Ss1.1-Lng1-LNG010047E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACATGGATGTACTTGTTCAGATCAGATCCAACTTCAGCAAGCCGGACTTGATGGCTTCT CTCCTGCCCCAGCTGATGGGGGCTGATAATGTGCTGAAGCGCATGACCATCATTGGCGTT ATCCTCAGTTTCAGGGCCATGGCCCAGGAGGGACTTCGGGAGGTTTTCTCCTCCCACTGC CCATTTCTTATGGGTCCCATTGAGAGCCTGAAGGAGTTTGTCACTCCAGACACAGATATC AAGGTAACTCTGAGTGTCTTTGAGCTGGCATCTGCTGCGGGGGTGGGCTGTGACATTGAC CCAGCCCTGGTGGCTGCCATTGCCAATCTGAAAACAGATGCATCATCCCCTGAGGAAGAA TATAAGGTGGCCTGCCTGCTTTTGATCTTTCTTGCTGTTTCCCTCCCCCTCCTTGCCACA GACCCTTCTTCCTTCTACAGCATTGAGAAAGATGGTTACAGCAACAATATTCACTGCTTG ACCAAAGCCATCATCCAGGTGTCAGCTGCCCTCTTCACACTCTATAACAAGAACATTGAA ACGCACCTCAAGGAATTTCTGGTGGTGGCCTCTGTCAGCCTCCTGCAACTGGGCCAGGAG ACTGACAAGCTTAAAACCAGAAATCGGGAATCCATTTCTCTGCTCATGCGCTTGGTGGTG GAGGAGTCCTCCTTCCTGACCCTGGACATGCTGGAGTCCTGCTTCCCTTATGTCCTGCTT CGAAATGCCTATCGCGAGGTGTCCCGGGCCTTCCACCTGAACCGAGTGCTGGCCAGTACC CACTGAAGGGCCCTTTGCACCTGCCTGAATTCATGCTGTCCTGGAAGCTGTGGTCATTGT CTCAAAGGGTGGGGTCGCCAGGGAGAGGATCAGCCAGAGCTGGTAATGAAGGATATGGAG GAACAGCCCAGGGCTGAGGAATCCTAGAGAAATGGGGCTGGTGGGGGGTGGTGGTGGGGG AAGATGGAGGACTTTTTTATGGAGAAAAGTTAGGGGATTGGGGCCACATGTATCAATTTT TACAATGAAAAAAACGTGGCATGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACATGGATGTACTTGTTCAGATCAGATCCAACTTCAGCAAGCCGGACTTGATGGCTTCT CTCCTGCCCCAGCTGATGGGGGCTGATAATGTGCTGAAGCGCATGACCATCATTGGCGTT ATCCTCAGTTTCAGGGCCATGGCCCAGGAGGGACTTCGGGAGGTTTTCTCCTCCCACTGC CCATTTCTTATGGGTCCCATTGAGAGCCTGAAGGAGTTTGTCACTCCAGACACAGATATC AAGGTAACTCTGAGTGTCTTTGAGCTGGCATCTGCTGCGGGGGTGGGCTGTGACATTGAC CCAGCCCTGGTGGCTGCCATTGCCAATCTGAAAACAGATGCATCATCCCCTGAGGAAGAA TATAAGGTGGCCTGCCTGCTTTTGATCTTTCTTGCTGTTTCCCTCCCCCTCCTTGCCACA GACCCTTCTTCCTTCTACAGCATTGAGAAAGATGGTTACAGCAACAATATTCACTGCTTG ACCAAAGCCATCATCCAGGTGTCAGCTGCCCTCTTCACACTCTATAACAAGAACATTGAA ACGCACCTCAAGGAATTTCTGGTGGTGGCCTCTGTCAGCCTCCTGCAACTGGGCCAGGAG ACTGACAAGCTTAAAACCAGAAATCGGGAATCCATTTCTCTGCTCATGCGCTTGGTGGTG GAGGAGTCCTCCTTCCTGACCCTGGACATGCTGGAGTCCTGCTTCCCTTATGTCCTGCTT CGAAATGCCTATCGCGAGGTGTCCCGGGCCTTCCACCTGAACCGAGTGCTGGCCAGTACC CACTGAAGGGCCCTTTGCACCTGCCTGAATTCATGCTGTCCTGGAAGCTGTGGTCATTGT CTCAAAGGGTGGGGTCGCCAGGGAGAGGATCAGCCAGAGCTGGTAATGAAGGATATGGAG GAACAGCCCAGGGCTGAGGAATCCTAGAGAAATGGGGCTGGTGGGGGGTGGTGGTGGGGG AAGATGGAGGACTTTTTTATGGAGAAAAGTTAGGGGATTGGGGCCACATGTATCAATTTT TACAATGAAAAAAACGTGGCATGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 454-567, gnl|bosTau2|chr5 (16276555-16276442) | |
| 454-567, gnl|canFam2|chr27 (3812199-3812063) | |
| 454-567, gnl|danRer3|chrNA (91059235-91059367) | |
