Ss1.1-Lng1-LNG010081H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCGCTATATGGTAGCTGACAAATTTTCAGAGCTCCAGAGAGCTGTGGGTCCTAAAATCA CCCTGAATGACCTCATCCCCGCCTTTCAGAACCTACTTAAAGACTGTGAAGCTGAAGTCC GAGCAGCTGCTGCCCACAAAGTAAAAGAACTTTGTGAGAACTTGCCCATTGAAGGTAGAG AGACCATAATTATGAATCAAATTCTGCCCTGTATAAAGGAATTAGTATCCGATACAAATC AACATGTCAAATCGGCTCTAGCTTCTGTAATTATGGGATTGTCTACCATTTTGGGCAAAG AGAATACCATTGAACACCTTCTACCTCTTTTTCTAGCTCAGTTAAAGGATGAGTGTCCTG AAGTTCGTTTGAATATCATCTCCAATTTGGATTGTGTGAATGAAGTGATTGGAATCCGGC AGCTCTCCCAGTCACTCCTTCCTGCCATCGTGGAGCTGGCTGAAGATGCCAAGTGGAGGG TCCGGCTGGCCATCATTGAGTATATGCCGCTGCTGGCGGGCCAGCTGGGTGTGGAGTTCT TTGATGAAAAGCTGAATTCTTTATGTATGGCCTGGCTTGTGGACCATGTGTATGCCATCC GTGAAGCTGCCACCAACAACCTCATGAAACTAGTTCAGAAGTTTGGTACAGAGTGGGCCC AAAACACCATCGTTCCCAAGGTGTTAGTAATGGCCAATGATCCTAATTACTTACATAGAA TGACCACTTTATTCTGCATTAATGTGCTGTCTGAAGCCTGTGGCCAGGAAATAACCACTA AGCAGATGCTGCCTATTGTATTGAAAATGGCCGGAGACCAAGTAGCAAATGTCCGATTCA ACGTGGCCAAATCTCTACAGAAAATTGGACCAATTCTAGATACTGATGCTTTGCAGGAGG AAGTTAAGCCGGTACTACAGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCGCTATATGGTAGCTGACAAATTTTCAGAGCTCCAGAGAGCTGTGGGTCCTAAAATCA CCCTGAATGACCTCATCCCCGCCTTTCAGAACCTACTTAAAGACTGTGAAGCTGAAGTCC GAGCAGCTGCTGCCCACAAAGTAAAAGAACTTTGTGAGAACTTGCCCATTGAAGGTAGAG AGACCATAATTATGAATCAAATTCTGCCCTGTATAAAGGAATTAGTATCCGATACAAATC AACATGTCAAATCGGCTCTAGCTTCTGTAATTATGGGATTGTCTACCATTTTGGGCAAAG AGAATACCATTGAACACCTTCTACCTCTTTTTCTAGCTCAGTTAAAGGATGAGTGTCCTG AAGTTCGTTTGAATATCATCTCCAATTTGGATTGTGTGAATGAAGTGATTGGAATCCGGC AGCTCTCCCAGTCACTCCTTCCTGCCATCGTGGAGCTGGCTGAAGATGCCAAGTGGAGGG TCCGGCTGGCCATCATTGAGTATATGCCGCTGCTGGCGGGCCAGCTGGGTGTGGAGTTCT TTGATGAAAAGCTGAATTCTTTATGTATGGCCTGGCTTGTGGACCATGTGTATGCCATCC GTGAAGCTGCCACCAACAACCTCATGAAACTAGTTCAGAAGTTTGGTACAGAGTGGGCCC AAAACACCATCGTTCCCAAGGTGTTAGTAATGGCCAATGATCCTAATTACTTACATAGAA TGACCACTTTATTCTGCATTAATGTGCTGTCTGAAGCCTGTGGCCAGGAAATAACCACTA AGCAGATGCTGCCTATTGTATTGAAAATGGCCGGAGACCAAGTAGCAAATGTCCGATTCA ACGTGGCCAAATCTCTACAGAAAATTGGACCAATTCTAGATACTGATGCTTTGCAGGAGG AAGTTAAGCCGGTACTACAGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 352-528, gnl|bosTau2|chr18 (51562662-51562838) | |
| 352-528, gnl|canFam2|chr1 (107861828-107861615) | |
| 352-528, gnl|danRer3|chr5 (64313542-64313725) | |
| 352-528, gnl|dasNov1|scaffold_31326 (3691-3472) | |
| 352-528, gnl|echTel1|scaffold_227777 (1362-1533) | |
| 352-528, gnl|fr1|chrUn (167222241-167222446) | |
| 352-528, gnl|galGal2|chrUn (111280883-111281097) | |
| 352-528, gnl|hg17|chr19 (57414748-57414971) | |
| 352-528, gnl|Hg17|chr19 (57414754-57414930) | |
| 352-528, gnl|loxAfr1|scaffold_36421 (20849-21035) | |
| 352-528, gnl|mm7|chr17 (19136782-19136999) | |
| 352-528, gnl|Mm7|chr17 (19136786-19136963) | |
| 352-528, gnl|monDom2|scaffold_212 (661764-661546) | |
| 352-528, gnl|oryCun1|scaffold_211749 (71214-71023) | |
| 352-528, gnl|panTro1|chr20 (54843767-54843990) | |
| 352-528, gnl|rheMac2|chr19 (58280558-58280781) | |
| 352-528, gnl|rn3|chr1 (58458742-58458955) | |
| 352-528, gnl|tetNig1|chrUn_random (90532509-90532316) | |
| 352-528, gnl|xenTro1|scaffold_285 (254278-254467) | |
| 588-746, gnl|bosTau2|chr18 (51563839-51563997) | |
| 588-746, gnl|canFam2|chr1 (107860683-107860523) | |
| 588-746, gnl|danRer3|chr5 (64314181-64314341) | |
| 588-746, gnl|dasNov1|scaffold_1033 (62283-62123) | |
| 588-746, gnl|echTel1|scaffold_227777 (1595-1750) | |
| 588-746, gnl|fr1|chrUn (167223418-167223578) | |
| 588-746, gnl|hg17|chr19 (57416044-57416204) | |
| 588-746, gnl|Hg17|chr19 (57416043-57416201) | |
| 588-746, gnl|loxAfr1|scaffold_218282 (202-42) | |
| 588-746, gnl|mm7|chr17 (19137908-19138068) | |
| 588-746, gnl|Mm7|chr17 (19137907-19138065) | |
| 588-746, gnl|monDom2|scaffold_212 (659050-658890) | |
| 588-746, gnl|oryCun1|scaffold_185673 (6946-7108) | |
| 588-746, gnl|panTro1|chr20 (54845060-54845220) | |
| 588-746, gnl|rheMac2|chr19 (58281849-58282009) | |
| 588-746, gnl|rn3|chr1 (58459857-58460017) | |
| 588-746, gnl|tetNig1|chrUn_random (90531455-90531295) | |
| 588-746, gnl|xenTro1|scaffold_285 (256808-256968) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 352-528, gnl|bosTau2|chr18 (51562662-51562838) | |
| 352-528, gnl|canFam2|chr1 (107861828-107861615) | |
| 352-528, gnl|danRer3|chr5 (64313542-64313725) | |
| 352-528, gnl|dasNov1|scaffold_31326 (3691-3472) | |
| 352-528, gnl|echTel1|scaffold_227777 (1362-1533) | |
| 352-528, gnl|fr1|chrUn (167222241-167222446) | |
| 352-528, gnl|galGal2|chrUn (111280883-111281097) | |
| 352-528, gnl|hg17|chr19 (57414748-57414971) | |
| 352-528, gnl|Hg17|chr19 (57414754-57414930) | |
| 352-528, gnl|loxAfr1|scaffold_36421 (20849-21035) | |
| 352-528, gnl|mm7|chr17 (19136782-19136999) | |
| 352-528, gnl|Mm7|chr17 (19136786-19136963) | |
| 352-528, gnl|monDom2|scaffold_212 (661764-661546) | |
| 352-528, gnl|oryCun1|scaffold_211749 (71214-71023) | |
| 352-528, gnl|panTro1|chr20 (54843767-54843990) | |
| 352-528, gnl|rheMac2|chr19 (58280558-58280781) | |
| 352-528, gnl|rn3|chr1 (58458742-58458955) | |
| 352-528, gnl|tetNig1|chrUn_random (90532509-90532316) | |
| 352-528, gnl|xenTro1|scaffold_285 (254278-254467) | |
| 588-746, gnl|bosTau2|chr18 (51563839-51563997) | |
| 588-746, gnl|canFam2|chr1 (107860683-107860523) | |
| 588-746, gnl|danRer3|chr5 (64314181-64314341) | |
| 588-746, gnl|dasNov1|scaffold_1033 (62283-62123) | |
| 588-746, gnl|echTel1|scaffold_227777 (1595-1750) | |
| 588-746, gnl|fr1|chrUn (167223418-167223578) | |
| 588-746, gnl|hg17|chr19 (57416044-57416204) | |
| 588-746, gnl|Hg17|chr19 (57416043-57416201) | |
| 588-746, gnl|loxAfr1|scaffold_218282 (202-42) | |
| 588-746, gnl|mm7|chr17 (19137908-19138068) | |
| 588-746, gnl|Mm7|chr17 (19137907-19138065) | |
| 588-746, gnl|monDom2|scaffold_212 (659050-658890) | |
| 588-746, gnl|oryCun1|scaffold_185673 (6946-7108) | |
| 588-746, gnl|panTro1|chr20 (54845060-54845220) | |
| 588-746, gnl|rheMac2|chr19 (58281849-58282009) | |
| 588-746, gnl|rn3|chr1 (58459857-58460017) | |
| 588-746, gnl|tetNig1|chrUn_random (90531455-90531295) | |
| 588-746, gnl|xenTro1|scaffold_285 (256808-256968) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| mga (0.160205) |