Ss1.1-Lng1-LNG010088G08.5
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TTGGTGTATAAGTGGGTATGCCATCACTTCGTTCCTTTCCATTTAAGACTGAACTAAAAT
CTCCCCTAGGAATTTATTTTATTTTACTTTATTTTTTTGGAGGAATCTTTCTCCCTGTCT
CCCCAACCCCAGCATCAAAAGAAAGGAAGAAAGAAAGAAACAACAGCTTAAACAACAAAA
AAAGTAACTCTAATCTGTAAAATAGTACGGTTGGATTGCTGAGAATCTATATAAAGAGTT
AGGAAATATAGGTTAATAATTTTTGGAACAAATTTTAAATGTAGGCATTACTAGAGGAAA
AATATCTATGGACTGTTCTCTTCATGAAGAATGTCTGTCTTACCTCCGTTTGTTATGGGA
GGAGGAGAAAATAGTAGAAGAATCTAAGAAGGAACAAGTGATTTTACTTTTTTAGCTCCC
AGCTCCTGTTGTGCTCATTTTAATTGCTGTTTTGAAGATCTGCTGCTCTGTTACCCCCAT
CCCTCAGCCGAAGAGGTGGAGTAGTACTTCCTTTCAGTTTTTGGTGATGTTGAATTCTAC
TTTTGTATTCCCTCCTGGGGCCAGGGGTTAGAATTCCCAAGCGTGACCACAGCTTCTTTT
AAACATCCAAGCTTCCCAGTGGGAAAGAAACTCCAGCTTGACAGGTAAAGGGAGTGGGTG
GGGTTGCTGCCTGCAATTTCTCTAAAGCCGCTTTAGTGCCTTCGCACACACACCCAGATG
TCCTAAGCAGGGGGAAGGCGTGTGTGTGTGCTCGTAGTCCAGTCGCTCCACAGACAGGAG
GACGCTTGCCCGGTATGGAAATTGGAGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTA
CATGTAAAGGAAACAAACCAACAGAAGTTGAGGAAGCTACGTGTGCTTTTTTTGGTCTCG
ATGCCGTAGGACACTGAGAGCCTTCCCCAGGCCGTCGCCCTCCGGTACCATGCGTTGCCT
TCTCTGGTGACAACTACAGTGATTTGGAAAGTCTCTCTCTCGGGCCAGTAGGAAAAGGTT
CCTGTTTTTCTGCTCCTGACCTCCTTCGTGTCTTCTCTTTCCCATCAACCCCCTCTGTCT
TGTCAAGTTGCTGGAAGCTTTGCTTTATTGGTTGGCAGTGACCTAAGAGCAGGATTCAGT
GAGGATGCCGTGGAAGAGAAGAACTTTGCTTTCCTCGGTTTTCCCGGGCAAGAGCCGTGT
CTGCTGGGGTCAGGGGGCTTCAGGGCATGGAGAAAATTCGCTGGGAGCCTCATCTCCCCC
GCCACGTTCTGGCATGCGTGCAGGGACTTGTGACGTAGATTTACTTGGGAGTATTTTGGT
CCTGTTGACTTGGGCTTTCCGGTTTTTACCAGTTTCCTGGGTTTTTTTAAACACTTGATT
CCTAGCGGCTAGAGGTCCCCATCTCTCAAACGTCACAGCTTGGTCTCTGTCTACCGCATG
AGTAGCTGAAAGGAGGAATGTCTTCCGCCAGACCCGGGGACCTCTACTGGCAATTTGGAT
CCGGCGCCATGACCCAATTTTAGGTGTTTAAAAAGAAAAAGTACAGATCCCCAAGACACT
GTGAAAAAACGGATGGCCCTTATGGCACCTCTGATCCCTCAGTCCCTAGCTCTTGATATT
TTTCATTTGCAGCGGCCCAGAAGTTAACTTAGCGGTGCTGCAAGTTAGGGTTCCAAACCA
GCTCCTTTCGTCAGTGTCCCCTCAGTAAATCAGCATTATGCATTGATTGCCATTCAGTCC
ATTTTATTTATAGCAGCTTGATTTTCTATTACTATGGCTCCTGTTCTGAGAACTTTCCCA
CTTCTTCTGACATGAATGTGGCATAAATTAGCAATTGGTTCTTCCAGGTTCCTGTGGGTT
GATTGTGGTGTGTAAGATATGCAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTGGTGTATAAGTGGGTATGCCATCACTTCGTTCCTTTCCATTTAAGACTGAACTAAAAT
CTCCCCTAGGAATTTATTTTATTTTACTTTATTTTTTTGGAGGAATCTTTCTCCCTGTCT
CCCCAACCCCAGCATCAAAAGAAAGGAAGAAAGAAAGAAACAACAGCTTAAACAACAAAA
AAAGTAACTCTAATCTGTAAAATAGTACGGTTGGATTGCTGAGAATCTATATAAAGAGTT
AGGAAATATAGGTTAATAATTTTTGGAACAAATTTTAAATGTAGGCATTACTAGAGGAAA
AATATCTATGGACTGTTCTCTTCATGAAGAATGTCTGTCTTACCTCCGTTTGTTATGGGA
GGAGGAGAAAATAGTAGAAGAATCTAAGAAGGAACAAGTGATTTTACTTTTTTAGCTCCC
AGCTCCTGTTGTGCTCATTTTAATTGCTGTTTTGAAGATCTGCTGCTCTGTTACCCCCAT
CCCTCAGCCGAAGAGGTGGAGTAGTACTTCCTTTCAGTTTTTGGTGATGTTGAATTCTAC
TTTTGTATTCCCTCCTGGGGCCAGGGGTTAGAATTCCCAAGCGTGACCACAGCTTCTTTT
