Non-Coding RNA Search

Ss1.1-Lng1-LNG010036B03.5

Sequence:


               
               ACACAGGTGCGGAGCAGGGCAGTGTGTCCCAGCTCTAGGCATCAGAGCTCTAGCGCTGGG
AGTTGAGGCTTCCGAGCTGCTCACAACCCTGGACCCCGAGGCCCCCGGGCCGGAGAGCGG
AGCCCTGGGGTCGTCCAAAGCACTGGGCCCTGAGCCCCCCGGGTCAAACCGCGAAATTCC
GGGGCCTACTGCTGAGCGGGACACCGAGGTCCCCAGGCCAGGCGGCGAGGTCCCCGTGTC
TTCCCAAAACCAGTGCGCAGAGACCCCCAAGCAAGAGCGCGAAGTCTTCCAGCCATCACC
GGGGCAGGACGCAGCTGAGGGTTTTGTGAGTCCTGGGCCAGGCAGCGACGACCCTGAGCC
GTCTGAAGTGCGAGGAGTGGGGCTCCTGGATCAGTGTCCCTCTCAGGGTTGCGAGACATA
CTCAGAGTCGGAAGCCCCCCAGCTGCGTTTTCTGCTGCACTCGGAGACCCCACAACAGCC
CCGGGAGGAGCCGCTAATGGAGACGCCCATCGAGCGCGAAATCCGCCGCAGCTGCGAACG
CGAGGAGAGCCTGCGCCGGAGCCGGGGCCTGAGCCCAGGTCGCGCCGGCCGTGAACTCGT
CGAACTGCGCGTGCGGCCGGTGCTCAGCCTGCCGGGCCCCGGCCCCGCGCTCCCGCGTGC
CTTGGAGCGCGCTCGGGCGGGCGCGCAGATGCAGCGAGACATCGAGCGGGAGGCCCATCG
GCAGGCGGCGCTGGCACGCTCTGCGGTCCCGGAGCAGCGCACCCGGCCGCCGCCGCAGCC
TCTGGGCGAGCTCAAGCGCTTCTTCGAGACTGCCGGCTGGTGCGGCTCCACGCCGGCGGC
GGAGGGCAGCGCGGGCCAGCATCGGCTGTCTGAGCCCGGAGGCCGGCCGCGCTCATCCGT
GCACGGCCGGTGCCAGGTGCTGGGGCGGGCGAATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACAGGTGCGGAGCAGGGCAGTGTGTCCCAGCTCTAGGCATCAGAGCTCTAGCGCTGGG
AGTTGAGGCTTCCGAGCTGCTCACAACCCTGGACCCCGAGGCCCCCGGGCCGGAGAGCGG
AGCCCTGGGGTCGTCCAAAGCACTGGGCCCTGAGCCCCCCGGGTCAAACCGCGAAATTCC
GGGGCCTACTGCTGAGCGGGACACCGAGGTCCCCAGGCCAGGCGGCGAGGTCCCCGTGTC
TTCCCAAAACCAGTGCGCAGAGACCCCCAAGCAAGAGCGCGAAGTCTTCCAGCCATCACC
GGGGCAGGACGCAGCTGAGGGTTTTGTGAGTCCTGGGCCAGGCAGCGACGACCCTGAGCC
GTCTGAAGTGCGAGGAGTGGGGCTCCTGGATCAGTGTCCCTCTCAGGGTTGCGAGACATA
CTCAGAGTCGGAAGCCCCCCAGCTGCGTTTTCTGCTGCACTCGGAGACCCCACAACAGCC
CCGGGAGGAGCCGCTAATGGAGACGCCCATCGAGCGCGAAATCCGCCGCAGCTGCGAACG
CGAGGAGAGCCTGCGCCGGAGCCGGGGCCTGAGCCCAGGTCGCGCCGGCCGTGAACTCGT
CGAACTGCGCGTGCGGCCGGTGCTCAGCCTGCCGGGCCCCGGCCCCGCGCTCCCGCGTGC
CTTGGAGCGCGCTCGGGCGGGCGCGCAGATGCAGCGAGACATCGAGCGGGAGGCCCATCG
GCAGGCGGCGCTGGCACGCTCTGCGGTCCCGGAGCAGCGCACCCGGCCGCCGCCGCAGCC
TCTGGGCGAGCTCAAGCGCTTCTTCGAGACTGCCGGCTGGTGCGGCTCCACGCCGGCGGC
GGAGGGCAGCGCGGGCCAGCATCGGCTGTCTGAGCCCGGAGGCCGGCCGCGCTCATCCGT
GCACGGCCGGTGCCAGGTGCTGGGGCGGGCGAATCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61826217|ref|XP_589610.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61826217|ref|XP_589610.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-922, gnl|bosTau2|chr7 (7742101-7741187)
               

               
               2-922, gnl|Hg17|chr19 (14044622-14045547)
               

               
               2-922, gnl|Mm7|chr8 (82589886-82589051)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-922, gnl|bosTau2|chr7 (7742101-7741187)
               

               
               2-922, gnl|Hg17|chr19 (14044622-14045547)
               

               
               2-922, gnl|Mm7|chr8 (82589886-82589051)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	2-922, gnl\|bosTau2\|chr7 (7742101-7741187)
	2-922, gnl\|Hg17\|chr19 (14044622-14045547)
	2-922, gnl\|Mm7\|chr8 (82589886-82589051)