Ss1.1-Lng1-LNG010062E12.5
|
CACGGGAGGGGCAACTCTGGAAATAAAGTGGAAGGAGGGCTGGGCTGAGCCGGGAAGTGT
TGAAAATCTGGGAGGCTGAGAGTGGGAGCCCAACGCTGTCCAGCTGACGAGGATGGAATA
CGCCATGAAGTCTCTCAGCCTTCTCTACCCCAGGTCCCTCTCCAGGTATGCAGCAGTAAG
CACCTCGGTGGTGACACAGCAGCTGCTGTCGGAGCCCAGCCTGGAGGCCCCCAGGACCCG
GCCCTGCAAAGTAAGCACCGCTGACCGGAGTGTGCGGAAGGGCATCATGGCATGCGGGCT
TGAGGACCTCCTCCTCAAGGTCCGGGACAGTCTGATGCTGGCAGACAAGCCTTTCTTTCT
GGTGCTGGAGGAAGATGGCACAACTGTAGAGACAGAAGAGTATTTCCAATCCCTGGCAGA
TGACACCGTGTTCATGGTTCTTCATAAGGGGCAGAAATGGCAGCCCCCATCACAGCAGGG
CACTAGGTACCAACTCTCCCTCTCCCATAAGCCTGCCAAGAAGATCGATGTGGCCCGTGT
AACCTTCAACCTGTACAAGGTGAACCCACAGGACTTCATTGGTTGCCTGAACATGAAGGC
GACTCTCTACGGTGCCTACTCCCTTTCCTACGATCTGCGCTGCTTTGGGGCCAAACGTGT
CATGAAAGAAGTTCTTCGCTGGGCCATCTTTGGCATGCAAGCCTCAGGCCACGTGCTGCT
TGGCACCTCCTGTTACCTGCAGCGGCTCCTGGATACCACTGAGGGGGAACAACCCACCAA
GGGCAAAGACCCATCCCTCATCCCGACCTGTCTGAAGATACTGCAGTGAAAGAATAGCCA
AGGACTAGAGTTGGCATCCCATGCTCAGCTGGTAGCACCCACAAGACTGGCAGCTAGAGA
GCTTCTCACCATCCCACACCCCCTGACCCCCACAGGACCATGAATGAGGAAGCAAGGGGA
AGGGCTGGAAATCTGGGCTGGGTTGGCCAAAGGAAAACTGAGGGTTCTTGGCCTGGTCTG
TCTCCTTCCTGCCTAGGTAGCATAGCAGACCAAGATTGTTCACCAGCAAGCCAGCCCTCA
GCATGAAGGCTGCCCCTCAGTATGAAGGCTGCCCCTCAGCACAAAGGCTGCCCCTCAGTA
TGAAGGCTGCCCCTCAGCAGCCCAGCTGCCCCTCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CACGGGAGGGGCAACTCTGGAAATAAAGTGGAAGGAGGGCTGGGCTGAGCCGGGAAGTGT
TGAAAATCTGGGAGGCTGAGAGTGGGAGCCCAACGCTGTCCAGCTGACGAGGATGGAATA
CGCCATGAAGTCTCTCAGCCTTCTCTACCCCAGGTCCCTCTCCAGGTATGCAGCAGTAAG
CACCTCGGTGGTGACACAGCAGCTGCTGTCGGAGCCCAGCCTGGAGGCCCCCAGGACCCG
GCCCTGCAAAGTAAGCACCGCTGACCGGAGTGTGCGGAAGGGCATCATGGCATGCGGGCT
TGAGGACCTCCTCCTCAAGGTCCGGGACAGTCTGATGCTGGCAGACAAGCCTTTCTTTCT
GGTGCTGGAGGAAGATGGCACAACTGTAGAGACAGAAGAGTATTTCCAATCCCTGGCAGA
TGACACCGTGTTCATGGTTCTTCATAAGGGGCAGAAATGGCAGCCCCCATCACAGCAGGG
CACTAGGTACCAACTCTCCCTCTCCCATAAGCCTGCCAAGAAGATCGATGTGGCCCGTGT
AACCTTCAACCTGTACAAGGTGAACCCACAGGACTTCATTGGTTGCCTGAACATGAAGGC
GACTCTCTACGGTGCCTACTCCCTTTCCTACGATCTGCGCTGCTTTGGGGCCAAACGTGT
CATGAAAGAAGTTCTTCGCTGGGCCATCTTTGGCATGCAAGCCTCAGGCCACGTGCTGCT
TGGCACCTCCTGTTACCTGCAGCGGCTCCTGGATACCACTGAGGGGGAACAACCCACCAA
GGGCAAAGACCCATCCCTCATCCCGACCTGTCTGAAGATACTGCAGTGAAAGAATAGCCA
AGGACTAGAGTTGGCATCCCATGCTCAGCTGGTAGCACCCACAAGACTGGCAGCTAGAGA
GCTTCTCACCATCCCACACCCCCTGACCCCCACAGGACCATGAATGAGGAAGCAAGGGGA
AGGGCTGGAAATCTGGGCTGGGTTGGCCAAAGGAAAACTGAGGGTTCTTGGCCTGGTCTG
TCTCCTTCCTGCCTAGGTAGCATAGCAGACCAAGATTGTTCACCAGCAAGCCAGCCCTCA
GCATGAAGGCTGCCCCTCAGTATGAAGGCTGCCCCTCAGCACAAAGGCTGCCCCTCAGTA
TGAAGGCTGCCCCTCAGCAGCCCAGCTGCCCCTCAG
|
|
gi|61888404|ref|XP_614428.1| |
Protein identifier
|
gi|61888404|ref|XP_614428.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
306-479, gnl|bosTau2|chr22 (11993261-11993088) |
|
306-479, gnl|canFam2|chr20 (11399758-11399617) |
|
306-479, gnl|danRer3|chr1 (14838330-14838435) |
|
306-479, gnl|dasNov1|scaffold_63843 (3391-3530) |
|
306-479, gnl|echTel1|scaffold_325473 (51013-51156) |
|
306-479, gnl|fr1|chrUn (112432207-112432352) |
|
306-479, gnl|hg17|chr3 (9886828-9886969) |
|
306-479, gnl|Hg17|chr3 (9887020-9886847) |
|
306-479, gnl|loxAfr1|scaffold_12207 (78118-78254) |
|
306-479, gnl|mm7|chr6 (113589304-113589444) |
|
306-479, gnl|Mm7|chr6 (113589493-113589322) |
|
306-479, gnl|monDom2|scaffold_5 (36639101-36639235) |
|
306-479, gnl|oryCun1|scaffold_209265 (30277-30138) |
|
306-479, gnl|panTro1|chr2 (10262045-10262186) |
|
306-479, gnl|rheMac2|chr2 (51098060-51097922) |
|
306-479, gnl|rn3|chr4 (149559175-149559315) |
|
306-479, gnl|tetNig1|chr11 (1016427-1016546) |
|
306-479, gnl|xenTro1|scaffold_395 (1147515-1147643) |
| |
|
550-743, gnl|bosTau2|chr11 (16221017-16221210) |
|
550-743, gnl|Hg17|chr2 (38674308-38674144) |
|
550-743, gnl|Mm7|chr17 (78314420-78314199) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
306-479, gnl|bosTau2|chr22 (11993261-11993088) |
|
306-479, gnl|canFam2|chr20 (11399758-11399617) |
|
306-479, gnl|danRer3|chr1 (14838330-14838435) |
|
306-479, gnl|dasNov1|scaffold_63843 (3391-3530) |
|
306-479, gnl|echTel1|scaffold_325473 (51013-51156) |
|
306-479, gnl|fr1|chrUn (112432207-112432352) |
|
306-479, gnl|hg17|chr3 (9886828-9886969) |
|
306-479, gnl|Hg17|chr3 (9887020-9886847) |
|
306-479, gnl|loxAfr1|scaffold_12207 (78118-78254) |
|
306-479, gnl|mm7|chr6 (113589304-113589444) |
|
306-479, gnl|Mm7|chr6 (113589493-113589322) |
|
306-479, gnl|monDom2|scaffold_5 (36639101-36639235) |
|
306-479, gnl|oryCun1|scaffold_209265 (30277-30138) |
|
306-479, gnl|panTro1|chr2 (10262045-10262186) |
|
306-479, gnl|rheMac2|chr2 (51098060-51097922) |
|
306-479, gnl|rn3|chr4 (149559175-149559315) |
|
306-479, gnl|tetNig1|chr11 (1016427-1016546) |
|
306-479, gnl|xenTro1|scaffold_395 (1147515-1147643) |
| |
|
550-743, gnl|bosTau2|chr11 (16221017-16221210) |
|
550-743, gnl|Hg17|chr2 (38674308-38674144) |
|
550-743, gnl|Mm7|chr17 (78314420-78314199) |
|
nje (0.66368) |
|
jej (0.494609) |
|
med (0.465008) |
|
eje (0.197668) |
|
nlu (0.191681) |
|
ill (0.175593) |
|
cli (0.152812) |
|
jca (0.11396) |
|
nje (0.66368) |
|
jej (0.494609) |
|
med (0.465008) |
|
eje (0.197668) |
|
nlu (0.191681) |
|
ill (0.175593) |
|
cli (0.152812) |
|
jca (0.11396) |
