Ss1.1-Lng1-LNG010082D11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACGCCAGCTGCAAGAAGCGGCGGACGCCTGAGGTGAGAGAGTCCGGCGAGGATGGAGCC GTCGAAAGTGGAAAAGTTCAGCACCGCCGACAGGGGGAACGGGCTGCGCGCGTTGGCGCG GCTGCGCCCGGGAGAGCTGCTCTTCCGCTCGGATCCTCTGGCGTACACGGTGTGCAAGGG GAGTCGTGGTGTCGTCTGCGACCGCTGCCTCCTCGGGAAGGAGAAGCTGATGCGATGTTC TCAATGCCGAGTTGCCAAATACTGTAGTGCCAAGTGTCAGAAAAAAGCTTGGCAGGACCA CAAGCGAGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCCGACTCTGTCCG ACTTCTTGGCAGAGTTATTTTCAAACTTATGGAAGAAACGCCTTCTGAATCGGAGAAACT TTACTCATTTTATGATCTGGAATCAAATATGAACAAACTGACAGAAGAGAAGAAGGAGGG CCTCAGGCAGCTTGTATTGACATTTCAGCATTTCATGAGAGAGGAAATACAGGATGCTTC TCAGCTGCCACCGTCTTTTGACATTTTTGAAGCCTTCCCGCAATTAGAGTCTCCAACTCT AGAAGAGGGGATTGAGGCAGAATACTAAGTCAGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACGCCAGCTGCAAGAAGCGGCGGACGCCTGAGGTGAGAGAGTCCGGCGAGGATGGAGCC GTCGAAAGTGGAAAAGTTCAGCACCGCCGACAGGGGGAACGGGCTGCGCGCGTTGGCGCG GCTGCGCCCGGGAGAGCTGCTCTTCCGCTCGGATCCTCTGGCGTACACGGTGTGCAAGGG GAGTCGTGGTGTCGTCTGCGACCGCTGCCTCCTCGGGAAGGAGAAGCTGATGCGATGTTC TCAATGCCGAGTTGCCAAATACTGTAGTGCCAAGTGTCAGAAAAAAGCTTGGCAGGACCA CAAGCGAGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCCGACTCTGTCCG ACTTCTTGGCAGAGTTATTTTCAAACTTATGGAAGAAACGCCTTCTGAATCGGAGAAACT TTACTCATTTTATGATCTGGAATCAAATATGAACAAACTGACAGAAGAGAAGAAGGAGGG CCTCAGGCAGCTTGTATTGACATTTCAGCATTTCATGAGAGAGGAAATACAGGATGCTTC TCAGCTGCCACCGTCTTTTGACATTTTTGAAGCCTTCCCGCAATTAGAGTCTCCAACTCT AGAAGAGGGGATTGAGGCAGAATACTAAGTCAGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-217, gnl|bosTau2|chr16 (19358265-19358480) | |
| 1-217, gnl|canFam2|chr7 (40220433-40220739) | |
| 1-217, gnl|echTel1|scaffold_324843 (2122-2426) | |
| 1-217, gnl|hg17|chr1 (242996368-242996678) | |
| 1-217, gnl|Hg17|chr1 (242996613-242996396) | |
| 1-217, gnl|loxAfr1|scaffold_41579 (36660-36362) | |
| 1-217, gnl|mm7|chr1 (179497846-179498136) | |
| 1-217, gnl|Mm7|chr1 (179498077-179497862) | |
| 1-217, gnl|monDom2|scaffold_13 (36571978-36571661) | |
| 1-217, gnl|oryCun1|scaffold_109442 (4865-4556) | |
| 1-217, gnl|panTro1|chr1 (227069778-227070088) | |
| 1-217, gnl|rheMac2|chr1 (210525438-210525128) | |
| 1-217, gnl|rn3|chr13 (95404542-95404832) | |
| 278-391, gnl|bosTau2|chr16 (21152519-21152406) | |
| 278-391, gnl|canFam2|chr7 (40037867-40037999) | |
| 278-391, gnl|dasNov1|scaffold_22491 (19175-19307) | |
| 278-391, gnl|echTel1|scaffold_319225 (43560-43686) | |
| 278-391, gnl|galGal2|chr3 (30275406-30275275) | |
| 278-391, gnl|hg17|chr1 (242824688-242824820) | |
| 278-391, gnl|Hg17|chr1 (242824820-242824707) | |
| 278-391, gnl|mm7|chr1 (179391733-179391863) | |
| 278-391, gnl|Mm7|chr1 (179391863-179391750) | |
| 278-391, gnl|panTro1|chr1 (226903188-226903320) | |
| 278-391, gnl|rheMac2|chr1 (210698288-210698156) | |
| 278-391, gnl|rn3|chr6 (109839548-109839434) | |
| 422-576, gnl|bosTau2|chr16 (21149122-21148970) | |
