Ss1.1-Lng1-LNG010079G07.5.5
|
GTGTGTGTGTGTGTGTGTGTGTGTGTTCAGTTTGGGCAGTCTGCATGTGCTTTTGCATTC
ATTCCTGCTTGAGTGTTCGTCCCACTGTGCTGCTGCTTCAGAGGGACATTTACTCAAGTG
CACATGACAAAGATCGAGTGAGGCTCACCGCATCCCCGACACTCTGTCCCTTGTGGGGAG
GCTGTGGGTGGTTAAAAGCCAGCATATTCCATGATGGATACAGCTCAAGTCAGCCTCAGA
CTGAAGCCTGCCGACCTGGGATGAGGCTGTGTGTAGACCTCAAACTGAGTTCTCAAATTC
GCAACACAAGATTCCCATTGGAGCCAAGGATTACAACACGACTTGTATGAGAGACCGCAC
CGTGGTTCCTGAAAGCCTCTGGCTGTGACTCAGACAGGACTAGAGTCACGCCGCCGAGGA
GGGTGTCACATTAATTCTCATGCTTTGGGGGTCTGCTTGAAAATGTAAATGCTGTTGAAA
GCCAAAGGAGAACGCATTTGAATTCACCTGCGTATGCCCCTAATAATAAAAGCTCAGACA
TTCTCCCTGCTGGCACCAAGTATTAGAATGAGTGAGCAGCTGACACGAGTGGTAAAAAGC
AAGGAGCATGTTCTGACCTTGTGCTGCAGACATCACTTGTGATTCTGTCTAGCGACTGGG
TGCTGTGGCCAACAGTGCAATGGCTTCACGTATTCAATTGCAATTGTTTTCTCTGCTCTT
CCCTGAGAAATCTAAAGTTGCTTGACCTTTCAGTGCTAGGCATGGGATGTTTGAGGACTG
TTCTCACAAATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGCGTGTGCACGCACATGCGTGCGCTTGTATGACCTATTAACATATGTAGCAAAGGGCTT
TGGCCAGGTGAAGGGAAGAGACTAGCTCATCCTTGAACTGAAGGCAGATGGCAGCCCACA
GCTTTGCCCCTGACACATTAGTTGCCTCTTGCTTCATTCCATGCACCCACTGTCCCATCT
TCTCTCTGATGCCTCCTGTATTGGCAGCCTCACCTGCGTGTTCTCATCCTTGCTGCACTC
TGGCAAAGTGTGTGGAGTGGGGACCACGGCATAATCCCAGTGTCTCCCTGCCTTGATCAA
GAACAAAGATGGCCAGATGGATCCTAGGGCTCAGCTGGTGGAGAGGTTTTCTTCACAGTG
GAGCTAGTAAAGGACCCTCAGTGGTTTTCATTGGCAAATGAATTATAACCCATGTCCTTG
TGGATCAAGTGTCAGTGTGTGAAAAATTGCAGTGATAGTTAAAGAACCGAGCCCTAAGTT
TGTACCTACTAATGAAACTCTGTTTGGCTTGTAGAACTTTTAAATTTAGTTCTGCATCCA
CCTTGTGGGGGTGGGGGGAAGCTTCTTTCCATATCAAATGTATTATTAGCTAATTTAAAC
TACACGCAAAAATGCATTGCCAGAAAATACCAGTGGCTTCCTGGCTACAAGCAGAGCGGT
GCTGTGTTCTGGGGAGGGGGCACTGGAAACTATAATGCAGCGTGGGCTCCCCAACCTCTC
TCCCCAGGAGAAGGCTCCAGCCAGAGGGAGAGGCCCCAACCCAGATCAATGGGCAGCAAC
GCCCTGTCTGTTTGGTTGAATTGAGTTCAGCATGCTTTTCCAGAAAATGTCCAGGTCGCT
GCACAGGAAATCAGTGTTCTCTGTTTGAACCCTACCCGGCATAAAAAATTCCAGTTGTCA
ACACTGGATTATTGACTCTAGGAAAGGAAGTATACACAGGGCAAGCTTCCCTGGTGCATA
CATAAAGGGCTAAGTTTTTGAGCATCGGGCTTGCTAGTGACTCTGAAAGCACACCCTGAT
GGCATGAACAAACCTCTATGACGGCACGAAGATCAGTGCTTCCTTTAAAGTTTCTTCCAG
AAAAGCCAGGAGACCATTTAGTCTTCCAGTGTGATTTATGTTGATACATAATAAAGAGCC
TTTGGAAACTCGTGCAGCTCGCTATGCGTCTGCATTTGGGTTTGGGGTTCCTTATGAAAC
GTTCTTAGTGTGACTTCTTCAATTATGAAAGATAAGCTGCCTGTTCTCTGAGACCTCGAA
CAAAAAAAGCTTGAGTCAGTGGGTCCTCAGGTGCAAAGGAAAAAAAAAAAAAAACTGATT
