Ss1.1-Lng1-LNG010099B08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGTTTAAAACCAAGATGGGTAGATGTCCAGTCTAACTCTATATGATGGTTTTAGGGGA GATGAACCATTGTGGCCCTGCTTCTTACTCTTGCCCTTCAGAAAGGATAAAATACAGATC AACCCACAGGCTTCTGTGAACCCCCAATTCAAGGCTTTAATGATTTCACCCTGATTACAT AACAGAGACGAGCACTAGCTTGGTAGTTTTGTGGCTCGTGCATTTTCAGAAGAATCTCTT TCCTCCACCTTTGGTCTTTTCAGATTGCAATTCTGTGACCCTGTAATTCAGTTACTCCTG GTACGTTGCGGCGAGCATCCAAGGGTAGGTTTCCACTGTTTGCTGTAAGCCCCTGCAGGG CAGACACTCTGCTAGTTTGCCTTTGAGACCCCGGCACCTGGCACCTGTTCATGTATTTAT TGAGCACCTTCTGTGTACCAGGGGCTGGGATACAGTGGTTTAAAAAAAAAAAAAAAAGAT AGGCAAGGCTTTTGCTGTGTCAAGGAGGGAAAACGGATACTGAGCCTGTTCTTACAAGTG CAAAGAGGTCTGTGAAAAGGGAAGTAGAAGATGCTTCAGGAGAATATAATATGGGCACCT AACCTGGTCTCAGAGGTCAAAGGCTTCCCCAAGAAAGTGACATTTAGGCTGAACCTTGAA TGACAAGCAGGAGTAGGTATGACAGAGAACAGGCCTTGGATAAGCGTTTGCTGAATGAGT GAATGAATGAAGTACTGCTTTCCTGCACAGCTGACCCCAGTCTGCTAAAGGACACGAGCC CAGCGACTCTGACCTTCGTCCCTCTAGGTGGTGTCAGTGGATCCATCCCTGTCTTCAGTG AAGGCAAGTGACATGGCATAAAGAATATCTCCAGGGTACAGTTAATCCTCAAAGACCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGTTTAAAACCAAGATGGGTAGATGTCCAGTCTAACTCTATATGATGGTTTTAGGGGA GATGAACCATTGTGGCCCTGCTTCTTACTCTTGCCCTTCAGAAAGGATAAAATACAGATC AACCCACAGGCTTCTGTGAACCCCCAATTCAAGGCTTTAATGATTTCACCCTGATTACAT AACAGAGACGAGCACTAGCTTGGTAGTTTTGTGGCTCGTGCATTTTCAGAAGAATCTCTT TCCTCCACCTTTGGTCTTTTCAGATTGCAATTCTGTGACCCTGTAATTCAGTTACTCCTG GTACGTTGCGGCGAGCATCCAAGGGTAGGTTTCCACTGTTTGCTGTAAGCCCCTGCAGGG CAGACACTCTGCTAGTTTGCCTTTGAGACCCCGGCACCTGGCACCTGTTCATGTATTTAT TGAGCACCTTCTGTGTACCAGGGGCTGGGATACAGTGGTTTAAAAAAAAAAAAAAAAGAT AGGCAAGGCTTTTGCTGTGTCAAGGAGGGAAAACGGATACTGAGCCTGTTCTTACAAGTG CAAAGAGGTCTGTGAAAAGGGAAGTAGAAGATGCTTCAGGAGAATATAATATGGGCACCT AACCTGGTCTCAGAGGTCAAAGGCTTCCCCAAGAAAGTGACATTTAGGCTGAACCTTGAA TGACAAGCAGGAGTAGGTATGACAGAGAACAGGCCTTGGATAAGCGTTTGCTGAATGAGT GAATGAATGAAGTACTGCTTTCCTGCACAGCTGACCCCAGTCTGCTAAAGGACACGAGCC CAGCGACTCTGACCTTCGTCCCTCTAGGTGGTGTCAGTGGATCCATCCCTGTCTTCAGTG AAGGCAAGTGACATGGCATAAAGAATATCTCCAGGGTACAGTTAATCCTCAAAGACCTGA |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 30-239, gnl|bosTau2|chr10 (46876679-46876466) | |
| 30-239, gnl|canFam2|chr5 (8942741-8942411) | |
| 30-239, gnl|dasNov1|scaffold_23526 (6463-6818) | |
| 30-239, gnl|echTel1|scaffold_294655 (21541-21162) | |
| 30-239, gnl|hg17|chr11 (128088089-128088413) | |
| 30-239, gnl|Hg17|chr11 (128088260-128088447) | |
| 30-239, gnl|mm7|chr9 (32423929-32423604) | |
| 30-239, gnl|Mm7|chr9 (32423767-32423574) | |
