Ss1.1-Lng1-LNG010066C05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCGGAGCTGAGAATGCGCGTGGGAGCCCAGCCGCCCAGGGCGCTCAGCTCAGCCCTCC TGCTCCTGGGGCTTGTGCTGGGCGCTGTAGCCCGGCTCACCTGTGTTGGGGACACCTACC CCAGTGGCAGGAGGTGCTGTAAAGAGTGCCAGCCAGGTTATGGGATGGAGAGGCGCTGCA CCGACACTCAGGAAACCGAGTGCAGCCGGTGCAAGCCCGGCTTCTACAACGAGGCAGTGA ACTACGAGCCCTGCAAACCCTGCACCCAGTGCAACCAGCGAAGTGGAAGTGAGGTCAAGC AGCGATGCACAAACACGACAGACACCGTGTGCGGCTGCCGGCCGGGCACGCAGCCCCAGG ACGGCTTCGGCTACAAGCGTGGAGTTGACTGTGTGCGGTGCCCACCTGGACACTTCTCCC CGGGCAACGACCAGGCCTGCCAGCCCTGGACCAACTGCACCTTGGTGGGGAAGCGAACGC TGCAGGCGGCCAGCAACAGCTCAGATGCCGTCTGTGAGGACAGGAGCCCACCAGCCACAC CGCCCCAAGAGACCCAGGGCCCCCCAGCCCGGTCCCCCACTGCTCGGCCCACCACTGCCT GGCCAAGGACCTCACAGGAACCCTCGACGCCCCACACAGAGTCCCCCAAGGGCCCTGAAC TGGCTGCCGTCCTGGGCCTGGGCCTGGGCCTGGTCCTGCTGGCGCCCGTGGCTGCTGTGC TGGTCCTGCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCGGAGCTGAGAATGCGCGTGGGAGCCCAGCCGCCCAGGGCGCTCAGCTCAGCCCTCC TGCTCCTGGGGCTTGTGCTGGGCGCTGTAGCCCGGCTCACCTGTGTTGGGGACACCTACC CCAGTGGCAGGAGGTGCTGTAAAGAGTGCCAGCCAGGTTATGGGATGGAGAGGCGCTGCA CCGACACTCAGGAAACCGAGTGCAGCCGGTGCAAGCCCGGCTTCTACAACGAGGCAGTGA ACTACGAGCCCTGCAAACCCTGCACCCAGTGCAACCAGCGAAGTGGAAGTGAGGTCAAGC AGCGATGCACAAACACGACAGACACCGTGTGCGGCTGCCGGCCGGGCACGCAGCCCCAGG ACGGCTTCGGCTACAAGCGTGGAGTTGACTGTGTGCGGTGCCCACCTGGACACTTCTCCC CGGGCAACGACCAGGCCTGCCAGCCCTGGACCAACTGCACCTTGGTGGGGAAGCGAACGC TGCAGGCGGCCAGCAACAGCTCAGATGCCGTCTGTGAGGACAGGAGCCCACCAGCCACAC CGCCCCAAGAGACCCAGGGCCCCCCAGCCCGGTCCCCCACTGCTCGGCCCACCACTGCCT GGCCAAGGACCTCACAGGAACCCTCGACGCCCCACACAGAGTCCCCCAAGGGCCCTGAAC TGGCTGCCGTCCTGGGCCTGGGCCTGGGCCTGGTCCTGCTGGCGCCCGTGGCTGCTGTGC TGGTCCTGCTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 5-158, gnl|bosTau2|chr16 (38002269-38002422) | |
| 5-158, gnl|canFam2|chr5 (59405365-59405620) | |
| 5-158, gnl|dasNov1|scaffold_271136 (950-1168) | |
| 5-158, gnl|hg17|chr1 (1189282-1189533) | |
| 5-158, gnl|Hg17|chr1 (1189440-1189284) | |
| 5-158, gnl|loxAfr1|scaffold_56986 (753-524) | |
| 5-158, gnl|mm7|chr4 (155003554-155003310) | |
| 5-158, gnl|Mm7|chr4 (155003406-155003550) | |
| 5-158, gnl|monDom2|scaffold_167 (102432-102748) | |
| 5-158, gnl|panTro1|chr1 (1074826-1075077) | |
| 5-158, gnl|rheMac2|chr1 (4287272-4287533) | |
| 5-158, gnl|rn3|chr5 (172866995-172866754) | |
| 251-387, gnl|bosTau2|chr16 (38003191-38003324) | |
| 251-387, gnl|canFam2|chr5 (59404240-59404470) | |
| 251-387, gnl|dasNov1|scaffold_271136 (314-445) | |
| 251-387, gnl|hg17|chr1 (1188206-1188425) | |
| 251-387, gnl|Hg17|chr1 (1188437-1188295) | |
| 251-387, gnl|loxAfr1|scaffold_56986 (1860-1657) | |
| 251-387, gnl|mm7|chr4 (155004623-155004413) | |
| 251-387, gnl|Mm7|chr4 (155004408-155004551) | |
| 251-387, gnl|monDom2|scaffold_167 (101495-101649) | |
| 251-387, gnl|rheMac2|chr1 (4286273-4286427) | |
| 251-387, gnl|rn3|chr5 (172868099-172867847) | |
| 452-652, gnl|bosTau2|chr16 (38004202-38004402) | |
| 452-652, gnl|Hg17|chr1 (1187444-1187244) | |
| 452-652, gnl|Mm7|chr4 (155005417-155005617) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-158, gnl|bosTau2|chr16 (38002269-38002422) | |
| 5-158, gnl|canFam2|chr5 (59405365-59405620) | |
| 5-158, gnl|dasNov1|scaffold_271136 (950-1168) | |
| 5-158, gnl|hg17|chr1 (1189282-1189533) | |
| 5-158, gnl|Hg17|chr1 (1189440-1189284) | |
| 5-158, gnl|loxAfr1|scaffold_56986 (753-524) | |
| 5-158, gnl|mm7|chr4 (155003554-155003310) | |
| 5-158, gnl|Mm7|chr4 (155003406-155003550) | |
| 5-158, gnl|monDom2|scaffold_167 (102432-102748) | |
| 5-158, gnl|panTro1|chr1 (1074826-1075077) | |
| 5-158, gnl|rheMac2|chr1 (4287272-4287533) | |
| 5-158, gnl|rn3|chr5 (172866995-172866754) | |
| 251-387, gnl|bosTau2|chr16 (38003191-38003324) | |
| 251-387, gnl|canFam2|chr5 (59404240-59404470) | |
| 251-387, gnl|dasNov1|scaffold_271136 (314-445) | |
| 251-387, gnl|hg17|chr1 (1188206-1188425) | |
| 251-387, gnl|Hg17|chr1 (1188437-1188295) | |
| 251-387, gnl|loxAfr1|scaffold_56986 (1860-1657) | |
| 251-387, gnl|mm7|chr4 (155004623-155004413) | |
| 251-387, gnl|Mm7|chr4 (155004408-155004551) | |
| 251-387, gnl|monDom2|scaffold_167 (101495-101649) | |
| 251-387, gnl|rheMac2|chr1 (4286273-4286427) | |
| 251-387, gnl|rn3|chr5 (172868099-172867847) | |
| 452-652, gnl|bosTau2|chr16 (38004202-38004402) | |
| 452-652, gnl|Hg17|chr1 (1187444-1187244) | |
| 452-652, gnl|Mm7|chr4 (155005417-155005617) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.132153) | |
| cty (0.10408) |