TTCTATCATGTCTCTGGTCTCTCCCACTTCTCCTAATTCTGTTGTTTCAAGCTGTTTCCT
TCTTCCAAGGTGGGCTGGAACAGCCCCCCTTTTCACTCCCATCCTCTGCATCTAGGGATT
CAATCAACTCTACTCGGAAAAGTCTTGCTGGAAATGTGTCTAAAACTTTCACCTAATTTC
TTTATACTTTTCCAGCCAACACCTTTTTTCTAAAGAATTGCTTCTCAGATGATTATGTAA
AGTAGATACGCTTTTGCAAGTTTAAAAATTCAAATGAACCCCTTTAGACTATGTAGGTCT
TTCTAAAACCTCTTGATGGCACACTCGGTGCCAGCGTGCTCCTGCGTGTTGAAGGGGCAG
GTGGCCCCTCCAGCTGAGGGCACCCCGAGCCCTCTTTCTGACCATCAGGAAGGACAGTGG
GAGGAAGATGAACTCTCTGCCATCAACCCTCCTGCGTCCTCTGAAGCAAGCTCAGTCGTT
ACCAAGCTCCTGGTGTATTTCCGGTTACTGTTTAATCTGTACTTCCTAGGACAGCCTTGA
TTTTATTTGACTTTTAAAATTAACCAAGTGTTTGTCAGGAGCCCTAAAACTCACTTATTA
ATACCCCCTTTTGGAGGATGGTCTATCCAGGAAAAAAAAAAAAAAAAAGATGATTTCAGG
CTTGCGATTTTAAGTGACATCACTTTATCGTGGCTATGTACATGAAAGGAACTACCTAAT
CATGTTGTGATGAAAGAAAGAGAAACTTTTACTTTGGCATTAAAAAAAAAAAAAAAATCG
CTGTCTTTTTGTTTGCTGCCCGAGACGCAGTGGGGAGACGGTGAATGATGCGCTTGGCAT
AGGGATCTTTGTGTTTTTTTGTTGGGGCAAGTTTCCTTTCTGACAAATTCAACAGGAAAG
GGGGAGGTGGTCTTTTAAACTGAGAGAAACTTTCTAAATAATATATGTGTACACAGCAAA
TTAAACCGATCTCATCTTTTCTGACGCCTCGTGTAATTGAGTGGCAATTGTCATCATTAA
ATAAAATCCTTCCCAAAAGTCTCTCCCAAGAGTGACGGTGCCATGAGTCGCTTTCTGAGC
CCGTTCAGCAAAGGTAGAGGAGACAGACTGCAGACACGAAGGCAGCCAGCCGCTTAGCGA
CTTGTCTACGGCTACGGACAAGACGACGAACATCCACGGGACTTGTGTTCTTTGGGAGTG
TTTTGTACAGACTCGTTCAGTAATAAACGTATGTGGTTTCTGGAAGTTGCCAACAGCCCT
GCATCGAAGCTCTTGCAGTTCTTTCATTTTTAAGTTGGGTTTAATGGAATTTTTGAAGGC
ATACTCTTCTTCCTGCCTCCCCCGCCCCCACCCCATCCCTTCCAGAAACACGAAAGCCAA
TGTTTGGAAGAAATGCTGTTTAAAAGATGTATCGTGTCCCCCATGAAAGTGAGTGGGTGT
TTGTCAGGGTCCCGAGTGCCACGTACCAGTGTGCAGAGGCGGGTGGCCCTGGGCCCTGGA
TGCTGTGCTTAACGTGCCCAACCTGCTCCACGCTCCTGTTGAAAGCAGCACCTGCTGCCC
CTCTGCCGCTGTCCTACGTTACTGTTGTCCTCCCAACTCAGTGAATAAAGCATCTTTATT
CGTAAAAAAAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GTGTGTGTGTGTGTGTGTGTGTGTGTTCAGTTTGGGCAGTCTGCATGTGCTTTTGCATTC
ATTCCTGCTTGAGTGTTCGTCCCACTGTGCTGCTGCTTCAGAGGGACATTTACTCAAGTG
CACATGACAAAGATCGAGTGAGGCTCACCGCATCCCCGACACTCTGTCCCTTGTGGGGAG
GCTGTGGGTGGTTAAAAGCCAGCATATTCCATGATGGATACAGCTCAAGTCAGCCTCAGA
CTGAAGCCTGCCGACCTGGGATGAGGCTGTGTGTAGACCTCAAACTGAGTTCTCAAATTC
GCAACACAAGATTCCCATTGGAGCCAAGGATTACAACACGACTTGTATGAGAGACCGCAC
CGTGGTTCCTGAAAGCCTCTGGCTGTGACTCAGACAGGACTAGAGTCACGCCGCCGAGGA
GGGTGTCACATTAATTCTCATGCTTTGGGGGTCTGCTTGAAAATGTAAATGCTGTTGAAA
GCCAAAGGAGAACGCATTTGAATTCACCTGCGTATGCCCCTAATAATAAAAGCTCAGACA
TTCTCCCTGCTGGCACCAAGTATTAGAATGAGTGAGCAGCTGACACGAGTGGTAAAAAGC
AAGGAGCATGTTCTGACCTTGTGCTGCAGACATCACTTGTGATTCTGTCTAGCGACTGGG
TGCTGTGGCCAACAGTGCAATGGCTTCACGTATTCAATTGCAATTGTTTTCTCTGCTCTT
CCCTGAGAAATCTAAAGTTGCTTGACCTTTCAGTGCTAGGCATGGGATGTTTGAGGACTG
TTCTCACAAATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGCGTGTGCACGCACATGCGTGCGCTTGTATGACCTATTAACATATGTAGCAAAGGGCTT
TGGCCAGGTGAAGGGAAGAGACTAGCTCATCCTTGAACTGAAGGCAGATGGCAGCCCACA
GCTTTGCCCCTGACACATTAGTTGCCTCTTGCTTCATTCCATGCACCCACTGTCCCATCT
TCTCTCTGATGCCTCCTGTATTGGCAGCCTCACCTGCGTGTTCTCATCCTTGCTGCACTC
TGGCAAAGTGTGTGGAGTGGGGACCACGGCATAATCCCAGTGTCTCCCTGCCTTGATCAA
GAACAAAGATGGCCAGATGGATCCTAGGGCTCAGCTGGTGGAGAGGTTTTCTTCACAGTG
GAGCTAGTAAAGGACCCTCAGTGGTTTTCATTGGCAAATGAATTATAACCCATGTCCTTG
TGGATCAAGTGTCAGTGTGTGAAAAATTGCAGTGATAGTTAAAGAACCGAGCCCTAAGTT
TGTACCTACTAATGAAACTCTGTTTGGCTTGTAGAACTTTTAAATTTAGTTCTGCATCCA
CCTTGTGGGGGTGGGGGGAAGCTTCTTTCCATATCAAATGTATTATTAGCTAATTTAAAC
TACACGCAAAAATGCATTGCCAGAAAATACCAGTGGCTTCCTGGCTACAAGCAGAGCGGT
GCTGTGTTCTGGGGAGGGGGCACTGGAAACTATAATGCAGCGTGGGCTCCCCAACCTCTC
TCCCCAGGAGAAGGCTCCAGCCAGAGGGAGAGGCCCCAACCCAGATCAATGGGCAGCAAC
GCCCTGTCTGTTTGGTTGAATTGAGTTCAGCATGCTTTTCCAGAAAATGTCCAGGTCGCT
GCACAGGAAATCAGTGTTCTCTGTTTGAACCCTACCCGGCATAAAAAATTCCAGTTGTCA
ACACTGGATTATTGACTCTAGGAAAGGAAGTATACACAGGGCAAGCTTCCCTGGTGCATA
CATAAAGGGCTAAGTTTTTGAGCATCGGGCTTGCTAGTGACTCTGAAAGCACACCCTGAT
GGCATGAACAAACCTCTATGACGGCACGAAGATCAGTGCTTCCTTTAAAGTTTCTTCCAG
AAAAGCCAGGAGACCATTTAGTCTTCCAGTGTGATTTATGTTGATACATAATAAAGAGCC
TTTGGAAACTCGTGCAGCTCGCTATGCGTCTGCATTTGGGTTTGGGGTTCCTTATGAAAC
GTTCTTAGTGTGACTTCTTCAATTATGAAAGATAAGCTGCCTGTTCTCTGAGACCTCGAA
CAAAAAAAGCTTGAGTCAGTGGGTCCTCAGGTGCAAAGGAAAAAAAAAAAAAAACTGATT
TTCTATCATGTCTCTGGTCTCTCCCACTTCTCCTAATTCTGTTGTTTCAAGCTGTTTCCT
TCTTCCAAGGTGGGCTGGAACAGCCCCCCTTTTCACTCCCATCCTCTGCATCTAGGGATT
CAATCAACTCTACTCGGAAAAGTCTTGCTGGAAATGTGTCTAAAACTTTCACCTAATTTC
TTTATACTTTTCCAGCCAACACCTTTTTTCTAAAGAATTGCTTCTCAGATGATTATGTAA
AGTAGATACGCTTTTGCAAGTTTAAAAATTCAAATGAACCCCTTTAGACTATGTAGGTCT
TTCTAAAACCTCTTGATGGCACACTCGGTGCCAGCGTGCTCCTGCGTGTTGAAGGGGCAG
GTGGCCCCTCCAGCTGAGGGCACCCCGAGCCCTCTTTCTGACCATCAGGAAGGACAGTGG
GAGGAAGATGAACTCTCTGCCATCAACCCTCCTGCGTCCTCTGAAGCAAGCTCAGTCGTT
ACCAAGCTCCTGGTGTATTTCCGGTTACTGTTTAATCTGTACTTCCTAGGACAGCCTTGA
TTTTATTTGACTTTTAAAATTAACCAAGTGTTTGTCAGGAGCCCTAAAACTCACTTATTA
ATACCCCCTTTTGGAGGATGGTCTATCCAGGAAAAAAAAAAAAAAAAAGATGATTTCAGG
CTTGCGATTTTAAGTGACATCACTTTATCGTGGCTATGTACATGAAAGGAACTACCTAAT
CATGTTGTGATGAAAGAAAGAGAAACTTTTACTTTGGCATTAAAAAAAAAAAAAAAATCG
CTGTCTTTTTGTTTGCTGCCCGAGACGCAGTGGGGAGACGGTGAATGATGCGCTTGGCAT
AGGGATCTTTGTGTTTTTTTGTTGGGGCAAGTTTCCTTTCTGACAAATTCAACAGGAAAG
GGGGAGGTGGTCTTTTAAACTGAGAGAAACTTTCTAAATAATATATGTGTACACAGCAAA
TTAAACCGATCTCATCTTTTCTGACGCCTCGTGTAATTGAGTGGCAATTGTCATCATTAA
ATAAAATCCTTCCCAAAAGTCTCTCCCAAGAGTGACGGTGCCATGAGTCGCTTTCTGAGC
CCGTTCAGCAAAGGTAGAGGAGACAGACTGCAGACACGAAGGCAGCCAGCCGCTTAGCGA
CTTGTCTACGGCTACGGACAAGACGACGAACATCCACGGGACTTGTGTTCTTTGGGAGTG
TTTTGTACAGACTCGTTCAGTAATAAACGTATGTGGTTTCTGGAAGTTGCCAACAGCCCT
GCATCGAAGCTCTTGCAGTTCTTTCATTTTTAAGTTGGGTTTAATGGAATTTTTGAAGGC
ATACTCTTCTTCCTGCCTCCCCCGCCCCCACCCCATCCCTTCCAGAAACACGAAAGCCAA
TGTTTGGAAGAAATGCTGTTTAAAAGATGTATCGTGTCCCCCATGAAAGTGAGTGGGTGT
TTGTCAGGGTCCCGAGTGCCACGTACCAGTGTGCAGAGGCGGGTGGCCCTGGGCCCTGGA
TGCTGTGCTTAACGTGCCCAACCTGCTCCACGCTCCTGTTGAAAGCAGCACCTGCTGCCC
CTCTGCCGCTGTCCTACGTTACTGTTGTCCTCCCAACTCAGTGAATAAAGCATCTTTATT
CGTAAAAAAAAAAAAAAAAAAAAA
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28-497, gnl|bosTau2|chr26 (21999928-21999446) |
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28-497, gnl|canFam2|chr28 (28259117-28260205) |
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28-497, gnl|hg17|chr10 (116183827-116184856) |
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28-497, gnl|Hg17|chr10 (116184817-116184360) |
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28-497, gnl|loxAfr1|scaffold_360 (41935-40869) |
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28-497, gnl|mm7|chr19 (56951350-56952180) |
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28-497, gnl|Mm7|chr19 (56952160-56951743) |
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28-497, gnl|monDom2|scaffold_14 (47497965-47496816) |
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28-497, gnl|oryCun1|scaffold_200326 (130106-129113) |
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28-497, gnl|panTro1|chr8 (118348493-118349500) |
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28-497, gnl|rheMac2|chr9 (114086994-114087989) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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28-497, gnl|bosTau2|chr26 (21999928-21999446) |
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28-497, gnl|canFam2|chr28 (28259117-28260205) |
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28-497, gnl|hg17|chr10 (116183827-116184856) |
|
28-497, gnl|Hg17|chr10 (116184817-116184360) |
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28-497, gnl|loxAfr1|scaffold_360 (41935-40869) |
|
28-497, gnl|mm7|chr19 (56951350-56952180) |
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28-497, gnl|Mm7|chr19 (56952160-56951743) |
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28-497, gnl|monDom2|scaffold_14 (47497965-47496816) |
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28-497, gnl|oryCun1|scaffold_200326 (130106-129113) |
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28-497, gnl|panTro1|chr8 (118348493-118349500) |
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28-497, gnl|rheMac2|chr9 (114086994-114087989) |
|
che (1.9084) |
|
hlv (1.67108) |
|
hea (1.02249) |
|
amn (0.835422) |
|
cbl (0.688784) |
|
duo (0.518403) |
|
spl (0.429553) |
|
elu (0.385356) |
|
bla (0.373042) |
|
cty (0.31224) |
|
lnt (0.284616) |
|
cst (0.280073) |
|
cly (0.241284) |
|
med (0.232504) |
|
nms (0.213858) |
|
fli (0.202881) |
|
jej (0.197844) |
|
aor (0.195274) |
|
col (0.195008) |
|
gul (0.177588) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cje (0.165235) |
|
csp (0.161186) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
eje (0.0988338) |
|
che (1.9084) |
|
hlv (1.67108) |
|
hea (1.02249) |
|
amn (0.835422) |
|
cbl (0.688784) |
|
duo (0.518403) |
|
spl (0.429553) |
|
elu (0.385356) |
|
bla (0.373042) |
|
cty (0.31224) |
|
lnt (0.284616) |
|
cst (0.280073) |
|
cly (0.241284) |
|
med (0.232504) |
|
nms (0.213858) |
|
fli (0.202881) |
|
jej (0.197844) |
|
aor (0.195274) |
|
col (0.195008) |
|
gul (0.177588) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cje (0.165235) |
|
csp (0.161186) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
jca (0.11396) |
|
eje (0.0988338) |
