Ss1.1-Lng1-LNG010042C12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGGGGGCTGCAGCACGAGACGCAGGAGCTGGCCTCCAAGCGGGTGGACATCCAGAACA AGCGCTTCTACCTGGACGTGAAGCAGAACGCCAAGGGCCGCTTCCTGAAGATCGCCGAGG TGGGCGCGGGCGGCAACAAGAGCCGCCTCACTCTCTCCATGTCAGTGGCCGTGGAGTTCC GCGACTACCTGGGCGACTTCATCGAGCACTACGCGCAGCTGGGCCCCAGCCAGCCGCCCG ACCTGGCCCAGGCGCAGGACGAGCCGCGCCGGGCGCTCAAGAGCGAGTTCCTGGTGCGCG AGAACCGCAAGTACTACATGGATCTCAAGGAGAACCAGCGCGGCCGCTTCCTGCGCATCC GCCAGACGGTCAACCGGGGGCCCGGCCTGGGCTCCACGCAGGGCCAGACCATTGCACTGC CCGCACAGGGGCTCATCGAGTTCCGCGACGCTCTGGCCAAGCTCATCGACGACTACGGAG TGGAGGAGGAGCCGGCCGAGCTGCCCGAGGGCACCTCCTTGACTGTGGACAACAAGCGCT TCTTCTTCGATGTGGGCTCCAACAAGTACGGTGTGTTTATGCGCGTGAGCGAGGTGAAGC CCACCTACCGCAACTCCATCACCGTGCCCTACAAGGTGTGGGCCAAGTTTGGACACACCT TCTGCAAGTACTCGGAAGAGATGAAGAAGATCCAAGAGAAGCAGAGGGAGAAGCGAGCCG CCTGTGAGCAGCTCCACCAGCAGCAGCAGCAGCAGCAGGAGGAGACCGCCGCTGCCACCC TGCTGCTGCAGGGTGAGGAAGAAGGGGAAGAAGATTGATCAAACTGGCAAAAAAACCCCA CACACATGCATACACACACACACACACACACACACACACACACACACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGGGGGCTGCAGCACGAGACGCAGGAGCTGGCCTCCAAGCGGGTGGACATCCAGAACA AGCGCTTCTACCTGGACGTGAAGCAGAACGCCAAGGGCCGCTTCCTGAAGATCGCCGAGG TGGGCGCGGGCGGCAACAAGAGCCGCCTCACTCTCTCCATGTCAGTGGCCGTGGAGTTCC GCGACTACCTGGGCGACTTCATCGAGCACTACGCGCAGCTGGGCCCCAGCCAGCCGCCCG ACCTGGCCCAGGCGCAGGACGAGCCGCGCCGGGCGCTCAAGAGCGAGTTCCTGGTGCGCG AGAACCGCAAGTACTACATGGATCTCAAGGAGAACCAGCGCGGCCGCTTCCTGCGCATCC GCCAGACGGTCAACCGGGGGCCCGGCCTGGGCTCCACGCAGGGCCAGACCATTGCACTGC CCGCACAGGGGCTCATCGAGTTCCGCGACGCTCTGGCCAAGCTCATCGACGACTACGGAG TGGAGGAGGAGCCGGCCGAGCTGCCCGAGGGCACCTCCTTGACTGTGGACAACAAGCGCT TCTTCTTCGATGTGGGCTCCAACAAGTACGGTGTGTTTATGCGCGTGAGCGAGGTGAAGC CCACCTACCGCAACTCCATCACCGTGCCCTACAAGGTGTGGGCCAAGTTTGGACACACCT TCTGCAAGTACTCGGAAGAGATGAAGAAGATCCAAGAGAAGCAGAGGGAGAAGCGAGCCG CCTGTGAGCAGCTCCACCAGCAGCAGCAGCAGCAGCAGGAGGAGACCGCCGCTGCCACCC TGCTGCTGCAGGGTGAGGAAGAAGGGGAAGAAGATTGATCAAACTGGCAAAAAAACCCCA CACACATGCATACACACACACACACACACACACACACACACACACACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 4-225, gnl|bosTau2|chr13 (10238213-10238450) | |
| 4-225, gnl|canFam2|chr16 (36258884-36258643) | |
| 4-225, gnl|danRer3|chr5 (4343327-4343534) | |
| 4-225, gnl|dasNov1|scaffold_19245 (5900-6123) | |
| 4-225, gnl|echTel1|scaffold_325342 (45743-45988) | |
| 4-225, gnl|fr1|chrUn (171877845-171877613) | |
| 4-225, gnl|galGal2|chr4 (35140505-35140705) | |
| 4-225, gnl|hg17|chr8 (31009449-31009690) | |
| 4-225, gnl|Hg17|chr8 (31009687-31009450) | |
| 4-225, gnl|loxAfr1|scaffold_66104 (2552-2311) | |
| 4-225, gnl|mm7|chr8 (32154607-32154366) | |
| 4-225, gnl|Mm7|chr8 (32154367-32154604) | |
| 4-225, gnl|monDom2|scaffold_32 (11126496-11126255) | |
| 4-225, gnl|oryCun1|scaffold_206478 (43844-44071) | |
| 4-225, gnl|panTro1|chr7 (32099074-32099315) | |
| 4-225, gnl|rheMac2|chr8 (31293574-31293815) | |
| 4-225, gnl|rn3|chr16 (62534606-62534847) | |
| 4-225, gnl|tetNig1|chrUn_random (111251867-111251639) | |
| 4-225, gnl|xenTro1|scaffold_242 (1004568-1004795) | |
| 439-691, gnl|bosTau2|chr13 (10238772-10239030) | |
| 439-691, gnl|canFam2|chr16 (36259484-36259284) | |
| 439-691, gnl|danRer3|chr5 (4342770-4342967) | |
