Ss1.1-Lng1-LNG010033F05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTTCATCATGGCTCTGAAGGCAGTGGGAGCCCCTCTGAAAAGCCGGGACGTGGAGGATA TCGTGATCTATCTCAGCTCCTTGGGGAAGCACAACAGCATCACCACAGACAGCCTGACCA GCACCTACAAGCAGTGGTCCTTGGCTCAGCAGAAAAGCACCCTGGCAACAGCAGCAGAGT ATTATAGACCTGCCAAGCAGAGTGCTTCCCCACAGAGTCCATCAAAGAAGCAGAGAGAGA ATTCAACCCCACAGCCTCCCAAGATGGATCTGCTGACTGTGCCAGTGGTCGATATGGGGA CAGAGGCTCGGCCCATGACCCTGGAGGAGATGGAAGACGTTGGCAAGCGGTACCGTGAGA GGAAGCGGCAGAGCAAGCTCGAGGTCCCCTCCATCCAGTACACAGAGCGCTGCCGTCTGG TGCGCAGCGGGAATGAGCACTTTGATGAGCACTGCCTCCCGTCCACCATCCACGGGGAGA TGGGAGAGATCATCAACAGGTCCCGCACAGACACCTTTCTGGTCTACCTGCAGTGCTGGA AGCTCTGCGAGGCCTACGGCCTCCCGCTGACCGAGGATATCCTCATGAGAGCCCTGTTGT ACCCTGGAGACAAGATCATTTTTCAGAAGGACCAGGTGCGCCCGATTCGGCAGCCTGGAG GCTACTACTCAGACCTGAGGACCTTCAGCCCGAACCTGGCCCTGCTCAGGTTCCAGGGCA CCTCCCAGCCTACAGATAAGAAGCCTGACAATAGGAAAATGCCAACAAAAAACAAGAAAA TACACTTCAAGGAGTTTGAGGAATTCACCAGAAAGCTGAAGGAAAAGAGGCCTAGTGGTC CTCAGCGAACTCATCCCAATTTCTTCTGGCCGGGTCACCTCCTGGACAAGCTGCAGCTCT ACCTACCCACCATGGCCGTGGACCGCAGCCTGGCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTTCATCATGGCTCTGAAGGCAGTGGGAGCCCCTCTGAAAAGCCGGGACGTGGAGGATA TCGTGATCTATCTCAGCTCCTTGGGGAAGCACAACAGCATCACCACAGACAGCCTGACCA GCACCTACAAGCAGTGGTCCTTGGCTCAGCAGAAAAGCACCCTGGCAACAGCAGCAGAGT ATTATAGACCTGCCAAGCAGAGTGCTTCCCCACAGAGTCCATCAAAGAAGCAGAGAGAGA ATTCAACCCCACAGCCTCCCAAGATGGATCTGCTGACTGTGCCAGTGGTCGATATGGGGA CAGAGGCTCGGCCCATGACCCTGGAGGAGATGGAAGACGTTGGCAAGCGGTACCGTGAGA GGAAGCGGCAGAGCAAGCTCGAGGTCCCCTCCATCCAGTACACAGAGCGCTGCCGTCTGG TGCGCAGCGGGAATGAGCACTTTGATGAGCACTGCCTCCCGTCCACCATCCACGGGGAGA TGGGAGAGATCATCAACAGGTCCCGCACAGACACCTTTCTGGTCTACCTGCAGTGCTGGA AGCTCTGCGAGGCCTACGGCCTCCCGCTGACCGAGGATATCCTCATGAGAGCCCTGTTGT ACCCTGGAGACAAGATCATTTTTCAGAAGGACCAGGTGCGCCCGATTCGGCAGCCTGGAG GCTACTACTCAGACCTGAGGACCTTCAGCCCGAACCTGGCCCTGCTCAGGTTCCAGGGCA CCTCCCAGCCTACAGATAAGAAGCCTGACAATAGGAAAATGCCAACAAAAAACAAGAAAA TACACTTCAAGGAGTTTGAGGAATTCACCAGAAAGCTGAAGGAAAAGAGGCCTAGTGGTC CTCAGCGAACTCATCCCAATTTCTTCTGGCCGGGTCACCTCCTGGACAAGCTGCAGCTCT ACCTACCCACCATGGCCGTGGACCGCAGCCTGGCAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 27-179, gnl|bosTau2|chr8 (40764860-40764708) | |
| 27-179, gnl|canFam2|chr20 (8742753-8742123) | |
| 27-179, gnl|echTel1|scaffold_190243 (3351-2770) | |
| 27-179, gnl|hg17|chr3 (130616735-130617345) | |
| 27-179, gnl|Hg17|chr3 (130616939-130616787) | |
| 27-179, gnl|loxAfr1|scaffold_50623 (8212-8781) | |
| 27-179, gnl|mm7|chr6 (115845681-115846161) | |
| 27-179, gnl|Mm7|chr6 (115845871-115845719) | |
| 27-179, gnl|oryCun1|scaffold_211813 (15804-16347) | |
| 27-179, gnl|panTro1|chr2 (132670216-132670826) | |
| 27-179, gnl|rheMac2|chr11 (85419328-85418733) | |
| 27-179, gnl|rn3|chr4 (152201180-152201657) | |
| 376-591, gnl|bosTau2|chr8 (40763277-40763062) | |
| 376-591, gnl|canFam2|chr20 (8744934-8744646) | |
| 376-591, gnl|echTel1|scaffold_190243 (5948-5667) | |
| 376-591, gnl|hg17|chr3 (130610156-130610437) | |
| 376-591, gnl|Hg17|chr3 (130610401-130610186) | |
| 376-591, gnl|loxAfr1|scaffold_50623 (4154-4437) | |
| 376-591, gnl|mm7|chr6 (115841589-115841860) | |
| 376-591, gnl|Mm7|chr6 (115841826-115841611) | |
| 376-591, gnl|oryCun1|scaffold_211813 (11181-11460) | |
| 376-591, gnl|panTro1|chr2 (132663587-132663868) | |
| 376-591, gnl|rheMac2|chr11 (85426249-85425968) | |
| 376-591, gnl|rn3|chr4 (152196580-152196851) | |
| 804-934, gnl|bosTau2|chr8 (40756213-40756083) | |
| 804-934, gnl|Hg17|chr3 (130603400-130603270) | |
| 804-934, gnl|Mm7|chr6 (115836914-115836787) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 27-179, gnl|bosTau2|chr8 (40764860-40764708) | |
| 27-179, gnl|canFam2|chr20 (8742753-8742123) | |
| 27-179, gnl|echTel1|scaffold_190243 (3351-2770) | |
| 27-179, gnl|hg17|chr3 (130616735-130617345) | |
| 27-179, gnl|Hg17|chr3 (130616939-130616787) | |
| 27-179, gnl|loxAfr1|scaffold_50623 (8212-8781) | |
| 27-179, gnl|mm7|chr6 (115845681-115846161) | |
| 27-179, gnl|Mm7|chr6 (115845871-115845719) | |
| 27-179, gnl|oryCun1|scaffold_211813 (15804-16347) | |
| 27-179, gnl|panTro1|chr2 (132670216-132670826) | |
| 27-179, gnl|rheMac2|chr11 (85419328-85418733) | |
| 27-179, gnl|rn3|chr4 (152201180-152201657) | |
| 376-591, gnl|bosTau2|chr8 (40763277-40763062) | |
| 376-591, gnl|canFam2|chr20 (8744934-8744646) | |
| 376-591, gnl|echTel1|scaffold_190243 (5948-5667) | |
| 376-591, gnl|hg17|chr3 (130610156-130610437) | |
| 376-591, gnl|Hg17|chr3 (130610401-130610186) | |
| 376-591, gnl|loxAfr1|scaffold_50623 (4154-4437) | |
| 376-591, gnl|mm7|chr6 (115841589-115841860) | |
| 376-591, gnl|Mm7|chr6 (115841826-115841611) | |
| 376-591, gnl|oryCun1|scaffold_211813 (11181-11460) | |
| 376-591, gnl|panTro1|chr2 (132663587-132663868) | |
| 376-591, gnl|rheMac2|chr11 (85426249-85425968) | |
| 376-591, gnl|rn3|chr4 (152196580-152196851) | |
| 804-934, gnl|bosTau2|chr8 (40756213-40756083) | |
| 804-934, gnl|Hg17|chr3 (130603400-130603270) | |
| 804-934, gnl|Mm7|chr6 (115836914-115836787) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) |