| 454-567, gnl|dasNov1|scaffold_16780 (44565-44429) | |
| 454-567, gnl|echTel1|scaffold_318251 (5969-5844) | |
| 454-567, gnl|fr1|chrUn (184353750-184353869) | |
| 454-567, gnl|hg17|chr12 (53216975-53217111) | |
| 454-567, gnl|Hg17|chr12 (53216994-53217107) | |
| 454-567, gnl|loxAfr1|scaffold_5595 (47180-47317) | |
| 454-567, gnl|mm7|chr15 (103480270-103480400) | |
| 454-567, gnl|Mm7|chr15 (103480283-103480396) | |
| 454-567, gnl|monDom2|scaffold_53 (7631290-7631183) | |
| 454-567, gnl|oryCun1|scaffold_213447 (15748-15628) | |
| 454-567, gnl|panTro1|chr10 (54484145-54484281) | |
| 454-567, gnl|rheMac2|chr11 (51654240-51654376) | |
| 454-567, gnl|rn3|chr7 (142469982-142470112) | |
| 454-567, gnl|tetNig1|chr17 (9102206-9102090) | |
| 454-567, gnl|xenTro1|scaffold_604 (778490-778607) | |
| 654-1034, gnl|bosTau2|chr5 (16270249-16269870) | |
| 654-1034, gnl|Hg17|chr12 (53222625-53223003) | |
| 654-1034, gnl|Mm7|chr15 (103486229-103486605) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 454-567, gnl|bosTau2|chr5 (16276555-16276442) | |
| 454-567, gnl|canFam2|chr27 (3812199-3812063) | |
| 454-567, gnl|danRer3|chrNA (91059235-91059367) | |
| 454-567, gnl|dasNov1|scaffold_16780 (44565-44429) | |
| 454-567, gnl|echTel1|scaffold_318251 (5969-5844) | |
| 454-567, gnl|fr1|chrUn (184353750-184353869) | |
| 454-567, gnl|hg17|chr12 (53216975-53217111) | |
| 454-567, gnl|Hg17|chr12 (53216994-53217107) | |
| 454-567, gnl|loxAfr1|scaffold_5595 (47180-47317) | |
| 454-567, gnl|mm7|chr15 (103480270-103480400) | |
| 454-567, gnl|Mm7|chr15 (103480283-103480396) | |
| 454-567, gnl|monDom2|scaffold_53 (7631290-7631183) | |
| 454-567, gnl|oryCun1|scaffold_213447 (15748-15628) | |
| 454-567, gnl|panTro1|chr10 (54484145-54484281) | |
| 454-567, gnl|rheMac2|chr11 (51654240-51654376) | |
| 454-567, gnl|rn3|chr7 (142469982-142470112) | |
| 454-567, gnl|tetNig1|chr17 (9102206-9102090) | |
| 454-567, gnl|xenTro1|scaffold_604 (778490-778607) | |
| 654-1034, gnl|bosTau2|chr5 (16270249-16269870) | |
| 654-1034, gnl|Hg17|chr12 (53222625-53223003) | |
| 654-1034, gnl|Mm7|chr15 (103486229-103486605) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| che (0.545256) | |
| csp (0.483559) | |
| spl (0.286369) | |
| cly (0.241284) | |
| fty (0.17584) | |
| pty (0.142714) | |
| med (0.116252) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.545256) | |
| csp (0.483559) | |
| spl (0.286369) | |
| cly (0.241284) | |
| fty (0.17584) | |
| pty (0.142714) | |
| med (0.116252) |