAGAACCGTGCTTGGATCATC
TGTCTCTGCAGATTCGATTTTGTTTTCGTTTTGAATCCAACAATATAAAATACTGAAGGG
ATTTGGCATAGGCTATGGAATAAGCCAGGGTAAAGTAATCCATTTTCTATGTGTTATACA
GAGCCAGGACGAAGGAATTATTTTTCTGGCATCAAGAGATGAATTAGAGGAGTGTCTTTT
CTTGCAGTCTCTTCTAGGCATTTATTTCAGCAATCAGATTGTATCTTAATTTCTCCCCAA
TGCAGTTAGGAATGGGGTTTTTAGGGGGGATACTACTTAAGCCTTCAGAGATAATGGTTT
TTAGTCTGGCACATCACAGCCCTGCCCTGTGAGCCTCCGTACCCGTACCTCTTCCTGGTG
TCCTGAGGATCAGGACCCGGCTAGCACCTGTGGAAACACTTGATGAAGACTGTTTATTAT
TAAAAGTGTAAAGAAGCCCAGGGGAAAAAAAGGTAGAACCCTGAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-762, gnl|bosTau2|chr11 (67194395-67193651)
               

               
               1-762, gnl|Hg17|chrX (117933968-117934680)
               

               
               1-762, gnl|Mm7|chrX (31122090-31122816)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-762, gnl|bosTau2|chr11 (67194395-67193651)
               

               
               1-762, gnl|Hg17|chrX (117933968-117934680)
               

               
               1-762, gnl|Mm7|chrX (31122090-31122816)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	1-762, gnl\|bosTau2\|chr11 (67194395-67193651)
	1-762, gnl\|Hg17\|chrX (117933968-117934680)
	1-762, gnl\|Mm7\|chrX (31122090-31122816)