AAACATCCAAGCTTCCCAGTGGGAAAGAAACTCCAGCTTGACAGGTAAAGGGAGTGGGTG
GGGTTGCTGCCTGCAATTTCTCTAAAGCCGCTTTAGTGCCTTCGCACACACACCCAGATG
TCCTAAGCAGGGGGAAGGCGTGTGTGTGTGCTCGTAGTCCAGTCGCTCCACAGACAGGAG
GACGCTTGCCCGGTATGGAAATTGGAGTGGTTCTGGACAGGCCCCAAAGGCAGTGGGCTA
CATGTAAAGGAAACAAACCAACAGAAGTTGAGGAAGCTACGTGTGCTTTTTTTGGTCTCG
ATGCCGTAGGACACTGAGAGCCTTCCCCAGGCCGTCGCCCTCCGGTACCATGCGTTGCCT
TCTCTGGTGACAACTACAGTGATTTGGAAAGTCTCTCTCTCGGGCCAGTAGGAAAAGGTT
CCTGTTTTTCTGCTCCTGACCTCCTTCGTGTCTTCTCTTTCCCATCAACCCCCTCTGTCT
TGTCAAGTTGCTGGAAGCTTTGCTTTATTGGTTGGCAGTGACCTAAGAGCAGGATTCAGT
GAGGATGCCGTGGAAGAGAAGAACTTTGCTTTCCTCGGTTTTCCCGGGCAAGAGCCGTGT
CTGCTGGGGTCAGGGGGCTTCAGGGCATGGAGAAAATTCGCTGGGAGCCTCATCTCCCCC
GCCACGTTCTGGCATGCGTGCAGGGACTTGTGACGTAGATTTACTTGGGAGTATTTTGGT
CCTGTTGACTTGGGCTTTCCGGTTTTTACCAGTTTCCTGGGTTTTTTTAAACACTTGATT
CCTAGCGGCTAGAGGTCCCCATCTCTCAAACGTCACAGCTTGGTCTCTGTCTACCGCATG
AGTAGCTGAAAGGAGGAATGTCTTCCGCCAGACCCGGGGACCTCTACTGGCAATTTGGAT
CCGGCGCCATGACCCAATTTTAGGTGTTTAAAAAGAAAAAGTACAGATCCCCAAGACACT
GTGAAAAAACGGATGGCCCTTATGGCACCTCTGATCCCTCAGTCCCTAGCTCTTGATATT
TTTCATTTGCAGCGGCCCAGAAGTTAACTTAGCGGTGCTGCAAGTTAGGGTTCCAAACCA
GCTCCTTTCGTCAGTGTCCCCTCAGTAAATCAGCATTATGCATTGATTGCCATTCAGTCC
ATTTTATTTATAGCAGCTTGATTTTCTATTACTATGGCTCCTGTTCTGAGAACTTTCCCA
CTTCTTCTGACATGAATGTGGCATAAATTAGCAATTGGTTCTTCCAGGTTCCTGTGGGTT
GATTGTGGTGTGTAAGATATGCAA
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282-400, - strand, RNAz p=0.574144 |
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471-570, - strand, RNAz p=0.919182 |
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1110-1226, - strand, RNAz p=0.931464 |
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1124-1239, + strand, RNAz p=0.992818 |
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1332-1458, - strand, RNAz p=0.92393 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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282-400, - strand, RNAz p=0.574144 |
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471-570, - strand, RNAz p=0.919182 |
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1110-1226, - strand, RNAz p=0.931464 |
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1124-1239, + strand, RNAz p=0.992818 |
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1332-1458, - strand, RNAz p=0.92393 |
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4-1458, gnl|bosTau2|chr5 (70163555-70162121) |
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4-1458, gnl|canFam2|chr10 (27914511-27913497) |
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4-1458, gnl|dasNov1|scaffold_2883 (65227-66250) |
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4-1458, gnl|echTel1|scaffold_322212 (56929-57963) |
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4-1458, gnl|galGal2|chr1 (46831478-46830578) |
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4-1458, gnl|hg17|chr22 (39046908-39047923) |
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4-1458, gnl|Hg17|chr22 (39047027-39048471) |
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4-1458, gnl|loxAfr1|scaffold_6441 (17323-18354) |
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4-1458, gnl|mm7|chr15 (81017244-81018255) |
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4-1458, gnl|Mm7|chr15 (81017362-81018732) |
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4-1458, gnl|monDom2|scaffold_133 (715337-714190) |
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4-1458, gnl|oryCun1|scaffold_201474 (76874-77847) |
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4-1458, gnl|panTro1|chr23 (39299569-39300586) |
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4-1458, gnl|rheMac2|chr10 (84264685-84265729) |
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4-1458, gnl|rn3|chr7 (119238536-119239538) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-1458, gnl|bosTau2|chr5 (70163555-70162121) |
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4-1458, gnl|canFam2|chr10 (27914511-27913497) |
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4-1458, gnl|dasNov1|scaffold_2883 (65227-66250) |
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4-1458, gnl|echTel1|scaffold_322212 (56929-57963) |
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4-1458, gnl|galGal2|chr1 (46831478-46830578) |
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4-1458, gnl|hg17|chr22 (39046908-39047923) |
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4-1458, gnl|Hg17|chr22 (39047027-39048471) |
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4-1458, gnl|loxAfr1|scaffold_6441 (17323-18354) |
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4-1458, gnl|mm7|chr15 (81017244-81018255) |
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4-1458, gnl|Mm7|chr15 (81017362-81018732) |
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4-1458, gnl|monDom2|scaffold_133 (715337-714190) |
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4-1458, gnl|oryCun1|scaffold_201474 (76874-77847) |
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4-1458, gnl|panTro1|chr23 (39299569-39300586) |
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4-1458, gnl|rheMac2|chr10 (84264685-84265729) |
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4-1458, gnl|rn3|chr7 (119238536-119239538) |
|
fty (0.17584) |
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pla (0.133672) |
|
fty (0.17584) |
|
pla (0.133672) |
