Ss1.1-Lng1-LNG010097D05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTAGGAGCTGTCCCCGGTTCTCCGCTCCTCTCTGAAGTGGACCCTTCCTGTGTTCCCTG GACTCTGTTTTTCTGTCCCCTGTGGCCCCAGCCCCGACCTAGGCTCCGGCCCAGGCGGGC CACTCCAGAGCCGCCATGTCGTCTGACTTCGAAGGCTACGAGCAAGACTTCGCGGTACTC ACTGCTGAGATCACCAACAAGATTGCAAGGGTACCCCGACTCCCGCCTGATGAGAAGAAG CAGATGGTTGCGAATGTGGAGAAACAGCTTGAAGAAGCAAAAGAACTGTTGGAACAGATG GACCTGGAAGTCCGAGAGATTCCACCCCAAAGTCGAGGAATGTACAGCAACAGAATGAGA AGCTACAAGCAAGAAATGGGAAAACTTGAGACAGATTTTAAAAGGTCACGGATCGCCTAC AGTGACGAAGTACGGAATGAGCTCCTAGGGGATGATGGGAATTCCTCAGAGAACCAGAGG GCACATCTGCTCGATAACACAGAGAGGCTGGAAAGGTCATCTCGGAGACTAGAGGCTGGA TACCAAATAGCAGTGGAAACCGAGCAAATTGGCCAGGAGATGTTGGAAAACCTCAGTCAT GACAGAGAAAAGATACAGAGAGCACGCGAAAGGCTTCGGGAAACAGATGCTAACTTGGGG AAAAGCTCCAGGGTTCTGACAGGGATGTTGCGAAGAATCATCCAGAACCGCATCCTGGTC GTCATCCTTGCCATCATCCTGGTCATCACCATCCTGACGGCCATCACTTTTTCTGTCAGA AGACACTGATGTATCTGCTCCTCCCTGATCAACAGCAACAACTGCCCGTTCTGAGTAATT AAGACAAAATGGTCACATGAATCATTCTGTGGCGCTGACAGGCCCCGGGTCACCCTCCCC CCTCACTCACCACTGTTCAGCCAAAGCGCAAAGAGTGTAAAAATATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTAGGAGCTGTCCCCGGTTCTCCGCTCCTCTCTGAAGTGGACCCTTCCTGTGTTCCCTG GACTCTGTTTTTCTGTCCCCTGTGGCCCCAGCCCCGACCTAGGCTCCGGCCCAGGCGGGC CACTCCAGAGCCGCCATGTCGTCTGACTTCGAAGGCTACGAGCAAGACTTCGCGGTACTC ACTGCTGAGATCACCAACAAGATTGCAAGGGTACCCCGACTCCCGCCTGATGAGAAGAAG CAGATGGTTGCGAATGTGGAGAAACAGCTTGAAGAAGCAAAAGAACTGTTGGAACAGATG GACCTGGAAGTCCGAGAGATTCCACCCCAAAGTCGAGGAATGTACAGCAACAGAATGAGA AGCTACAAGCAAGAAATGGGAAAACTTGAGACAGATTTTAAAAGGTCACGGATCGCCTAC AGTGACGAAGTACGGAATGAGCTCCTAGGGGATGATGGGAATTCCTCAGAGAACCAGAGG GCACATCTGCTCGATAACACAGAGAGGCTGGAAAGGTCATCTCGGAGACTAGAGGCTGGA TACCAAATAGCAGTGGAAACCGAGCAAATTGGCCAGGAGATGTTGGAAAACCTCAGTCAT GACAGAGAAAAGATACAGAGAGCACGCGAAAGGCTTCGGGAAACAGATGCTAACTTGGGG AAAAGCTCCAGGGTTCTGACAGGGATGTTGCGAAGAATCATCCAGAACCGCATCCTGGTC GTCATCCTTGCCATCATCCTGGTCATCACCATCCTGACGGCCATCACTTTTTCTGTCAGA AGACACTGATGTATCTGCTCCTCCCTGATCAACAGCAACAACTGCCCGTTCTGAGTAATT AAGACAAAATGGTCACATGAATCATTCTGTGGCGCTGACAGGCCCCGGGTCACCCTCCCC CCTCACTCACCACTGTTCAGCCAAAGCGCAAAGAGTGTAAAAATATTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 2-234, gnl|bosTau2|chr26 (21367650-21367881) | |
| 2-234, gnl|Hg17|chr10 (114196985-114197220) | |
| 2-234, gnl|Mm7|chr19 (55230552-55230783) | |
| 290-398, gnl|bosTau2|chr26 (21382971-21383079) | |
| 290-398, gnl|canFam2|chr28 (26514039-26514161) | |
| 290-398, gnl|danRer3|chr12 (29153843-29153721) | |
| 290-398, gnl|dasNov1|scaffold_88468 (7095-7217) | |
| 290-398, gnl|echTel1|scaffold_319465 (94281-94158) | |
| 290-398, gnl|fr1|chrUn (62918844-62918966) | |
| 290-398, gnl|galGal2|chr6 (25806989-25807111) | |
| 290-398, gnl|hg17|chr10 (114214291-114214413) | |
| 290-398, gnl|Hg17|chr10 (114214297-114214405) | |
| 290-398, gnl|loxAfr1|scaffold_4278 (101015-101137) | |
| 290-398, gnl|mm7|chr19 (55242575-55242697) | |
| 290-398, gnl|Mm7|chr19 (55242581-55242689) | |
| 290-398, gnl|monDom2|scaffold_14 (50043137-50043015) | |
| 290-398, gnl|oryCun1|scaffold_192254 (260-138) | |
| 290-398, gnl|panTro1|chr8 (116141891-116142013) | |
| 290-398, gnl|rheMac2|chr9 (112125688-112125810) | |
| 290-398, gnl|tetNig1|chrUn_random (87579034-87578912) | |
| 694-948, gnl|bosTau2|chr26 (21736284-21736539) | |
| 694-948, gnl|Hg17|chr10 (114565037-114565290) | |
| 694-948, gnl|Mm7|chr19 (55538791-55539046) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-234, gnl|bosTau2|chr26 (21367650-21367881) | |
| 2-234, gnl|Hg17|chr10 (114196985-114197220) | |
| 2-234, gnl|Mm7|chr19 (55230552-55230783) | |
| 290-398, gnl|bosTau2|chr26 (21382971-21383079) | |
| 290-398, gnl|canFam2|chr28 (26514039-26514161) | |
| 290-398, gnl|danRer3|chr12 (29153843-29153721) | |
| 290-398, gnl|dasNov1|scaffold_88468 (7095-7217) | |
| 290-398, gnl|echTel1|scaffold_319465 (94281-94158) | |
| 290-398, gnl|fr1|chrUn (62918844-62918966) | |
| 290-398, gnl|galGal2|chr6 (25806989-25807111) | |
| 290-398, gnl|hg17|chr10 (114214291-114214413) | |
| 290-398, gnl|Hg17|chr10 (114214297-114214405) | |
| 290-398, gnl|loxAfr1|scaffold_4278 (101015-101137) | |
| 290-398, gnl|mm7|chr19 (55242575-55242697) | |
| 290-398, gnl|Mm7|chr19 (55242581-55242689) | |
| 290-398, gnl|monDom2|scaffold_14 (50043137-50043015) | |
| 290-398, gnl|oryCun1|scaffold_192254 (260-138) | |
| 290-398, gnl|panTro1|chr8 (116141891-116142013) | |
| 290-398, gnl|rheMac2|chr9 (112125688-112125810) | |
| 290-398, gnl|tetNig1|chrUn_random (87579034-87578912) | |
| 694-948, gnl|bosTau2|chr26 (21736284-21736539) | |
| 694-948, gnl|Hg17|chr10 (114565037-114565290) | |
| 694-948, gnl|Mm7|chr19 (55538791-55539046) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| cty (0.20816) | |
| fty (0.17584) | |
| mga (0.160205) | |
| cag (0.151194) | |
| lin (0.145603) | |
| spl (0.143184) | |
| nmm (0.132802) | |
| cly (0.120642) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| fty (0.17584) | |
| mga (0.160205) | |
| cag (0.151194) | |
| lin (0.145603) | |
| spl (0.143184) | |
| nmm (0.132802) | |
| cly (0.120642) |