Ss1.1-Lng1-LNG010083A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCAGCAGCTGTAAGATAGTAAACAAAGAATTGCTTTGCACCAAGCCAGAACAGACACA TTGAAGGAATTATCTGAAAAGAATAATACATAGGAATGATTGTGAACAGCCTCTCCCTGT GCTACCACAACAAACTCATCTTAGCCCCTATGGTTCGGGTAGGGACTCTCCCAATGCGGC TGCTGGCCCTGGACTATGGAGCAGACATTGTATACTGTGAGGAGCTGATAGATCTCAAGA TGCTTCAGTGCAAGAGAGTTGTCAATGAGGCGCTCAGCACAGTGGACTTTGTCGCTCCTG ATGACCGAGTGGTCTTCCGCACCTGCGAAAGGGAGCAGAGCAGGGTTGTCTTCCAGATGG GGACTTCAGATGCAGAGCGAGCCCTTGCCGTGGCCAAGCTTGTAGAAAATGATGTGGCTG GTATTGACGTCAACATGGGCTGTCCAAAAGAATATTCCACCAAGGGAGGAATGGGAGCTG CCCTGCTATCAGATCCTGATAAGATTGAGAAGGTAAGTCCTGCATGAGTGAAAGCAGAGA GCCTTAAACATGCATATGAACTGGAGTTGCCTGGAACGCTGGAAGATACCCTGAGCCTTG TGAAGCGGATAGAGAGGACTGGCATTGCTGCCATTGCAGTTCATGGGAGGAAGCGGGAGG AGCGACCTCAGCACCCTGTCAGCTGTGAAGCCATCAAAGCCATCGCAGAAACCCTCTCTA TTCCTGTCATAGCCAATGGAGGATCTCACGACCACATCCAAAAGTATTTGGATATAGAGG ACTTTCGACAAGCCACGGCAGCTTCTTCAGTGATGGTGGCCCGAGCAGCCATGTGGAACC CGTCTGTCTTCCTCAAGGAGGGTCCACGACCCTTGGAGGAGGTCATGCAGAAGTACATCA GATACGCGGTGCAGTATGACAACCACCACACCAACACCAAGTACTGCCTGTGCCAGATGC TACGTGAACAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCAGCAGCTGTAAGATAGTAAACAAAGAATTGCTTTGCACCAAGCCAGAACAGACACA TTGAAGGAATTATCTGAAAAGAATAATACATAGGAATGATTGTGAACAGCCTCTCCCTGT GCTACCACAACAAACTCATCTTAGCCCCTATGGTTCGGGTAGGGACTCTCCCAATGCGGC TGCTGGCCCTGGACTATGGAGCAGACATTGTATACTGTGAGGAGCTGATAGATCTCAAGA TGCTTCAGTGCAAGAGAGTTGTCAATGAGGCGCTCAGCACAGTGGACTTTGTCGCTCCTG ATGACCGAGTGGTCTTCCGCACCTGCGAAAGGGAGCAGAGCAGGGTTGTCTTCCAGATGG GGACTTCAGATGCAGAGCGAGCCCTTGCCGTGGCCAAGCTTGTAGAAAATGATGTGGCTG GTATTGACGTCAACATGGGCTGTCCAAAAGAATATTCCACCAAGGGAGGAATGGGAGCTG CCCTGCTATCAGATCCTGATAAGATTGAGAAGGTAAGTCCTGCATGAGTGAAAGCAGAGA GCCTTAAACATGCATATGAACTGGAGTTGCCTGGAACGCTGGAAGATACCCTGAGCCTTG TGAAGCGGATAGAGAGGACTGGCATTGCTGCCATTGCAGTTCATGGGAGGAAGCGGGAGG AGCGACCTCAGCACCCTGTCAGCTGTGAAGCCATCAAAGCCATCGCAGAAACCCTCTCTA TTCCTGTCATAGCCAATGGAGGATCTCACGACCACATCCAAAAGTATTTGGATATAGAGG ACTTTCGACAAGCCACGGCAGCTTCTTCAGTGATGGTGGCCCGAGCAGCCATGTGGAACC CGTCTGTCTTCCTCAAGGAGGGTCCACGACCCTTGGAGGAGGTCATGCAGAAGTACATCA GATACGCGGTGCAGTATGACAACCACCACACCAACACCAAGTACTGCCTGTGCCAGATGC TACGTGAACAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 92-222, gnl|bosTau2|chr18 (14873807-14873677) | |
| 92-222, gnl|Hg17|chr16 (66629424-66629554) | |
| 92-222, gnl|Mm7|chr8 (104614691-104614821) | |
| 734-904, gnl|bosTau2|chr18 (14852849-14852679) | |
| 734-904, gnl|canFam2|chr5 (84454640-84454424) | |
| 734-904, gnl|danRer3|chrUn (81035234-81035442) | |
| 734-904, gnl|dasNov1|scaffold_43559 (40900-40685) | |
| 734-904, gnl|echTel1|scaffold_215855 (1057-1263) | |
| 734-904, gnl|fr1|chrUn (304529981-304530174) | |
| 734-904, gnl|hg17|chr16 (66662329-66662544) | |
| 734-904, gnl|Hg17|chr16 (66662341-66662511) | |
| 734-904, gnl|loxAfr1|scaffold_67478 (7706-7505) | |
| 734-904, gnl|mm7|chr8 (104644743-104644945) | |
| 734-904, gnl|Mm7|chr8 (104644753-104644923) | |
| 734-904, gnl|monDom2|scaffold_23 (17996322-17996107) | |
| 734-904, gnl|oryCun1|scaffold_174869 (43812-43598) | |
| 734-904, gnl|panTro1|chr18 (60968686-60968901) | |
| 734-904, gnl|rheMac2|chr20 (66402353-66402568) | |
| 734-904, gnl|rn3|chr19 (35899237-35899437) | |
| 734-904, gnl|tetNig1|chrUn_random (26181610-26181801) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 92-222, gnl|bosTau2|chr18 (14873807-14873677) | |
| 92-222, gnl|Hg17|chr16 (66629424-66629554) | |
| 92-222, gnl|Mm7|chr8 (104614691-104614821) | |
| 734-904, gnl|bosTau2|chr18 (14852849-14852679) | |
| 734-904, gnl|canFam2|chr5 (84454640-84454424) | |
| 734-904, gnl|danRer3|chrUn (81035234-81035442) | |
| 734-904, gnl|dasNov1|scaffold_43559 (40900-40685) | |
| 734-904, gnl|echTel1|scaffold_215855 (1057-1263) | |
| 734-904, gnl|fr1|chrUn (304529981-304530174) | |
| 734-904, gnl|hg17|chr16 (66662329-66662544) | |
| 734-904, gnl|Hg17|chr16 (66662341-66662511) | |
| 734-904, gnl|loxAfr1|scaffold_67478 (7706-7505) | |
| 734-904, gnl|mm7|chr8 (104644743-104644945) | |
| 734-904, gnl|Mm7|chr8 (104644753-104644923) | |
| 734-904, gnl|monDom2|scaffold_23 (17996322-17996107) | |
| 734-904, gnl|oryCun1|scaffold_174869 (43812-43598) | |
| 734-904, gnl|panTro1|chr18 (60968686-60968901) | |
| 734-904, gnl|rheMac2|chr20 (66402353-66402568) | |
| 734-904, gnl|rn3|chr19 (35899237-35899437) | |
| 734-904, gnl|tetNig1|chrUn_random (26181610-26181801) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |