Ss1.1-Lng1-LNG010089B02.5
|
AAAAGTAGGGGCTCGGAGCTAGCGTCGGGATGGCGGTGGTGTCGCTTCTGTTGTTCGGGG
GTTTGTGGAGTGCTGTGGGATCGTCTAATCTGGGTGTCGTTACATGCGGTTCTGTGGTGA
AACTGCTCAATACGCGCCACAACGTGCGACTGCACTCACACGACGTGCGCTACGGGTCAG
GTAGTGGACAGCAGTCGGTAACAGGTGTAACCTCTGTGGATGACAGCAACAGTTACTGGA
GGATACGGGGGAAGACCGCCACAGTGTGTGAGAGGGGAACCCCCATCAGATGTGGTCAGC
CCATTCGGCTGACACATGTCAATACTGGCCGAAACCTCCATAGTCATCACTTCACCTCAC
CTCTTTCTGGAAACCAGGAGGTGAGTGCTTTTGGTGAGGAAGGTGAAGGTGATTATCTGG
ATGACTGGACAGTGCTCTGTAATGGGCCCTACTGGGTGAGGGATGGCGAGGTGCGGTTCA
AGCATTCTTCCACCGAAGTGCTGCTGTCTGTCACAGGAGAACAATATGGTCGACCCATCA
GTGGGCAAAAAGAGGTACATGGCATGGCCCAGCCAAGCCAAAACAACTACTGGAAAGCCA
TGGAAGGCATCTTCATGAAGCCCAATGAGTTGTTGAAGGCAGAAGCCCACCACTCAGAGC
TCTGAGTCTGGAGGCTCTGAGCCACTGTTACCGCACAGTGTTCATAGACGACTGCTGCTC
CCTCACCCTTTGGATCCCTGCTACAGGTTCCCTGGTCCGTGGCCATGTCACCTCTGAGAT
GAAGATGCATGACAGAAAATAGTGGCTGTGTTTGGAAGCTTCATCCCTTCATACTTGAAT
TGGTTGTTCTCCCAGACTTGGGTCAGTTCTTCCTGAGCACAGGACTTGCCACTAAAGGAT
CAGATGCTTTTTATTCCTATTAATAAAACAGAAATGGGGATACATCCCTCCTACCTGGGA
AATTATTATTCCTCAGAATCTTGGCATTATGAATTATTTAATGTATGTGACTTTTCTCCT
ACTTTCTTTCTCCAAAATTATAAAAGAATTGCATTGTTAGTCACTGTGTTGTCATTTATG
AGGTGTGCTATTTCATAATCTAATTCATCTTTGAGTCCTAAGAGTCATTGCTGTCACCCT
TTTGAGATGCTGGGGACCTTTGGTGTGGGCTCTTTTGAGAGCCTTACTTGCATCCTAACT
TTGTTTCTACTTTCACTCCTCCCTCAGCACCTCATCCTTATTAGACTTTTGACTAATTGT
GGGTAAAGATCCTTAATAAATAGCCAATGAAATGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAGTAGGGGCTCGGAGCTAGCGTCGGGATGGCGGTGGTGTCGCTTCTGTTGTTCGGGG
GTTTGTGGAGTGCTGTGGGATCGTCTAATCTGGGTGTCGTTACATGCGGTTCTGTGGTGA
AACTGCTCAATACGCGCCACAACGTGCGACTGCACTCACACGACGTGCGCTACGGGTCAG
GTAGTGGACAGCAGTCGGTAACAGGTGTAACCTCTGTGGATGACAGCAACAGTTACTGGA
GGATACGGGGGAAGACCGCCACAGTGTGTGAGAGGGGAACCCCCATCAGATGTGGTCAGC
CCATTCGGCTGACACATGTCAATACTGGCCGAAACCTCCATAGTCATCACTTCACCTCAC
CTCTTTCTGGAAACCAGGAGGTGAGTGCTTTTGGTGAGGAAGGTGAAGGTGATTATCTGG
ATGACTGGACAGTGCTCTGTAATGGGCCCTACTGGGTGAGGGATGGCGAGGTGCGGTTCA
AGCATTCTTCCACCGAAGTGCTGCTGTCTGTCACAGGAGAACAATATGGTCGACCCATCA
GTGGGCAAAAAGAGGTACATGGCATGGCCCAGCCAAGCCAAAACAACTACTGGAAAGCCA
TGGAAGGCATCTTCATGAAGCCCAATGAGTTGTTGAAGGCAGAAGCCCACCACTCAGAGC
TCTGAGTCTGGAGGCTCTGAGCCACTGTTACCGCACAGTGTTCATAGACGACTGCTGCTC
CCTCACCCTTTGGATCCCTGCTACAGGTTCCCTGGTCCGTGGCCATGTCACCTCTGAGAT
GAAGATGCATGACAGAAAATAGTGGCTGTGTTTGGAAGCTTCATCCCTTCATACTTGAAT
TGGTTGTTCTCCCAGACTTGGGTCAGTTCTTCCTGAGCACAGGACTTGCCACTAAAGGAT
CAGATGCTTTTTATTCCTATTAATAAAACAGAAATGGGGATACATCCCTCCTACCTGGGA
AATTATTATTCCTCAGAATCTTGGCATTATGAATTATTTAATGTATGTGACTTTTCTCCT
ACTTTCTTTCTCCAAAATTATAAAAGAATTGCATTGTTAGTCACTGTGTTGTCATTTATG
AGGTGTGCTATTTCATAATCTAATTCATCTTTGAGTCCTAAGAGTCATTGCTGTCACCCT
TTTGAGATGCTGGGGACCTTTGGTGTGGGCTCTTTTGAGAGCCTTACTTGCATCCTAACT
TTGTTTCTACTTTCACTCCTCCCTCAGCACCTCATCCTTATTAGACTTTTGACTAATTGT
GGGTAAAGATCCTTAATAAATAGCCAATGAAATGTT
|
|
6-183, gnl|bosTau2|chr19 (13639441-13639264) |
|
6-183, gnl|Hg17|chr17 (24013045-24012868) |
|
6-183, gnl|Mm7|chr11 (78327576-78327748) |
| |
|
355-624, gnl|bosTau2|chr17 (45429746-45430015) |
