Non-Coding RNA Search

Ss1.1-Lng1-LNG010074H02.5

Sequence:


               
               CAGATGGCTCTTACCTCAGTGGTCGTCACGCTGTGGTACAGAGCGCCAGAAGTCTTGCTT
CAGTCCAGCTACGCCACCCCTGTGGACCTCTGGAGTGTTGGCTGCATATTTGCAGAAATG
TTTCGTAGAAAGTAAGAAATGCCTTTTTTTTTTCATTCTGTCTCTCTTGGAAATAAACTT
TCTGGGTCTTGGATAATTTAAGTGGCAGCCTAGCATCTGTTTCATGTAGGGTCACAGCAT
CCAGATCCACCTGCTTCCGCCTTCGAAGCCTGTCCCGAAACCACCTTCTCAGTCCTTAGA
GTGTGGCTAGTGTAGCTATAGCTTCCAGCTCTCAGAAACTCTGTTTGGAAAGGAAGACTT
CACTCTTGTTACAATGTATTTTGTCTTTGTTGGTGATGATAGGATGTGATAAACATGACA
TGGTGTTTTTTTCTTTTAGTGAGGAAATAGGTGGACTTTTCCACAAGAGGGGGACCAAGG
CTGTTAAGTATATGGAAATTTCGATGGTGGGAATAGTTGGGGGGAAGAAAAGAATGTGTG
TATTGAAAAGGCATAGGCAAGAAGGATGTCAGTGCTACTTCAGAATACTTTCAATGCTGT
CATGTGGAGGAGAGATTAGACATGTTCCAGGTCCTTAGAGAGCAGAGCTAGGACCAAAGA
TATTAAAATTACAAAAGTAAAGATTTTTGCTCAGAAGGTGAAAAAAATAATGATTGGTGT
TATCTGAAGAGAAGATTGGGGTTCCTGAAAATAGTGCATTCTCAATGGGTGTCCACAAAA
CTACACCACTCCATACTGGAGGTTTTTTCAGTGGTGTTCCTAGAATGAGTGGGTGCTGAG
AGGACTTCCAGGGACCCTCTGACTCTGAGAGTCTTGGACTCATTTGTTTGATTTTCAACT
TACAAGAAATAGCTAAACAATATAATAAAGATCGGATAGGAAAATGATGCATACCTGGGT
ACTGAATCCAGCCTGGTCAGAAATAAACAGAGAGCCTAATCCTAATCTAATCTCTCTTTG
TTTTCTCTTTTTATTTCCATGAGGACATGTGAGTTGGGAAGCTGAGTATTTTCCCATTGG
ACATGTTCAAAATGTAGCTAAAGGTGCAGTCGGCCATTGCTTGTTTGTTTGTTTTAACTA
AATCAAGTTTTGTGCACGTGACAAATTGGGGGACCCATTTCTAGACCTCTGCAAAGATTC
ATCTATAGCTCCCAGCGGGGGATCATGGCAGGATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGATGGCTCTTACCTCAGTGGTCGTCACGCTGTGGTACAGAGCGCCAGAAGTCTTGCTT
CAGTCCAGCTACGCCACCCCTGTGGACCTCTGGAGTGTTGGCTGCATATTTGCAGAAATG
TTTCGTAGAAAGTAAGAAATGCCTTTTTTTTTTCATTCTGTCTCTCTTGGAAATAAACTT
TCTGGGTCTTGGATAATTTAAGTGGCAGCCTAGCATCTGTTTCATGTAGGGTCACAGCAT
CCAGATCCACCTGCTTCCGCCTTCGAAGCCTGTCCCGAAACCACCTTCTCAGTCCTTAGA
GTGTGGCTAGTGTAGCTATAGCTTCCAGCTCTCAGAAACTCTGTTTGGAAAGGAAGACTT
CACTCTTGTTACAATGTATTTTGTCTTTGTTGGTGATGATAGGATGTGATAAACATGACA
TGGTGTTTTTTTCTTTTAGTGAGGAAATAGGTGGACTTTTCCACAAGAGGGGGACCAAGG
CTGTTAAGTATATGGAAATTTCGATGGTGGGAATAGTTGGGGGGAAGAAAAGAATGTGTG
TATTGAAAAGGCATAGGCAAGAAGGATGTCAGTGCTACTTCAGAATACTTTCAATGCTGT
CATGTGGAGGAGAGATTAGACATGTTCCAGGTCCTTAGAGAGCAGAGCTAGGACCAAAGA
TATTAAAATTACAAAAGTAAAGATTTTTGCTCAGAAGGTGAAAAAAATAATGATTGGTGT
TATCTGAAGAGAAGATTGGGGTTCCTGAAAATAGTGCATTCTCAATGGGTGTCCACAAAA
CTACACCACTCCATACTGGAGGTTTTTTCAGTGGTGTTCCTAGAATGAGTGGGTGCTGAG
AGGACTTCCAGGGACCCTCTGACTCTGAGAGTCTTGGACTCATTTGTTTGATTTTCAACT
TACAAGAAATAGCTAAACAATATAATAAAGATCGGATAGGAAAATGATGCATACCTGGGT
ACTGAATCCAGCCTGGTCAGAAATAAACAGAGAGCCTAATCCTAATCTAATCTCTCTTTG
TTTTCTCTTTTTATTTCCATGAGGACATGTGAGTTGGGAAGCTGAGTATTTTCCCATTGG
ACATGTTCAAAATGTAGCTAAAGGTGCAGTCGGCCATTGCTTGTTTGTTTGTTTTAACTA
AATCAAGTTTTGTGCACGTGACAAATTGGGGGACCCATTTCTAGACCTCTGCAAAGATTC
ATCTATAGCTCCCAGCGGGGGATCATGGCAGGATGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               21-1087, gnl|bosTau2|chr4 (4334319-4333257)
               

               
               21-1087, gnl|Hg17|chr7 (91945501-91944422)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-1087, gnl|bosTau2|chr4 (4334319-4333257)
               

               
               21-1087, gnl|Hg17|chr7 (91945501-91944422)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	21-1087, gnl\|bosTau2\|chr4 (4334319-4333257)
	21-1087, gnl\|Hg17\|chr7 (91945501-91944422)