Non-Coding RNA Search

Ss1.1-Lng1-LNG010067A04.5

Sequence:


               
               GCCCTGGATTACGAAGGGGGCACCGTGACTTTCACCAACGCAGAGTCACAAGAACTCATC
TATACCTTCAAGGCCACCTTCACCCGGCGTCTGCTCCCCTTCCTGTGGCTCAGGTGGCCG
GGAACACGCCTCCTGCTGAGACCCTGAGCCCCGACTCTGCTCCCGGCTCCACCCCCACCG
ATGCCTCAGGTCTCTGGGCTCTGACGGGGGAGGAGAGGCCAATGGAGCACCTCGAGCAGG
CGAGGGGAGGAACCCCCAGTCGGCCGCCACTCCCTCCTTGTGGCTGTGGCCCCCTTGGGA
CCTCACCCAGTGCTATTCCCTCTGTCCAGCCCTCTTCTCCCACCTCCGGAGGTTCCTGTG
CGGACTTCCAACCCTGAAGTCCATGAGGGCTCCTCCCTCCTGCCCACTGCCTTCAACCCA
GCCCCAGCCTCTCCTTGGCGAGCAGAGGCAAGGCAGCATTTTCTTGCCCCCCTGTTCTTG
GGAAAGACCAAACTGGTCTTTGGTCTTGGTACACCCAAGGCCATTTTTCTGTCCTCCAAT
CCCATGACTTCCCCTTTGCCCAAATCTGCTTCTTTACCTGCCTTCCCTGGCCCTTTAAAC
ACACCTGCTGCCGCCCTGACTCAGAGTTAAAGGCACATGGAAATGTTGGACATGAACTGA
GTGGCAGTCCACTGAGACTTCCCAGGTCGTTAAGGTGCCTGGGGCCAGTGGAAAGCATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCTGGATTACGAAGGGGGCACCGTGACTTTCACCAACGCAGAGTCACAAGAACTCATC
TATACCTTCAAGGCCACCTTCACCCGGCGTCTGCTCCCCTTCCTGTGGCTCAGGTGGCCG
GGAACACGCCTCCTGCTGAGACCCTGAGCCCCGACTCTGCTCCCGGCTCCACCCCCACCG
ATGCCTCAGGTCTCTGGGCTCTGACGGGGGAGGAGAGGCCAATGGAGCACCTCGAGCAGG
CGAGGGGAGGAACCCCCAGTCGGCCGCCACTCCCTCCTTGTGGCTGTGGCCCCCTTGGGA
CCTCACCCAGTGCTATTCCCTCTGTCCAGCCCTCTTCTCCCACCTCCGGAGGTTCCTGTG
CGGACTTCCAACCCTGAAGTCCATGAGGGCTCCTCCCTCCTGCCCACTGCCTTCAACCCA
GCCCCAGCCTCTCCTTGGCGAGCAGAGGCAAGGCAGCATTTTCTTGCCCCCCTGTTCTTG
GGAAAGACCAAACTGGTCTTTGGTCTTGGTACACCCAAGGCCATTTTTCTGTCCTCCAAT
CCCATGACTTCCCCTTTGCCCAAATCTGCTTCTTTACCTGCCTTCCCTGGCCCTTTAAAC
ACACCTGCTGCCGCCCTGACTCAGAGTTAAAGGCACATGGAAATGTTGGACATGAACTGA
GTGGCAGTCCACTGAGACTTCCCAGGTCGTTAAGGTGCCTGGGGCCAGTGGAAAGCATCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-646, gnl|bosTau2|chr23 (23871758-23872394)
               

               
               1-646, gnl|Hg17|chr6 (30261778-30261098)
               

               
               1-646, gnl|Mm7|chr17 (35009787-35010518)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-646, gnl|bosTau2|chr23 (23871758-23872394)
               

               
               1-646, gnl|Hg17|chr6 (30261778-30261098)
               

               
               1-646, gnl|Mm7|chr17 (35009787-35010518)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jej (0.197844)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               nmm (0.132802)

	1-646, gnl\|bosTau2\|chr23 (23871758-23872394)
	1-646, gnl\|Hg17\|chr6 (30261778-30261098)
	1-646, gnl\|Mm7\|chr17 (35009787-35010518)