Ss1.1-Lng1-LNG010102E10.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTTTGCAGTCAGTTCCCTCCATGTTCAACTTCAGAGCTCCTCCCAACACCCTGCCAGAG AACCTCCTGCGGAAAGGAAAGGAACGCTATACCTGCAGATACTGTGGCAAGATTTTTCCA AGATCTGCGAACCTGACACGGCACTTGAGAACCCACACAGGAGAGCAGCCTTACAGATGC AAATACTGTGACAGGTCATTCAGCATTTCTTCTAACCTGCAGCGGCACGTCCGCAACATC CACAATAAGGAGAAGCCCTTTAAGTGTCATTTATGTGATAGGTGTTTTGGTCAACAAACC AACTTAGACAGACACCTAAAGAAACATGAGAATGGGAACATGTCTGGTACCGCAACATCA TCGCCTCATTCAGAACTGGAAAGTACAGGTGCGATTCTTGATGACAAGGAAGATGCTTAC TTCACAGAAATCCGAAATTTCATTGGGAATAGCAATCACAGCGGCCAGTCTCCCAGGAAC ACAGAGGAGAGAATGAATGGCAGTCACTTTAAAGATGAAAAGGCTTTGGTGACCAGTCAA AATTCAGACTTACTGGATGATGAAGAAGTAGAAGATGAGGTGTTGTTAGATGAGGAGGAT GAAGACAATGATGTTACTGGGAAAACGGGAAAGGAACCAGTGACAAGTAATTTACATGAA GGAAACCCCGAGGATGACTATGAAGAAACCAGCGGCCTGGAGATGAGTTGCAAGACATCC CCAGTGAGGTATAAAGAGGAAGAATATAAAACTGGACTTTCTGCTCTAGATCATATAAGG CACTTCACAGATAGCCTCAAAATGAGGAAAATGGAAGATAATCAATATACTGAAGCTGAG GTGTCTTCTTTCAGTGCTTCCCATGTGCCCGAGGAACTTAAACAGCCGTTACACAGAAAG TCCAAATCACAGGCATACGCTATGATGTTGTCATTGTCCGACAAGGAGTCCCTCCATCCT TCATCCCACAGTTCTTCCAACATGTGGCACAGTATGGCCAGGGCTGCGGCAGAATCCAGT GCCATCCAGTCCATAAGCCACGTATGACATTCCCAAGGTCGACCAGAGTGGGACCAAGTC CAACAGTAGCATGGCTCTTTCATGTAGGACTATTTAAAAGACTGCTGAGCAGAATGCCTT AGAAACCTGAAGGGTCACTCATGTAAAGTCTGGGGACCTTAAACTGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTTTGCAGTCAGTTCCCTCCATGTTCAACTTCAGAGCTCCTCCCAACACCCTGCCAGAG AACCTCCTGCGGAAAGGAAAGGAACGCTATACCTGCAGATACTGTGGCAAGATTTTTCCA AGATCTGCGAACCTGACACGGCACTTGAGAACCCACACAGGAGAGCAGCCTTACAGATGC AAATACTGTGACAGGTCATTCAGCATTTCTTCTAACCTGCAGCGGCACGTCCGCAACATC CACAATAAGGAGAAGCCCTTTAAGTGTCATTTATGTGATAGGTGTTTTGGTCAACAAACC AACTTAGACAGACACCTAAAGAAACATGAGAATGGGAACATGTCTGGTACCGCAACATCA TCGCCTCATTCAGAACTGGAAAGTACAGGTGCGATTCTTGATGACAAGGAAGATGCTTAC TTCACAGAAATCCGAAATTTCATTGGGAATAGCAATCACAGCGGCCAGTCTCCCAGGAAC ACAGAGGAGAGAATGAATGGCAGTCACTTTAAAGATGAAAAGGCTTTGGTGACCAGTCAA AATTCAGACTTACTGGATGATGAAGAAGTAGAAGATGAGGTGTTGTTAGATGAGGAGGAT GAAGACAATGATGTTACTGGGAAAACGGGAAAGGAACCAGTGACAAGTAATTTACATGAA GGAAACCCCGAGGATGACTATGAAGAAACCAGCGGCCTGGAGATGAGTTGCAAGACATCC CCAGTGAGGTATAAAGAGGAAGAATATAAAACTGGACTTTCTGCTCTAGATCATATAAGG CACTTCACAGATAGCCTCAAAATGAGGAAAATGGAAGATAATCAATATACTGAAGCTGAG GTGTCTTCTTTCAGTGCTTCCCATGTGCCCGAGGAACTTAAACAGCCGTTACACAGAAAG TCCAAATCACAGGCATACGCTATGATGTTGTCATTGTCCGACAAGGAGTCCCTCCATCCT TCATCCCACAGTTCTTCCAACATGTGGCACAGTATGGCCAGGGCTGCGGCAGAATCCAGT GCCATCCAGTCCATAAGCCACGTATGACATTCCCAAGGTCGACCAGAGTGGGACCAAGTC CAACAGTAGCATGGCTCTTTCATGTAGGACTATTTAAAAGACTGCTGAGCAGAATGCCTT AGAAACCTGAAGGGTCACTCATGTAAAGTCTGGGGACCTTAAACTGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 73 entry(ies) | More info |