| 422-576, gnl|canFam2|chr7 (40034431-40034842) | |
| 422-576, gnl|dasNov1|scaffold_22491 (15865-16279) | |
| 422-576, gnl|echTel1|scaffold_319225 (38830-39238) | |
| 422-576, gnl|galGal2|chr3 (30281580-30281146) | |
| 422-576, gnl|hg17|chr1 (242816541-242816950) | |
| 422-576, gnl|Hg17|chr1 (242816703-242816551) | |
| 422-576, gnl|loxAfr1|scaffold_343 (724-309) | |
| 422-576, gnl|mm7|chr1 (179385355-179385747) | |
| 422-576, gnl|Mm7|chr1 (179385516-179385365) | |
| 422-576, gnl|monDom2|scaffold_13 (36785253-36784823) | |
| 422-576, gnl|oryCun1|scaffold_75279 (4-412) | |
| 422-576, gnl|rheMac2|chr1 (210706753-210706344) | |
| 422-576, gnl|rn3|chr13 (95297586-95297973) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-217, gnl|bosTau2|chr16 (19358265-19358480) | |
| 1-217, gnl|canFam2|chr7 (40220433-40220739) | |
| 1-217, gnl|echTel1|scaffold_324843 (2122-2426) | |
| 1-217, gnl|hg17|chr1 (242996368-242996678) | |
| 1-217, gnl|Hg17|chr1 (242996613-242996396) | |
| 1-217, gnl|loxAfr1|scaffold_41579 (36660-36362) | |
| 1-217, gnl|mm7|chr1 (179497846-179498136) | |
| 1-217, gnl|Mm7|chr1 (179498077-179497862) | |
| 1-217, gnl|monDom2|scaffold_13 (36571978-36571661) | |
| 1-217, gnl|oryCun1|scaffold_109442 (4865-4556) | |
| 1-217, gnl|panTro1|chr1 (227069778-227070088) | |
| 1-217, gnl|rheMac2|chr1 (210525438-210525128) | |
| 1-217, gnl|rn3|chr13 (95404542-95404832) | |
| 278-391, gnl|bosTau2|chr16 (21152519-21152406) | |
| 278-391, gnl|canFam2|chr7 (40037867-40037999) | |
| 278-391, gnl|dasNov1|scaffold_22491 (19175-19307) | |
| 278-391, gnl|echTel1|scaffold_319225 (43560-43686) | |
| 278-391, gnl|galGal2|chr3 (30275406-30275275) | |
| 278-391, gnl|hg17|chr1 (242824688-242824820) | |
| 278-391, gnl|Hg17|chr1 (242824820-242824707) | |
| 278-391, gnl|mm7|chr1 (179391733-179391863) | |
| 278-391, gnl|Mm7|chr1 (179391863-179391750) | |
| 278-391, gnl|panTro1|chr1 (226903188-226903320) | |
| 278-391, gnl|rheMac2|chr1 (210698288-210698156) | |
| 278-391, gnl|rn3|chr6 (109839548-109839434) | |
| 422-576, gnl|bosTau2|chr16 (21149122-21148970) | |
| 422-576, gnl|canFam2|chr7 (40034431-40034842) | |
| 422-576, gnl|dasNov1|scaffold_22491 (15865-16279) | |
| 422-576, gnl|echTel1|scaffold_319225 (38830-39238) | |
| 422-576, gnl|galGal2|chr3 (30281580-30281146) | |
| 422-576, gnl|hg17|chr1 (242816541-242816950) | |
| 422-576, gnl|Hg17|chr1 (242816703-242816551) | |
| 422-576, gnl|loxAfr1|scaffold_343 (724-309) | |
| 422-576, gnl|mm7|chr1 (179385355-179385747) | |
| 422-576, gnl|Mm7|chr1 (179385516-179385365) | |
| 422-576, gnl|monDom2|scaffold_13 (36785253-36784823) | |
| 422-576, gnl|oryCun1|scaffold_75279 (4-412) | |
| 422-576, gnl|rheMac2|chr1 (210706753-210706344) | |
| 422-576, gnl|rn3|chr13 (95297586-95297973) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |