Ss1.1-Lng1-LNG010044A02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACACTGGGGCCCCCAAGATGTCTCTGCCACCGCTGCCGCTACTGCTGCTACTGCTGCTGA CCAGCGAGCCCGCCGGGGCCATGCTGATCCGGATCCCCCTTCGCAGAGTCCACGCGGGAC TCAGGACCCTGAACCCACTGAGGGCATGGGAGAAGTCAGCAGAGCCCCCCAGGCTGGGGG CCCCATCCCCGGGGGACAAGACCTTTGTGCCTCTCTCCAACTACCTGAACGTCCAGTATT ACGGGGAAATTGGGCTGGGAACGCCCCCACAGAACTTCTCCGTCATCTTTGACACCGGCT CCTCCAACCTCTGGGTCCCGTCTGGGAGATGCCACTTCCTCAGTCTGCCCTGCTGGCTGC ACCACCGCTACCATTCCAAAGCTTCCAGCTCCTTCCACTCCAATGAGACCAAGTTTGCCA TTCAATACGGAACCGGGCGCCTCAACGGCATCCTGAGCGAGGACAAACTGACCATCGGAG GACTCACAGGTGCATCGGTGATTTTCGGGGAGGCCCTGTGGGAGCCCAGCCTGGTCTTCG CCTTTGCCCACTTTGATGGGATACTGGGCCTCGGTTTCCCCGTTCTGGCCGTGGGAGGAG TTCGGCCCCCGCTGGACAGCCTGGTGGACCAGGGGTTACTGGATAAGCCTGTCTTCTCCT TCTACCTCAACAGGGACCCCGAGGCAGCTGATGGAGGAGAGCTGGTCCTGGGTGGCTCGG ACCCGGCACACTACATCCCGCCCCTCACCTTCGTGCCCGTCACAGTCCCTGCCTACTGGC AGGTCCACGTGGAGCGAGTACATGTGGGCACAGGGCTGACTCTTTGTGCCCAGGGCTGTG CTGCCATTCTGGACACAGGCACATCTCTCATCACAGGACCCACTGAGGAGATTCAAGCCC TGCAGGCAGCCATTGGGGGCATCCCCCTGCTGATGGGGGAGTACCTCATCCAGTGCTCGA AAATCCCAACGCTGCCCCCAGTCTCCTTCCACCTTGGGGGGGTCTGGTTTAACCTCACGG CCCAGGACTATGTCATCCAGATTACTCGGGGTGGCGCCAGTCTCTGCTTATCCGGCTTCC AGGCTCTGGACATGCCTCCGCCCACAGGGCCCCTCTGGATCCTCGGCGATGTCTTCTTGG GTAGCTACGTGGCCGTCTTCGACCGTGGCGACAGAAAAAGCGATGCCCGAGTTGGGCTGG CGCGCGCTCGAGCTCATGGAGTAGGCCAGAGAAGGGGTGGGTTTGCGCAGGCGCAGTTTT CCGGCTGAGGAAACCCCCCCCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACACTGGGGCCCCCAAGATGTCTCTGCCACCGCTGCCGCTACTGCTGCTACTGCTGCTGA CCAGCGAGCCCGCCGGGGCCATGCTGATCCGGATCCCCCTTCGCAGAGTCCACGCGGGAC TCAGGACCCTGAACCCACTGAGGGCATGGGAGAAGTCAGCAGAGCCCCCCAGGCTGGGGG CCCCATCCCCGGGGGACAAGACCTTTGTGCCTCTCTCCAACTACCTGAACGTCCAGTATT ACGGGGAAATTGGGCTGGGAACGCCCCCACAGAACTTCTCCGTCATCTTTGACACCGGCT CCTCCAACCTCTGGGTCCCGTCTGGGAGATGCCACTTCCTCAGTCTGCCCTGCTGGCTGC ACCACCGCTACCATTCCAAAGCTTCCAGCTCCTTCCACTCCAATGAGACCAAGTTTGCCA TTCAATACGGAACCGGGCGCCTCAACGGCATCCTGAGCGAGGACAAACTGACCATCGGAG GACTCACAGGTGCATCGGTGATTTTCGGGGAGGCCCTGTGGGAGCCCAGCCTGGTCTTCG CCTTTGCCCACTTTGATGGGATACTGGGCCTCGGTTTCCCCGTTCTGGCCGTGGGAGGAG TTCGGCCCCCGCTGGACAGCCTGGTGGACCAGGGGTTACTGGATAAGCCTGTCTTCTCCT TCTACCTCAACAGGGACCCCGAGGCAGCTGATGGAGGAGAGCTGGTCCTGGGTGGCTCGG ACCCGGCACACTACATCCCGCCCCTCACCTTCGTGCCCGTCACAGTCCCTGCCTACTGGC AGGTCCACGTGGAGCGAGTACATGTGGGCACAGGGCTGACTCTTTGTGCCCAGGGCTGTG CTGCCATTCTGGACACAGGCACATCTCTCATCACAGGACCCACTGAGGAGATTCAAGCCC TGCAGGCAGCCATTGGGGGCATCCCCCTGCTGATGGGGGAGTACCTCATCCAGTGCTCGA AAATCCCAACGCTGCCCCCAGTCTCCTTCCACCTTGGGGGGGTCTGGTTTAACCTCACGG CCCAGGACTATGTCATCCAGATTACTCGGGGTGGCGCCAGTCTCTGCTTATCCGGCTTCC AGGCTCTGGACATGCCTCCGCCCACAGGGCCCCTCTGGATCCTCGGCGATGTCTTCTTGG GTAGCTACGTGGCCGTCTTCGACCGTGGCGACAGAAAAAGCGATGCCCGAGTTGGGCTGG CGCGCGCTCGAGCTCATGGAGTAGGCCAGAGAAGGGGTGGGTTTGCGCAGGCGCAGTTTT CCGGCTGAGGAAACCCCCCCCCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 231-355, gnl|bosTau2|chr18 (49196317-49196193) | |
| 231-355, gnl|Hg17|chr19 (55557161-55557037) | |
| 231-355, gnl|Mm7|chr7 (40755943-40756067) | |