| Aligned organism(s): 73 entry(ies) | Help | Less info |
| 1-101, gnl|bosTau2|chr1 (63997960-63998060) | |
| 1-101, gnl|canFam2|chr34 (36771333-36771543) | |
| 1-101, gnl|danRer3|chrUn (90576297-90576099) | |
| 1-101, gnl|dasNov1|scaffold_23335 (37942-37732) | |
| 1-101, gnl|echTel1|scaffold_309328 (94631-94419) | |
| 1-101, gnl|fr1|chrUn (260058454-260058658) | |
| 1-101, gnl|galGal2|chr9 (19743930-19743717) | |
| 1-101, gnl|hg17|chr3 (170302528-170302738) | |
| 1-101, gnl|Hg17|chr3 (170302647-170302547) | |
| 1-101, gnl|loxAfr1|scaffold_11620 (4618-4408) | |
| 1-101, gnl|mm7|chr3 (29769116-29769325) | |
| 1-101, gnl|Mm7|chr3 (29769235-29769135) | |
| 1-101, gnl|oryCun1|scaffold_140920 (8001-8211) | |
| 1-101, gnl|panTro1|chr2 (173781571-173781781) | |
| 1-101, gnl|rheMac2|chr2 (117927543-117927333) | |
| 1-101, gnl|rn3|chr2 (114775566-114775776) | |
| 1-101, gnl|tetNig1|chr9 (1442956-1443153) | |
| 1-101, gnl|xenTro1|scaffold_3 (3056237-3056031) | |
| 168-349, gnl|bosTau2|chr1 (64002556-64002737) | |
| 168-349, gnl|canFam2|chr34 (36765688-36765876) | |
| 168-349, gnl|danRer3|chrUn (90582779-90582592) | |
| 168-349, gnl|dasNov1|scaffold_23335 (43154-42964) | |
| 168-349, gnl|fr1|chrUn (260057553-260057734) | |
| 168-349, gnl|galGal2|chr9 (19747852-19747655) | |
| 168-349, gnl|hg17|chr3 (170295560-170295750) | |
| 168-349, gnl|Hg17|chr3 (170295744-170295563) | |
| 168-349, gnl|loxAfr1|scaffold_11620 (10205-10015) | |
| 168-349, gnl|mm7|chr3 (29765538-29765728) | |
| 168-349, gnl|Mm7|chr3 (29765722-29765541) | |
| 168-349, gnl|monDom2|scaffold_52 (3162599-3162417) | |
| 168-349, gnl|oryCun1|scaffold_140920 (2922-3089) | |
| 168-349, gnl|panTro1|chr2 (173773096-173773286) | |
| 168-349, gnl|rheMac2|chr2 (117934811-117934621) | |
| 168-349, gnl|rn3|chr2 (114771289-114771479) | |
| 168-349, gnl|tetNig1|chr9 (1442507-1442692) | |
| 168-349, gnl|xenTro1|scaffold_3 (3058823-3058633) | |
| 170-329, gnl|bosTau2|chr16 (35712703-35712544) | |
| 170-329, gnl|canFam2|chr5 (61007592-61007779) | |
| 170-329, gnl|danRer3|chr20 (25759591-25759402) | |
| 170-329, gnl|dasNov1|scaffold_198683 (989-802) | |
| 170-329, gnl|echTel1|scaffold_162788 (2631-2808) | |
| 170-329, gnl|fr1|chrUn (70374226-70374411) | |
| 170-329, gnl|galGal2|chr21 (947805-947628) | |
| 170-329, gnl|hg17|chr1 (3365288-3365479) | |
| 170-329, gnl|Hg17|chr1 (3365295-3365454) | |
| 170-329, gnl|loxAfr1|scaffold_11620 (10023-10205) | |
| 170-329, gnl|mm7|chr4 (153318387-153318200) | |
| 170-329, gnl|Mm7|chr4 (153318382-153318223) | |
| 170-329, gnl|monDom2|scaffold_201 (970584-970775) | |