|
355-624, gnl|Hg17|chr22 (20322714-20322983) |
|
355-624, gnl|Mm7|chr16 (16680542-16680275) |
| |
|
628-1049, gnl|bosTau2|chr16 (23376321-23376736) |
|
628-1049, gnl|Hg17|chr17 (24000171-23999747) |
| |
|
1161-1296, gnl|bosTau2|chr19 (13631775-13631637) |
|
1161-1296, gnl|canFam2|chr9 (46175358-46175237) |
|
1161-1296, gnl|hg17|chr15 (73196452-73196589) |
|
1161-1296, gnl|Hg17|chr17 (23999641-23999492) |
|
1161-1296, gnl|loxAfr1|scaffold_5483 (77025-76891) |
|
1161-1296, gnl|mm7|chr11 (78337689-78337822) |
|
1161-1296, gnl|oryCun1|scaffold_190404 (10591-10692) |
|
1161-1296, gnl|panTro1|chr16_random (22319258-22319395) |
|
1161-1296, gnl|rheMac2|chr7 (53941162-53941296) |
|
1161-1296, gnl|rn3|chr10 (64392119-64391996) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-183, gnl|bosTau2|chr19 (13639441-13639264) |
|
6-183, gnl|Hg17|chr17 (24013045-24012868) |
|
6-183, gnl|Mm7|chr11 (78327576-78327748) |
| |
|
355-624, gnl|bosTau2|chr17 (45429746-45430015) |
|
355-624, gnl|Hg17|chr22 (20322714-20322983) |
|
355-624, gnl|Mm7|chr16 (16680542-16680275) |
| |
|
628-1049, gnl|bosTau2|chr16 (23376321-23376736) |
|
628-1049, gnl|Hg17|chr17 (24000171-23999747) |
| |
|
1161-1296, gnl|bosTau2|chr19 (13631775-13631637) |
|
1161-1296, gnl|canFam2|chr9 (46175358-46175237) |
|
1161-1296, gnl|hg17|chr15 (73196452-73196589) |
|
1161-1296, gnl|Hg17|chr17 (23999641-23999492) |
|
1161-1296, gnl|loxAfr1|scaffold_5483 (77025-76891) |
|
1161-1296, gnl|mm7|chr11 (78337689-78337822) |
|
1161-1296, gnl|oryCun1|scaffold_190404 (10591-10692) |
|
1161-1296, gnl|panTro1|chr16_random (22319258-22319395) |
|
1161-1296, gnl|rheMac2|chr7 (53941162-53941296) |
|
1161-1296, gnl|rn3|chr10 (64392119-64391996) |
|
fcc (0.593354) |
|
ssp (0.406559) |
|
fty (0.351679) |
|
hyp (0.285673) |
|
che (0.272628) |
|
cbe (0.239234) |
|
ebs (0.236602) |
|
ecc (0.23007) |
|
nms (0.213858) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
sin (0.174948) |
|
eye (0.170503) |
|
cki (0.165235) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
cag (0.151194) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
ski (0.146735) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
sug (0.127291) |
|
ese (0.126502) |
|
cly (0.120642) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
nbm (0.0993246) |
|
fcc (0.593354) |
|
ssp (0.406559) |
|
fty (0.351679) |
|
hyp (0.285673) |
|
che (0.272628) |
|
cbe (0.239234) |
|
ebs (0.236602) |
|
ecc (0.23007) |
|
nms (0.213858) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
sin (0.174948) |
|
eye (0.170503) |
|
cki (0.165235) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
cag (0.151194) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
ski (0.146735) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
sug (0.127291) |
|
ese (0.126502) |
|
cly (0.120642) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
nbm (0.0993246) |
