Ss1.1-Lng1-LNG010061E05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATTTCGCTGCCTTCAGAGACTTGAAGAAAAAGCAGGCTTTGCGAGCAAAGTATGGAATT AGAGATGATATGGTCTTGCCATTTGAGCCTGTGCCAATCATTGAAATCCCAGGTTTTGGA AAGCTTTCTGCTGTAACTATGTGTGATGAGTTGAAAGTTCAGAGCCAAAATGACCGAGAA AAACTTGCAGAAGCAAAGGAGAAATTATACCTAAAGGGATTTTATGATGGTATAATGTTG GTGGATGGATTTGAAGGACAGAAGGTCCAAGATGTGAAGAAGAGTATTCGAAATAGGATG ATTGACACTGGAGATGCATATGCTTACATGGAACCAGAGAAACAAGTTATGTCCAGGTCT TCGGATGAATGTGTCGTGGCCCTGTGTGACCAGTGGTACTTGGATTATGGAGAAGAGAAG TGGAAGGAACAGACATGCCAGTGCTTGAAGAACCTCGAAACGTTCTGCGAGGAGACCAGG AGGAATTTTGAAGCGACCTTGGACTGGCTACAAGAGCATGCTTGCTCAAGAACTTATGGT CTCGGTACTCGTCTCCCGTGGGATGAGCAGTGGCTGATTGAATCACTTTCTGACTCCACT ATTTACATGGCATTTTACACAGCTGCACACCTGTTGCAGGGAGGTGACATACGTGGACAG GCAGAGTCTCCGCTGGGCATCAGACCACAGCAGATGACTAAGGAAGTTTGGGATTATATT TTCTTCAAGGAGGCTCCATTTCCTAAGACTCAGATCCCAAAGGAAACATTAGATCAGTTA AAGCAGGAATTTGAGTTCTGGTATCCTGTGGATCTTCGCGTCTCTGGCAAGGATCTTATT CCAAATCATCTTTCATATTTCCTTTATAATCATGTGGCAATGTGGCCAGAAGAAAGTGAC AAGTGGCCTGCAGCTGTGAGGGCAAATGGACATCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATTTCGCTGCCTTCAGAGACTTGAAGAAAAAGCAGGCTTTGCGAGCAAAGTATGGAATT AGAGATGATATGGTCTTGCCATTTGAGCCTGTGCCAATCATTGAAATCCCAGGTTTTGGA AAGCTTTCTGCTGTAACTATGTGTGATGAGTTGAAAGTTCAGAGCCAAAATGACCGAGAA AAACTTGCAGAAGCAAAGGAGAAATTATACCTAAAGGGATTTTATGATGGTATAATGTTG GTGGATGGATTTGAAGGACAGAAGGTCCAAGATGTGAAGAAGAGTATTCGAAATAGGATG ATTGACACTGGAGATGCATATGCTTACATGGAACCAGAGAAACAAGTTATGTCCAGGTCT TCGGATGAATGTGTCGTGGCCCTGTGTGACCAGTGGTACTTGGATTATGGAGAAGAGAAG TGGAAGGAACAGACATGCCAGTGCTTGAAGAACCTCGAAACGTTCTGCGAGGAGACCAGG AGGAATTTTGAAGCGACCTTGGACTGGCTACAAGAGCATGCTTGCTCAAGAACTTATGGT CTCGGTACTCGTCTCCCGTGGGATGAGCAGTGGCTGATTGAATCACTTTCTGACTCCACT ATTTACATGGCATTTTACACAGCTGCACACCTGTTGCAGGGAGGTGACATACGTGGACAG GCAGAGTCTCCGCTGGGCATCAGACCACAGCAGATGACTAAGGAAGTTTGGGATTATATT TTCTTCAAGGAGGCTCCATTTCCTAAGACTCAGATCCCAAAGGAAACATTAGATCAGTTA AAGCAGGAATTTGAGTTCTGGTATCCTGTGGATCTTCGCGTCTCTGGCAAGGATCTTATT CCAAATCATCTTTCATATTTCCTTTATAATCATGTGGCAATGTGGCCAGAAGAAAGTGAC AAGTGGCCTGCAGCTGTGAGGGCAAATGGACATCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 82-235, gnl|bosTau2|chr7 (38253368-38253215) | |
| 82-235, gnl|canFam2|chr2 (43439106-43439289) | |
| 82-235, gnl|danRer3|chr21 (29041455-29041290) | |
| 82-235, gnl|dasNov1|scaffold_30119 (41208-41393) | |
| 82-235, gnl|fr1|chrUn (264054673-264054862) | |
| 82-235, gnl|galGal2|chr13 (16830482-16830667) | |
| 82-235, gnl|hg17|chr5 (145511603-145511791) | |
| 82-235, gnl|Hg17|chr5 (145511767-145511614) | |
| 82-235, gnl|loxAfr1|scaffold_25771 (12826-13012) | |
| 82-235, gnl|mm7|chr18 (42612479-42612662) | |
| 82-235, gnl|Mm7|chr18 (42612643-42612490) | |
| 82-235, gnl|monDom2|scaffold_6 (60203215-60203036) | |
| 82-235, gnl|oryCun1|scaffold_210563 (48644-48459) | |
| 82-235, gnl|panTro1|chr4 (152238065-152238253) | |
| 82-235, gnl|rheMac2|chr6 (142607958-142608146) | |
| 82-235, gnl|rn3|chr18 (35469293-35469475) | |
| 82-235, gnl|tetNig1|chr7 (9265644-9265793) | |
