Non-Coding RNA Search

Ss1.1-Lng1-LNG010080F07.5

Sequence:


               
               AGAAGTCTCTGGTCCTGCTCCGAGAGGTGACAGACGGGTCCCTCTATGAAGGCGTTGCAT
ATGGCAGCTATACCACTAGATCACTCTTTCAGTATATGTTTCTTGTTCAGAGGCACTTTG
ACATCAACCACTTTGGCCACCCATGGCTTAAACAACACTTTGCATTTATGTATAGAACCA
TCCTGCCAGGGTTTCAAAGAACTGTGGCTATTGCAGACTCAAATTACAACTGGTTTTATG
GTCCAGAAAGCCAATTAGTATTCCTGGATAAGTTTGTCATGCGTAATGGCAGTGGGAACT
GGTTGGCTGACCAAATCAGAAGGAACCGTGTGCTGGAAGGCCCAGGAACGCCGTCCAAAG
GGCAGCGCTGGTGTACCCTTCACACAGAATTTCTCTGGTATGATGCCAGCTTGAAATCTG
TTCCCCCTCCAGATTTTGGCATCCCGACGTTGCATTATTTTGAAGACTGGGGTGTTGTGA
CTTATGGGAGTGCGCTGCCTGCAGAAATCAATAGATCTTTCCTTTCCTTCAAGTCCGGAA
AACTTGGGGGCCGTGCAATATATGACATCGTCCACAGAAACAAATACAAAGACTGGATCA
AAGGCTGGAGAAATTTTAATGCAGGGCACGAACATCCTGATCAAAACTCGTTTACTTTTG
CCCCCAATGGCGTGCCTTTCATTACCGAGGCTCTCTATGGGCCAAAGTACACCTTCTTCA
ACAACGTGTTGATGTTTTCCCCAGCTGTGTCCAAGAGCTGCTTTTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTCTCTGGTCCTGCTCCGAGAGGTGACAGACGGGTCCCTCTATGAAGGCGTTGCAT
ATGGCAGCTATACCACTAGATCACTCTTTCAGTATATGTTTCTTGTTCAGAGGCACTTTG
ACATCAACCACTTTGGCCACCCATGGCTTAAACAACACTTTGCATTTATGTATAGAACCA
TCCTGCCAGGGTTTCAAAGAACTGTGGCTATTGCAGACTCAAATTACAACTGGTTTTATG
GTCCAGAAAGCCAATTAGTATTCCTGGATAAGTTTGTCATGCGTAATGGCAGTGGGAACT
GGTTGGCTGACCAAATCAGAAGGAACCGTGTGCTGGAAGGCCCAGGAACGCCGTCCAAAG
GGCAGCGCTGGTGTACCCTTCACACAGAATTTCTCTGGTATGATGCCAGCTTGAAATCTG
TTCCCCCTCCAGATTTTGGCATCCCGACGTTGCATTATTTTGAAGACTGGGGTGTTGTGA
CTTATGGGAGTGCGCTGCCTGCAGAAATCAATAGATCTTTCCTTTCCTTCAAGTCCGGAA
AACTTGGGGGCCGTGCAATATATGACATCGTCCACAGAAACAAATACAAAGACTGGATCA
AAGGCTGGAGAAATTTTAATGCAGGGCACGAACATCCTGATCAAAACTCGTTTACTTTTG
CCCCCAATGGCGTGCCTTTCATTACCGAGGCTCTCTATGGGCCAAAGTACACCTTCTTCA
ACAACGTGTTGATGTTTTCCCCAGCTGTGTCCAAGAGCTGCTTTTCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               33-736, gnl|bosTau2|chr24 (9454488-9453788)
               

               
               33-736, gnl|Hg17|chr18 (63332018-63331318)
               

               
               33-736, gnl|Mm7|chr1 (111761105-111760405)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-736, gnl|bosTau2|chr24 (9454488-9453788)
               

               
               33-736, gnl|Hg17|chr18 (63332018-63331318)
               

               
               33-736, gnl|Mm7|chr1 (111761105-111760405)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jca (0.11396)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	33-736, gnl\|bosTau2\|chr24 (9454488-9453788)
	33-736, gnl\|Hg17\|chr18 (63332018-63331318)
	33-736, gnl\|Mm7\|chr1 (111761105-111760405)