Ss1.1-Lng1-LNG010043G03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATGGCGGCTGAGGTGGCGAAGCAGCGGCGGCGGCGGCGGCGGCAGGAGTGAGCGCCC GGCTCGTCGCGCCGACGAGGGCCGGGCAGGGCCGCGCGCGGGCCGCGTCCTGCCCCTGAG GCCGGGGCGCGCCGGTCGCCGCGCCCCGCCAGCTCCCGGTGATTTCCTAGAAGCATGGTT TTTTGTTGCCCTTGACCTCCCAGCCTGGTGAGGCCTCTGTCCTGAGAATGTCAAGTTCAG GTTATCCTCCCAACCAGGGGGCGTTCAGCACAGAGCAGAGTCGCTACCCTTCGCACTCGG TTCAGTACACCTTTCCCAGCGCCCGTCACCAGCAGGAATTTGCAGTCCCTGACTACCGTT CTTCTCATCTTGAAGTCAGTCAGGCGTCACAGCTCTTGCAGCAGCAGCAGCAGCAGCAGC TTCGCAGACGGCCTTCCCTGCTTTCCGAGTTTCACCCGGGTTCCGACAGGCCCCAGGAAA GGAGAAGTGGATACGAGCAGTTCCACCCGGGCCCTTCCCCGGTGGACCATGACTCGCTGG AGTCCAAGCGGCCTCGCCTGGAGCAGGTTTCCGACTCCCACTTCCAGCGCATCAGTGCTG CCGTCCTCCCTTTGGTGCACACGCTGCCAGAAGGACTGAGGTCTTCTGCCGATGCTAAGA AGGATCCGGCATTTGGAGTCAAACATGAAGCTCCTTCCTCTCCCCTCTCTGGGCAGCCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATGGCGGCTGAGGTGGCGAAGCAGCGGCGGCGGCGGCGGCGGCAGGAGTGAGCGCCC GGCTCGTCGCGCCGACGAGGGCCGGGCAGGGCCGCGCGCGGGCCGCGTCCTGCCCCTGAG GCCGGGGCGCGCCGGTCGCCGCGCCCCGCCAGCTCCCGGTGATTTCCTAGAAGCATGGTT TTTTGTTGCCCTTGACCTCCCAGCCTGGTGAGGCCTCTGTCCTGAGAATGTCAAGTTCAG GTTATCCTCCCAACCAGGGGGCGTTCAGCACAGAGCAGAGTCGCTACCCTTCGCACTCGG TTCAGTACACCTTTCCCAGCGCCCGTCACCAGCAGGAATTTGCAGTCCCTGACTACCGTT CTTCTCATCTTGAAGTCAGTCAGGCGTCACAGCTCTTGCAGCAGCAGCAGCAGCAGCAGC TTCGCAGACGGCCTTCCCTGCTTTCCGAGTTTCACCCGGGTTCCGACAGGCCCCAGGAAA GGAGAAGTGGATACGAGCAGTTCCACCCGGGCCCTTCCCCGGTGGACCATGACTCGCTGG AGTCCAAGCGGCCTCGCCTGGAGCAGGTTTCCGACTCCCACTTCCAGCGCATCAGTGCTG CCGTCCTCCCTTTGGTGCACACGCTGCCAGAAGGACTGAGGTCTTCTGCCGATGCTAAGA AGGATCCGGCATTTGGAGTCAAACATGAAGCTCCTTCCTCTCCCCTCTCTGGGCAGCCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 158-336, gnl|bosTau2|chr19 (23855793-23855972) | |
| 158-336, gnl|canFam2|chr5 (42708628-42708509) | |
| 158-336, gnl|canFam2|chr5 (42708630-42708509) | |
| 158-336, gnl|danRer3|chr5 (49104074-49103955) | |
| 158-336, gnl|danRer3|chr5 (46337877-46337998) | |
| 158-336, gnl|echTel1|scaffold_292280 (2656-2544) | |
| 158-336, gnl|echTel1|scaffold_292280 (2656-2544) | |
| 158-336, gnl|fr1|chrUn (253493394-253493532) | |
| 158-336, gnl|fr1|chrUn (253493415-253493532) | |
| 158-336, gnl|galGal2|chr19 (6079813-6079932) | |
| 158-336, gnl|galGal2|chr19 (6079811-6079932) | |
| 158-336, gnl|hg17|chr17 (16038493-16038612) | |
| 158-336, gnl|Hg17|chr17 (16038679-16038500) | |
| 158-336, gnl|hg17|chr20 (26042505-26042626) | |
| 158-336, gnl|loxAfr1|scaffold_212882 (765-646) | |
| 158-336, gnl|loxAfr1|scaffold_212882 (767-646) | |
| 158-336, gnl|mm7|chr11 (62519888-62520007) | |
| 158-336, gnl|mm7|chr11 (62519886-62520007) | |
| 158-336, gnl|Mm7|chr11 (62520074-62519895) | |
| 158-336, gnl|monDom2|scaffold_86 (5643823-5643942) | |
| 158-336, gnl|monDom2|scaffold_86 (5643821-5643942) | |
| 158-336, gnl|panTro1|chr19_random (4914578-4914697) | |
| 158-336, gnl|panTro1|chrUn_random (27567297-27567176) | |
| 158-336, gnl|rheMac2|chr16 (16268502-16268383) | |
| 158-336, gnl|rheMac2|chr16 (16268504-16268383) | |
| 158-336, gnl|rn3|chr10 (48622603-48622722) | |
| 158-336, gnl|rn3|chr10 (48622601-48622722) | |
| 158-336, gnl|tetNig1|chr7 (2130023-2130138) | |
| 158-336, gnl|tetNig1|chr7 (2130023-2130138) | |
| 158-336, gnl|xenTro1|scaffold_454 (100158-100040) | |
| 158-336, gnl|xenTro1|scaffold_454 (100160-100040) | |
| 468-663, gnl|bosTau2|chr19 (23866674-23866869) | |
| 468-663, gnl|canFam2|chr5 (42729936-42729726) | |
| 468-663, gnl|danRer3|chr5 (49113188-49112973) | |
| 468-663, gnl|dasNov1|scaffold_94756 (9738-9528) | |