| 170-329, gnl|oryCun1|scaffold_140920 (3090-2922) | |
| 170-329, gnl|panTro1|chr1 (3218122-3218313) | |
| 170-329, gnl|rheMac2|chr1 (6383258-6383448) | |
| 170-329, gnl|rn3|chr2 (114771473-114771289) | |
| 170-329, gnl|tetNig1|chr9 (1442692-1442507) | |
| 170-329, gnl|xenTro1|scaffold_400 (1129437-1129626) | |
| 487-730, gnl|bosTau2|chr1 (64009618-64009861) | |
| 487-730, gnl|canFam2|chr34 (36759495-36759651) | |
| 487-730, gnl|danRer3|chrUn (90593197-90593044) | |
| 487-730, gnl|galGal2|chr9 (19751650-19751494) | |
| 487-730, gnl|hg17|chr3 (170290480-170290636) | |
| 487-730, gnl|Hg17|chr3 (170290731-170290488) | |
| 487-730, gnl|loxAfr1|scaffold_11620 (16602-16447) | |
| 487-730, gnl|mm7|chr3 (29759788-29759944) | |
| 487-730, gnl|Mm7|chr3 (29760039-29759796) | |
| 487-730, gnl|monDom2|scaffold_52 (3168311-3168151) | |
| 487-730, gnl|oryCun1|scaffold_205215 (3254-3098) | |
| 487-730, gnl|panTro1|chr2 (173768032-173768188) | |
| 487-730, gnl|rheMac2|chr2 (117939460-117939304) | |
| 487-730, gnl|rn3|chr2 (114765607-114765763) | |
| 487-730, gnl|xenTro1|scaffold_3 (3061779-3061623) | |
| 910-1188, gnl|bosTau2|chr1 (64015703-64015981) | |
| 910-1188, gnl|Hg17|chr3 (170285536-170285258) | |
| 910-1188, gnl|Mm7|chr3 (29755338-29755060) |
| Aligned organism(s): 73 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-101, gnl|bosTau2|chr1 (63997960-63998060) | |
| 1-101, gnl|canFam2|chr34 (36771333-36771543) | |
| 1-101, gnl|danRer3|chrUn (90576297-90576099) | |
| 1-101, gnl|dasNov1|scaffold_23335 (37942-37732) | |
| 1-101, gnl|echTel1|scaffold_309328 (94631-94419) | |
| 1-101, gnl|fr1|chrUn (260058454-260058658) | |
| 1-101, gnl|galGal2|chr9 (19743930-19743717) | |
| 1-101, gnl|hg17|chr3 (170302528-170302738) | |
| 1-101, gnl|Hg17|chr3 (170302647-170302547) | |
| 1-101, gnl|loxAfr1|scaffold_11620 (4618-4408) | |
| 1-101, gnl|mm7|chr3 (29769116-29769325) | |
| 1-101, gnl|Mm7|chr3 (29769235-29769135) | |
| 1-101, gnl|oryCun1|scaffold_140920 (8001-8211) | |
| 1-101, gnl|panTro1|chr2 (173781571-173781781) | |
| 1-101, gnl|rheMac2|chr2 (117927543-117927333) | |
| 1-101, gnl|rn3|chr2 (114775566-114775776) | |
| 1-101, gnl|tetNig1|chr9 (1442956-1443153) | |
| 1-101, gnl|xenTro1|scaffold_3 (3056237-3056031) | |
| 168-349, gnl|bosTau2|chr1 (64002556-64002737) | |
| 168-349, gnl|canFam2|chr34 (36765688-36765876) | |
| 168-349, gnl|danRer3|chrUn (90582779-90582592) | |
| 168-349, gnl|dasNov1|scaffold_23335 (43154-42964) | |
| 168-349, gnl|fr1|chrUn (260057553-260057734) | |
| 168-349, gnl|galGal2|chr9 (19747852-19747655) | |
| 168-349, gnl|hg17|chr3 (170295560-170295750) | |
| 168-349, gnl|Hg17|chr3 (170295744-170295563) | |
| 168-349, gnl|loxAfr1|scaffold_11620 (10205-10015) | |
| 168-349, gnl|mm7|chr3 (29765538-29765728) | |
| 168-349, gnl|Mm7|chr3 (29765722-29765541) | |
| 168-349, gnl|monDom2|scaffold_52 (3162599-3162417) | |
| 168-349, gnl|oryCun1|scaffold_140920 (2922-3089) | |
| 168-349, gnl|panTro1|chr2 (173773096-173773286) | |
| 168-349, gnl|rheMac2|chr2 (117934811-117934621) | |
| 168-349, gnl|rn3|chr2 (114771289-114771479) | |
| 168-349, gnl|tetNig1|chr9 (1442507-1442692) | |
| 168-349, gnl|xenTro1|scaffold_3 (3058823-3058633) | |
| 170-329, gnl|bosTau2|chr16 (35712703-35712544) | |
| 170-329, gnl|canFam2|chr5 (61007592-61007779) | |
| 170-329, gnl|danRer3|chr20 (25759591-25759402) | |
| 170-329, gnl|dasNov1|scaffold_198683 (989-802) | |
| 170-329, gnl|echTel1|scaffold_162788 (2631-2808) | |
| 170-329, gnl|fr1|chrUn (70374226-70374411) | |
| 170-329, gnl|galGal2|chr21 (947805-947628) | |
| 170-329, gnl|hg17|chr1 (3365288-3365479) | |
| 170-329, gnl|Hg17|chr1 (3365295-3365454) | |
| 170-329, gnl|loxAfr1|scaffold_11620 (10023-10205) | |
| 170-329, gnl|mm7|chr4 (153318387-153318200) | |
| 170-329, gnl|Mm7|chr4 (153318382-153318223) | |
| 170-329, gnl|monDom2|scaffold_201 (970584-970775) | |
| 170-329, gnl|oryCun1|scaffold_140920 (3090-2922) | |
| 170-329, gnl|panTro1|chr1 (3218122-3218313) | |
| 170-329, gnl|rheMac2|chr1 (6383258-6383448) | |
| 170-329, gnl|rn3|chr2 (114771473-114771289) | |
| 170-329, gnl|tetNig1|chr9 (1442692-1442507) | |
| 170-329, gnl|xenTro1|scaffold_400 (1129437-1129626) | |
| 487-730, gnl|bosTau2|chr1 (64009618-64009861) | |
| 487-730, gnl|canFam2|chr34 (36759495-36759651) | |
| 487-730, gnl|danRer3|chrUn (90593197-90593044) | |
| 487-730, gnl|galGal2|chr9 (19751650-19751494) | |
| 487-730, gnl|hg17|chr3 (170290480-170290636) | |
| 487-730, gnl|Hg17|chr3 (170290731-170290488) | |
| 487-730, gnl|loxAfr1|scaffold_11620 (16602-16447) | |
| 487-730, gnl|mm7|chr3 (29759788-29759944) | |
| 487-730, gnl|Mm7|chr3 (29760039-29759796) | |
| 487-730, gnl|monDom2|scaffold_52 (3168311-3168151) | |
| 487-730, gnl|oryCun1|scaffold_205215 (3254-3098) | |
| 487-730, gnl|panTro1|chr2 (173768032-173768188) | |
| 487-730, gnl|rheMac2|chr2 (117939460-117939304) | |
| 487-730, gnl|rn3|chr2 (114765607-114765763) | |
| 487-730, gnl|xenTro1|scaffold_3 (3061779-3061623) | |
| 910-1188, gnl|bosTau2|chr1 (64015703-64015981) | |
| 910-1188, gnl|Hg17|chr3 (170285536-170285258) | |
| 910-1188, gnl|Mm7|chr3 (29755338-29755060) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.146284) | |
| tra (0.123092) |