| 30-239, gnl|monDom2|scaffold_15 (16918191-16918555) | |
| 30-239, gnl|oryCun1|scaffold_207683 (17620-17925) | |
| 30-239, gnl|panTro1|chr9 (130217577-130217901) | |
| 30-239, gnl|rheMac2|chr14 (126844028-126844336) | |
| 30-239, gnl|rn3|chr8 (32300101-32299762) | |
| 412-744, gnl|bosTau2|chr10 (46876016-46875686) | |
| 412-744, gnl|canFam2|chr5 (8942161-8941852) | |
| 412-744, gnl|dasNov1|scaffold_23526 (7063-7387) | |
| 412-744, gnl|echTel1|scaffold_294655 (20876-20573) | |
| 412-744, gnl|hg17|chr11 (128088623-128088951) | |
| 412-744, gnl|Hg17|chr11 (128088626-128088964) | |
| 412-744, gnl|loxAfr1|scaffold_31698 (21573-21895) | |
| 412-744, gnl|mm7|chr9 (32423409-32423103) | |
| 412-744, gnl|Mm7|chr9 (32423404-32423067) | |
| 412-744, gnl|oryCun1|scaffold_207683 (18180-18497) | |
| 412-744, gnl|panTro1|chr9 (130218111-130218436) | |
| 412-744, gnl|rheMac2|chr14 (126844550-126844871) | |
| 412-744, gnl|rn3|chr8 (32299540-32299234) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 30-239, gnl|bosTau2|chr10 (46876679-46876466) | |
| 30-239, gnl|canFam2|chr5 (8942741-8942411) | |
| 30-239, gnl|dasNov1|scaffold_23526 (6463-6818) | |
| 30-239, gnl|echTel1|scaffold_294655 (21541-21162) | |
| 30-239, gnl|hg17|chr11 (128088089-128088413) | |
| 30-239, gnl|Hg17|chr11 (128088260-128088447) | |
| 30-239, gnl|mm7|chr9 (32423929-32423604) | |
| 30-239, gnl|Mm7|chr9 (32423767-32423574) | |
| 30-239, gnl|monDom2|scaffold_15 (16918191-16918555) | |
| 30-239, gnl|oryCun1|scaffold_207683 (17620-17925) | |
| 30-239, gnl|panTro1|chr9 (130217577-130217901) | |
| 30-239, gnl|rheMac2|chr14 (126844028-126844336) | |
| 30-239, gnl|rn3|chr8 (32300101-32299762) | |
| 412-744, gnl|bosTau2|chr10 (46876016-46875686) | |
| 412-744, gnl|canFam2|chr5 (8942161-8941852) | |
| 412-744, gnl|dasNov1|scaffold_23526 (7063-7387) | |
| 412-744, gnl|echTel1|scaffold_294655 (20876-20573) | |
| 412-744, gnl|hg17|chr11 (128088623-128088951) | |
| 412-744, gnl|Hg17|chr11 (128088626-128088964) | |
| 412-744, gnl|loxAfr1|scaffold_31698 (21573-21895) | |
| 412-744, gnl|mm7|chr9 (32423409-32423103) | |
| 412-744, gnl|Mm7|chr9 (32423404-32423067) | |
| 412-744, gnl|oryCun1|scaffold_207683 (18180-18497) | |
| 412-744, gnl|panTro1|chr9 (130218111-130218436) | |
| 412-744, gnl|rheMac2|chr14 (126844550-126844871) | |
| 412-744, gnl|rn3|chr8 (32299540-32299234) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) | |
| jca (0.11396) |