Non-Coding RNA Search

Ss1.1-Lng1-LNG010096B12.5

Sequence:


               
               GGAAGAGAGGATGAGAATGGCAGAAGGAGGGGTTACTAGTGAGGACTATCGCACATTTTT
ACAGCAGCCTTCTGGAAATATGGACGACAGCGGCTTCTTCTCTATACAAGTTATAAGCAA
TGCCTTGAAAGTGTGGGGTTTAGAACTAATCCTCTTTAACAGTCCAGAGTATCAGAGGCT
CAGGATCGATCCCATAAATGAAAGGTCATTTATATGCAATTATAAGGAACACTGGTTTAC
AGTTAGAAAATTAGGAAAACAGTGGTTCAACTTGAATTCTCTCTTAACGGGTCCAGAATT
AATATCAGACACATACCTTGCACTTTTCTTGGCTCAGCTACAACAGGAAGGTTATTCTAT
ATTCGTCGTTAAGGGTGACCTGCCAGACTGTGAAGCGGACAAAACATAGCAGATGATCAG
GGTCCAGCAGATGCAGCGACCAAAACTTATTGGAGAAGAATTAGCACAATTAAAAGAACA
GAGGGTCCAGAAAACCGATCTGGAACGAGTCTTAGAAGCAAATGACGGGTCGGGAATGTT
AGACGAAGATGAGGAGGATTTGCAGCGGGCTCTGGCCCTAAGTCGCCAGGAAATCGACAT
GGAAGATGAAGAGGCAGATCTCCGCAGGGCTATTCAGCTCAGTATGCAAGGTACTTCCAG
AAACATATCTCAAGATATTCCACAGACATCAGGTACACATCTTACTTCAGAAGAGCTGCG
GAAGAGAAGAGAAGCCTACTTTGAAAAGCAGCAGCAGCAGCAGCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGAGAGGATGAGAATGGCAGAAGGAGGGGTTACTAGTGAGGACTATCGCACATTTTT
ACAGCAGCCTTCTGGAAATATGGACGACAGCGGCTTCTTCTCTATACAAGTTATAAGCAA
TGCCTTGAAAGTGTGGGGTTTAGAACTAATCCTCTTTAACAGTCCAGAGTATCAGAGGCT
CAGGATCGATCCCATAAATGAAAGGTCATTTATATGCAATTATAAGGAACACTGGTTTAC
AGTTAGAAAATTAGGAAAACAGTGGTTCAACTTGAATTCTCTCTTAACGGGTCCAGAATT
AATATCAGACACATACCTTGCACTTTTCTTGGCTCAGCTACAACAGGAAGGTTATTCTAT
ATTCGTCGTTAAGGGTGACCTGCCAGACTGTGAAGCGGACAAAACATAGCAGATGATCAG
GGTCCAGCAGATGCAGCGACCAAAACTTATTGGAGAAGAATTAGCACAATTAAAAGAACA
GAGGGTCCAGAAAACCGATCTGGAACGAGTCTTAGAAGCAAATGACGGGTCGGGAATGTT
AGACGAAGATGAGGAGGATTTGCAGCGGGCTCTGGCCCTAAGTCGCCAGGAAATCGACAT
GGAAGATGAAGAGGCAGATCTCCGCAGGGCTATTCAGCTCAGTATGCAAGGTACTTCCAG
AAACATATCTCAAGATATTCCACAGACATCAGGTACACATCTTACTTCAGAAGAGCTGCG
GAAGAGAAGAGAAGCCTACTTTGAAAAGCAGCAGCAGCAGCAGCAGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61835640|ref|XP_601853.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61835640|ref|XP_601853.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-748, gnl|bosTau2|chr10 (2881652-2882399)
               

               
               1-748, gnl|Hg17|chr8 (111636929-111637688)
               

               
               1-748, gnl|Mm7|chr12 (99443690-99428319)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-748, gnl|bosTau2|chr10 (2881652-2882399)
               

               
               1-748, gnl|Hg17|chr8 (111636929-111637688)
               

               
               1-748, gnl|Mm7|chr12 (99443690-99428319)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sag (0.182715)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	1-748, gnl\|bosTau2\|chr10 (2881652-2882399)
	1-748, gnl\|Hg17\|chr8 (111636929-111637688)
	1-748, gnl\|Mm7\|chr12 (99443690-99428319)