| 439-691, gnl|dasNov1|scaffold_19245 (5414-5614) | |
| 439-691, gnl|echTel1|scaffold_285226 (47152-46952) | |
| 439-691, gnl|fr1|chrUn (171878481-171878281) | |
| 439-691, gnl|galGal2|chr4 (35139902-35140102) | |
| 439-691, gnl|hg17|chr8 (31008849-31009049) | |
| 439-691, gnl|Hg17|chr8 (31009128-31008870) | |
| 439-691, gnl|loxAfr1|scaffold_9824 (43404-43604) | |
| 439-691, gnl|mm7|chr8 (32155207-32155007) | |
| 439-691, gnl|Mm7|chr8 (32154926-32155184) | |
| 439-691, gnl|monDom2|scaffold_32 (11127099-11126899) | |
| 439-691, gnl|oryCun1|scaffold_146577 (22379-22580) | |
| 439-691, gnl|panTro1|chr7 (32098474-32098674) | |
| 439-691, gnl|rheMac2|chr8 (31292974-31293174) | |
| 439-691, gnl|rn3|chr16 (62534006-62534206) | |
| 439-691, gnl|tetNig1|chrUn_random (111252494-111252294) | |
| 439-691, gnl|xenTro1|scaffold_242 (1003962-1004162) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-225, gnl|bosTau2|chr13 (10238213-10238450) | |
| 4-225, gnl|canFam2|chr16 (36258884-36258643) | |
| 4-225, gnl|danRer3|chr5 (4343327-4343534) | |
| 4-225, gnl|dasNov1|scaffold_19245 (5900-6123) | |
| 4-225, gnl|echTel1|scaffold_325342 (45743-45988) | |
| 4-225, gnl|fr1|chrUn (171877845-171877613) | |
| 4-225, gnl|galGal2|chr4 (35140505-35140705) | |
| 4-225, gnl|hg17|chr8 (31009449-31009690) | |
| 4-225, gnl|Hg17|chr8 (31009687-31009450) | |
| 4-225, gnl|loxAfr1|scaffold_66104 (2552-2311) | |
| 4-225, gnl|mm7|chr8 (32154607-32154366) | |
| 4-225, gnl|Mm7|chr8 (32154367-32154604) | |
| 4-225, gnl|monDom2|scaffold_32 (11126496-11126255) | |
| 4-225, gnl|oryCun1|scaffold_206478 (43844-44071) | |
| 4-225, gnl|panTro1|chr7 (32099074-32099315) | |
| 4-225, gnl|rheMac2|chr8 (31293574-31293815) | |
| 4-225, gnl|rn3|chr16 (62534606-62534847) | |
| 4-225, gnl|tetNig1|chrUn_random (111251867-111251639) | |
| 4-225, gnl|xenTro1|scaffold_242 (1004568-1004795) | |
| 439-691, gnl|bosTau2|chr13 (10238772-10239030) | |
| 439-691, gnl|canFam2|chr16 (36259484-36259284) | |
| 439-691, gnl|danRer3|chr5 (4342770-4342967) | |
| 439-691, gnl|dasNov1|scaffold_19245 (5414-5614) | |
| 439-691, gnl|echTel1|scaffold_285226 (47152-46952) | |
| 439-691, gnl|fr1|chrUn (171878481-171878281) | |
| 439-691, gnl|galGal2|chr4 (35139902-35140102) | |
| 439-691, gnl|hg17|chr8 (31008849-31009049) | |
| 439-691, gnl|Hg17|chr8 (31009128-31008870) | |
| 439-691, gnl|loxAfr1|scaffold_9824 (43404-43604) | |
| 439-691, gnl|mm7|chr8 (32155207-32155007) | |
| 439-691, gnl|Mm7|chr8 (32154926-32155184) | |
| 439-691, gnl|monDom2|scaffold_32 (11127099-11126899) | |
| 439-691, gnl|oryCun1|scaffold_146577 (22379-22580) | |
| 439-691, gnl|panTro1|chr7 (32098474-32098674) | |
| 439-691, gnl|rheMac2|chr8 (31292974-31293174) | |
| 439-691, gnl|rn3|chr16 (62534006-62534206) | |
| 439-691, gnl|tetNig1|chrUn_random (111252494-111252294) | |
| 439-691, gnl|xenTro1|scaffold_242 (1003962-1004162) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ecc (0.23007) | |
| duo (0.172801) | |
| hyp (0.142837) | |
| ese (0.126502) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.23007) | |
| duo (0.172801) | |
| hyp (0.142837) | |
| ese (0.126502) |