| 474-674, gnl|bosTau2|chr18 (49195544-49195344) | |
| 474-674, gnl|Hg17|chr19 (55556209-55556009) | |
| 474-674, gnl|Mm7|chr7 (40756864-40757064) | |
| 798-941, gnl|bosTau2|chr18 (49193942-49193799) | |
| 798-941, gnl|canFam2|chr1 (109241215-109241045) | |
| 798-941, gnl|danRer3|chr3 (22525517-22525681) | |
| 798-941, gnl|dasNov1|scaffold_156441 (3995-3829) | |
| 798-941, gnl|echTel1|scaffold_298158 (1354-1522) | |
| 798-941, gnl|fr1|chrUn (23925166-23925334) | |
| 798-941, gnl|galGal2|chr1 (34598327-34598501) | |
| 798-941, gnl|hg17|chr19 (55529892-55530060) | |
| 798-941, gnl|Hg17|chr19 (55530041-55529898) | |
| 798-941, gnl|mm7|chr7 (40759893-40759716) | |
| 798-941, gnl|Mm7|chr7 (40759742-40759885) | |
| 798-941, gnl|monDom2|scaffold_513 (467-639) | |
| 798-941, gnl|oryCun1|scaffold_168708 (8272-8102) | |
| 798-941, gnl|panTro1|chr20 (52836033-52836201) | |
| 798-941, gnl|rheMac2|chr19 (56536336-56536504) | |
| 798-941, gnl|rn3|chr1 (95139452-95139276) | |
| 798-941, gnl|tetNig1|chrUn_random (39028499-39028643) | |
| 798-941, gnl|xenTro1|scaffold_389 (304385-304228) | |
| 1039-1270, gnl|bosTau2|chr18 (49192952-49192721) | |
| 1039-1270, gnl|Hg17|chr19 (55529172-55528941) | |
| 1039-1270, gnl|Mm7|chr7 (40761079-40761310) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 231-355, gnl|bosTau2|chr18 (49196317-49196193) | |
| 231-355, gnl|Hg17|chr19 (55557161-55557037) | |
| 231-355, gnl|Mm7|chr7 (40755943-40756067) | |
| 474-674, gnl|bosTau2|chr18 (49195544-49195344) | |
| 474-674, gnl|Hg17|chr19 (55556209-55556009) | |
| 474-674, gnl|Mm7|chr7 (40756864-40757064) | |
| 798-941, gnl|bosTau2|chr18 (49193942-49193799) | |
| 798-941, gnl|canFam2|chr1 (109241215-109241045) | |
| 798-941, gnl|danRer3|chr3 (22525517-22525681) | |
| 798-941, gnl|dasNov1|scaffold_156441 (3995-3829) | |
| 798-941, gnl|echTel1|scaffold_298158 (1354-1522) | |
| 798-941, gnl|fr1|chrUn (23925166-23925334) | |
| 798-941, gnl|galGal2|chr1 (34598327-34598501) | |
| 798-941, gnl|hg17|chr19 (55529892-55530060) | |
| 798-941, gnl|Hg17|chr19 (55530041-55529898) | |
| 798-941, gnl|mm7|chr7 (40759893-40759716) | |
| 798-941, gnl|Mm7|chr7 (40759742-40759885) | |
| 798-941, gnl|monDom2|scaffold_513 (467-639) | |
| 798-941, gnl|oryCun1|scaffold_168708 (8272-8102) | |
| 798-941, gnl|panTro1|chr20 (52836033-52836201) | |
| 798-941, gnl|rheMac2|chr19 (56536336-56536504) | |
| 798-941, gnl|rn3|chr1 (95139452-95139276) | |
| 798-941, gnl|tetNig1|chrUn_random (39028499-39028643) | |
| 798-941, gnl|xenTro1|scaffold_389 (304385-304228) | |
| 1039-1270, gnl|bosTau2|chr18 (49192952-49192721) | |
| 1039-1270, gnl|Hg17|chr19 (55529172-55528941) | |
| 1039-1270, gnl|Mm7|chr7 (40761079-40761310) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| clu (2.27327) | |
| nlu (0.191681) | |
| cag (0.151194) | |
| lnt (0.142308) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (2.27327) | |
| nlu (0.191681) | |
| cag (0.151194) | |
| lnt (0.142308) |