| 82-235, gnl|xenTro1|scaffold_306 (1109243-1109413) | |
| 681-894, gnl|bosTau2|chr7 (38244281-38244068) | |
| 681-894, gnl|canFam2|chr2 (43432782-43433018) | |
| 681-894, gnl|danRer3|chr21 (29049127-29048907) | |
| 681-894, gnl|dasNov1|scaffold_64814 (3303-3067) | |
| 681-894, gnl|echTel1|scaffold_314782 (48057-48293) | |
| 681-894, gnl|fr1|chrUn (264051995-264052230) | |
| 681-894, gnl|galGal2|chr13 (16826491-16826721) | |
| 681-894, gnl|hg17|chr5 (145502610-145502846) | |
| 681-894, gnl|Hg17|chr5 (145502843-145502630) | |
| 681-894, gnl|loxAfr1|scaffold_5594 (73199-73431) | |
| 681-894, gnl|mm7|chr18 (42605902-42606137) | |
| 681-894, gnl|Mm7|chr18 (42606134-42605921) | |
| 681-894, gnl|monDom2|scaffold_6 (60209562-60209324) | |
| 681-894, gnl|oryCun1|scaffold_210563 (58446-58210) | |
| 681-894, gnl|panTro1|chr4 (152228641-152228877) | |
| 681-894, gnl|rn3|chr18 (35462324-35462560) | |
| 681-894, gnl|tetNig1|chr7 (9263561-9263788) | |
| 681-894, gnl|xenTro1|scaffold_306 (1102331-1102564) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 82-235, gnl|bosTau2|chr7 (38253368-38253215) | |
| 82-235, gnl|canFam2|chr2 (43439106-43439289) | |
| 82-235, gnl|danRer3|chr21 (29041455-29041290) | |
| 82-235, gnl|dasNov1|scaffold_30119 (41208-41393) | |
| 82-235, gnl|fr1|chrUn (264054673-264054862) | |
| 82-235, gnl|galGal2|chr13 (16830482-16830667) | |
| 82-235, gnl|hg17|chr5 (145511603-145511791) | |
| 82-235, gnl|Hg17|chr5 (145511767-145511614) | |
| 82-235, gnl|loxAfr1|scaffold_25771 (12826-13012) | |
| 82-235, gnl|mm7|chr18 (42612479-42612662) | |
| 82-235, gnl|Mm7|chr18 (42612643-42612490) | |
| 82-235, gnl|monDom2|scaffold_6 (60203215-60203036) | |
| 82-235, gnl|oryCun1|scaffold_210563 (48644-48459) | |
| 82-235, gnl|panTro1|chr4 (152238065-152238253) | |
| 82-235, gnl|rheMac2|chr6 (142607958-142608146) | |
| 82-235, gnl|rn3|chr18 (35469293-35469475) | |
| 82-235, gnl|tetNig1|chr7 (9265644-9265793) | |
| 82-235, gnl|xenTro1|scaffold_306 (1109243-1109413) | |
| 681-894, gnl|bosTau2|chr7 (38244281-38244068) | |
| 681-894, gnl|canFam2|chr2 (43432782-43433018) | |
| 681-894, gnl|danRer3|chr21 (29049127-29048907) | |
| 681-894, gnl|dasNov1|scaffold_64814 (3303-3067) | |
| 681-894, gnl|echTel1|scaffold_314782 (48057-48293) | |
| 681-894, gnl|fr1|chrUn (264051995-264052230) | |
| 681-894, gnl|galGal2|chr13 (16826491-16826721) | |
| 681-894, gnl|hg17|chr5 (145502610-145502846) | |
| 681-894, gnl|Hg17|chr5 (145502843-145502630) | |
| 681-894, gnl|loxAfr1|scaffold_5594 (73199-73431) | |
| 681-894, gnl|mm7|chr18 (42605902-42606137) | |
| 681-894, gnl|Mm7|chr18 (42606134-42605921) | |
| 681-894, gnl|monDom2|scaffold_6 (60209562-60209324) | |
| 681-894, gnl|oryCun1|scaffold_210563 (58446-58210) | |
| 681-894, gnl|panTro1|chr4 (152228641-152228877) | |
| 681-894, gnl|rn3|chr18 (35462324-35462560) | |
| 681-894, gnl|tetNig1|chr7 (9263561-9263788) | |
| 681-894, gnl|xenTro1|scaffold_306 (1102331-1102564) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| ssp (0.13552) |