| 468-663, gnl|echTel1|scaffold_292280 (2947-2749) | |
| 468-663, gnl|fr1|chrUn (253490509-253490730) | |
| 468-663, gnl|galGal2|chr19 (6076194-6076407) | |
| 468-663, gnl|hg17|chr17 (16015840-16016050) | |
| 468-663, gnl|Hg17|chr17 (16016036-16015841) | |
| 468-663, gnl|loxAfr1|scaffold_17921 (26707-26497) | |
| 468-663, gnl|mm7|chr11 (62504431-62504646) | |
| 468-663, gnl|Mm7|chr11 (62504627-62504432) | |
| 468-663, gnl|monDom2|scaffold_86 (5632911-5633121) | |
| 468-663, gnl|oryCun1|scaffold_211350 (230386-230596) | |
| 468-663, gnl|panTro1|chr19_random (4891867-4892077) | |
| 468-663, gnl|rheMac2|chr16 (16293443-16293233) | |
| 468-663, gnl|rn3|chr10 (48611450-48611675) | |
| 468-663, gnl|xenTro1|scaffold_454 (111219-111012) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 158-336, gnl|bosTau2|chr19 (23855793-23855972) | |
| 158-336, gnl|canFam2|chr5 (42708628-42708509) | |
| 158-336, gnl|canFam2|chr5 (42708630-42708509) | |
| 158-336, gnl|danRer3|chr5 (49104074-49103955) | |
| 158-336, gnl|danRer3|chr5 (46337877-46337998) | |
| 158-336, gnl|echTel1|scaffold_292280 (2656-2544) | |
| 158-336, gnl|echTel1|scaffold_292280 (2656-2544) | |
| 158-336, gnl|fr1|chrUn (253493394-253493532) | |
| 158-336, gnl|fr1|chrUn (253493415-253493532) | |
| 158-336, gnl|galGal2|chr19 (6079813-6079932) | |
| 158-336, gnl|galGal2|chr19 (6079811-6079932) | |
| 158-336, gnl|hg17|chr17 (16038493-16038612) | |
| 158-336, gnl|Hg17|chr17 (16038679-16038500) | |
| 158-336, gnl|hg17|chr20 (26042505-26042626) | |
| 158-336, gnl|loxAfr1|scaffold_212882 (765-646) | |
| 158-336, gnl|loxAfr1|scaffold_212882 (767-646) | |
| 158-336, gnl|mm7|chr11 (62519888-62520007) | |
| 158-336, gnl|mm7|chr11 (62519886-62520007) | |
| 158-336, gnl|Mm7|chr11 (62520074-62519895) | |
| 158-336, gnl|monDom2|scaffold_86 (5643823-5643942) | |
| 158-336, gnl|monDom2|scaffold_86 (5643821-5643942) | |
| 158-336, gnl|panTro1|chr19_random (4914578-4914697) | |
| 158-336, gnl|panTro1|chrUn_random (27567297-27567176) | |
| 158-336, gnl|rheMac2|chr16 (16268502-16268383) | |
| 158-336, gnl|rheMac2|chr16 (16268504-16268383) | |
| 158-336, gnl|rn3|chr10 (48622603-48622722) | |
| 158-336, gnl|rn3|chr10 (48622601-48622722) | |
| 158-336, gnl|tetNig1|chr7 (2130023-2130138) | |
| 158-336, gnl|tetNig1|chr7 (2130023-2130138) | |
| 158-336, gnl|xenTro1|scaffold_454 (100158-100040) | |
| 158-336, gnl|xenTro1|scaffold_454 (100160-100040) | |
| 468-663, gnl|bosTau2|chr19 (23866674-23866869) | |
| 468-663, gnl|canFam2|chr5 (42729936-42729726) | |
| 468-663, gnl|danRer3|chr5 (49113188-49112973) | |
| 468-663, gnl|dasNov1|scaffold_94756 (9738-9528) | |
| 468-663, gnl|echTel1|scaffold_292280 (2947-2749) | |
| 468-663, gnl|fr1|chrUn (253490509-253490730) | |
| 468-663, gnl|galGal2|chr19 (6076194-6076407) | |
| 468-663, gnl|hg17|chr17 (16015840-16016050) | |
| 468-663, gnl|Hg17|chr17 (16016036-16015841) | |
| 468-663, gnl|loxAfr1|scaffold_17921 (26707-26497) | |
| 468-663, gnl|mm7|chr11 (62504431-62504646) | |
| 468-663, gnl|Mm7|chr11 (62504627-62504432) | |
| 468-663, gnl|monDom2|scaffold_86 (5632911-5633121) | |
| 468-663, gnl|oryCun1|scaffold_211350 (230386-230596) | |
| 468-663, gnl|panTro1|chr19_random (4891867-4892077) | |
| 468-663, gnl|rheMac2|chr16 (16293443-16293233) | |
| 468-663, gnl|rn3|chr10 (48611450-48611675) | |
| 468-663, gnl|xenTro1|scaffold_454 (111219-111012) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |