Ss1.1-Lng1-LNG010098B04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTAACTTCAATCGGTTGTTTGAAGGACGTTCATCAAGGAAACCAGAGAAGCTTAAAACT CTCTTCTGCTACTTTAGAAGAGTCACAGAGAAAAAACCTACTGGGTTGGTGACATTTACA AGACAGAGTCTTGAAGATTTTCCAGAGTGGGAAAGGTGTGAAAAACCTCTGACTCGGTTG CATGTCACTTATGAAGGTACCATAGAAGGAAATGGTCAAGGCATGCTACAGGTGGATTTT GCAAACCGTTTTGTTGGAGGTGGTGTAACCAGTGCAGGACTTGTGCAAGAAGAAATCCGC TTTTTAATCAACCCTGAGTTGATTGTTTCACGACTCTTCACTGAGGTGCTGGATCACAAT GAATGTCTTATCATCACAGGTACTGAACAGTACAGCGAATACACAGGCTATGCTGAAACA TATCGTTGGGCCCGGAGCCATGAAGATAGGAGTGAAAGGGACGATTGGCAGCGACGAGGC ACTGAAATTGTTGCCATTGACGCCCTTCACTTCAGACGCTACCTCGACCAGTTCGTGCCT GAGAAAATCAGACGCGAGCTTAACAAGGCTTACTGTGGATTTCTTCGTCCTGGAGTTTCT TCAGAGAATCTTTCTGCAGTGGCAACTGGAAACTGGGGCTGTGGTGCCTTTGGGGGCGAT GCCAGATTAAAAGCCTTAATACAGATACTGGCAGCTGCTGCAGCTGAGCGAGATGTGGTT TATTTCACCTTTGGGGACTCAGAATTGATGAGAGACATTTACAGCATGCACACTTTCCTT ACTGAAAGGAAACTGACCGTTGGGAGAGTGTATAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTAACTTCAATCGGTTGTTTGAAGGACGTTCATCAAGGAAACCAGAGAAGCTTAAAACT CTCTTCTGCTACTTTAGAAGAGTCACAGAGAAAAAACCTACTGGGTTGGTGACATTTACA AGACAGAGTCTTGAAGATTTTCCAGAGTGGGAAAGGTGTGAAAAACCTCTGACTCGGTTG CATGTCACTTATGAAGGTACCATAGAAGGAAATGGTCAAGGCATGCTACAGGTGGATTTT GCAAACCGTTTTGTTGGAGGTGGTGTAACCAGTGCAGGACTTGTGCAAGAAGAAATCCGC TTTTTAATCAACCCTGAGTTGATTGTTTCACGACTCTTCACTGAGGTGCTGGATCACAAT GAATGTCTTATCATCACAGGTACTGAACAGTACAGCGAATACACAGGCTATGCTGAAACA TATCGTTGGGCCCGGAGCCATGAAGATAGGAGTGAAAGGGACGATTGGCAGCGACGAGGC ACTGAAATTGTTGCCATTGACGCCCTTCACTTCAGACGCTACCTCGACCAGTTCGTGCCT GAGAAAATCAGACGCGAGCTTAACAAGGCTTACTGTGGATTTCTTCGTCCTGGAGTTTCT TCAGAGAATCTTTCTGCAGTGGCAACTGGAAACTGGGGCTGTGGTGCCTTTGGGGGCGAT GCCAGATTAAAAGCCTTAATACAGATACTGGCAGCTGCTGCAGCTGAGCGAGATGTGGTT TATTTCACCTTTGGGGACTCAGAATTGATGAGAGACATTTACAGCATGCACACTTTCCTT ACTGAAAGGAAACTGACCGTTGGGAGAGTGTATAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 230-381, gnl|bosTau2|chr28 (34142097-34141946) | |
| 230-381, gnl|Hg17|chr10 (50735507-50735356) | |
| 230-381, gnl|Mm7|chr14 (29692329-29692480) | |
| 457-569, gnl|bosTau2|chr28 (34130517-34130405) | |
| 457-569, gnl|canFam2|chr28 (4675521-4675625) | |
| 457-569, gnl|danRer3|chr13 (30107089-30106987) | |
| 457-569, gnl|dasNov1|scaffold_1996 (49875-49771) | |
| 457-569, gnl|echTel1|scaffold_320600 (4581-4685) | |
| 457-569, gnl|fr1|chrUn (90524581-90524689) | |
| 457-569, gnl|galGal2|chr6 (2297505-2297405) | |
| 457-569, gnl|hg17|chr10 (50719990-50720094) | |
| 457-569, gnl|Hg17|chr10 (50720112-50720000) | |
| 457-569, gnl|loxAfr1|scaffold_1906 (3431-3535) | |
| 457-569, gnl|mm7|chr14 (29704619-29704515) | |
| 457-569, gnl|Mm7|chr14 (29704495-29704607) | |
| 457-569, gnl|monDom2|scaffold_14 (21409968-21410072) | |
| 457-569, gnl|oryCun1|scaffold_193409 (5838-5943) | |
| 457-569, gnl|panTro1|chr8 (51062783-51062887) | |
| 457-569, gnl|rheMac2|chr9 (46784141-46784037) | |
| 457-569, gnl|rn3|chr16 (7774176-7774072) | |
| 457-569, gnl|tetNig1|chr17 (5745927-5745824) | |
| 672-803, gnl|bosTau2|chr28 (34108592-34108461) | |
| 672-803, gnl|canFam2|chr28 (4652226-4652378) | |
| 672-803, gnl|dasNov1|scaffold_44261 (42176-42327) | |
| 672-803, gnl|echTel1|scaffold_320621 (4698-4547) | |
| 672-803, gnl|fr1|chrUn (90522920-90523066) | |
| 672-803, gnl|galGal2|chr6 (2306298-2306145) | |
| 672-803, gnl|hg17|chr10 (50698207-50698358) | |
| 672-803, gnl|Hg17|chr10 (50698347-50698216) | |
| 672-803, gnl|loxAfr1|scaffold_24130 (10877-11028) | |
| 672-803, gnl|mm7|chr14 (29724986-29724835) | |
| 672-803, gnl|Mm7|chr14 (29724844-29724975) | |
| 672-803, gnl|monDom2|scaffold_14 (21389520-21389670) | |
| 672-803, gnl|oryCun1|scaffold_206900 (41025-41176) | |
| 672-803, gnl|panTro1|chr8 (51040974-51041125) | |
| 672-803, gnl|rheMac2|chr9 (46806592-46806441) | |
| 672-803, gnl|rn3|chr16 (7796240-7796089) | |
| 672-803, gnl|tetNig1|chr17 (5747789-5747643) | |
| 672-803, gnl|xenTro1|scaffold_40 (17469-17314) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 230-381, gnl|bosTau2|chr28 (34142097-34141946) | |
| 230-381, gnl|Hg17|chr10 (50735507-50735356) | |
| 230-381, gnl|Mm7|chr14 (29692329-29692480) | |
| 457-569, gnl|bosTau2|chr28 (34130517-34130405) | |
| 457-569, gnl|canFam2|chr28 (4675521-4675625) | |
| 457-569, gnl|danRer3|chr13 (30107089-30106987) | |
| 457-569, gnl|dasNov1|scaffold_1996 (49875-49771) | |
| 457-569, gnl|echTel1|scaffold_320600 (4581-4685) | |
| 457-569, gnl|fr1|chrUn (90524581-90524689) | |
| 457-569, gnl|galGal2|chr6 (2297505-2297405) | |
| 457-569, gnl|hg17|chr10 (50719990-50720094) | |
| 457-569, gnl|Hg17|chr10 (50720112-50720000) | |
| 457-569, gnl|loxAfr1|scaffold_1906 (3431-3535) | |
| 457-569, gnl|mm7|chr14 (29704619-29704515) | |
| 457-569, gnl|Mm7|chr14 (29704495-29704607) | |
| 457-569, gnl|monDom2|scaffold_14 (21409968-21410072) | |
| 457-569, gnl|oryCun1|scaffold_193409 (5838-5943) | |
| 457-569, gnl|panTro1|chr8 (51062783-51062887) | |
| 457-569, gnl|rheMac2|chr9 (46784141-46784037) | |
| 457-569, gnl|rn3|chr16 (7774176-7774072) | |
| 457-569, gnl|tetNig1|chr17 (5745927-5745824) | |
| 672-803, gnl|bosTau2|chr28 (34108592-34108461) | |
| 672-803, gnl|canFam2|chr28 (4652226-4652378) | |
| 672-803, gnl|dasNov1|scaffold_44261 (42176-42327) | |
| 672-803, gnl|echTel1|scaffold_320621 (4698-4547) | |
| 672-803, gnl|fr1|chrUn (90522920-90523066) | |
| 672-803, gnl|galGal2|chr6 (2306298-2306145) | |
| 672-803, gnl|hg17|chr10 (50698207-50698358) | |
| 672-803, gnl|Hg17|chr10 (50698347-50698216) | |
| 672-803, gnl|loxAfr1|scaffold_24130 (10877-11028) | |
| 672-803, gnl|mm7|chr14 (29724986-29724835) | |
| 672-803, gnl|Mm7|chr14 (29724844-29724975) | |
| 672-803, gnl|monDom2|scaffold_14 (21389520-21389670) | |
| 672-803, gnl|oryCun1|scaffold_206900 (41025-41176) | |
| 672-803, gnl|panTro1|chr8 (51040974-51041125) | |
| 672-803, gnl|rheMac2|chr9 (46806592-46806441) | |
| 672-803, gnl|rn3|chr16 (7796240-7796089) | |
| 672-803, gnl|tetNig1|chr17 (5747789-5747643) | |
| 672-803, gnl|xenTro1|scaffold_40 (17469-17314) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| aor (0.195274) | |
| csk (0.140746) |