Non-Coding RNA Search

Ss1.1-Lng1-LNG010105D02.5

Sequence:


               
               TGGCGGACCCTGTGAGGCCTCTCTGCTCTCACTACGGGGCTGTGGTGGGGCTGCATGCTC
TCGGCTGGAAGGCTGTAGAGCGAGTCCTGTACCCTCACCTTTCCACTTACTGGACAAATC
TGCAGGCTGTGCTAGATGATTATTCGGTATCTAATGCCCAGGTTAAAGCAGATGGGCACA
AAGTCTATGGAGCCATTCTGGTGGCAGTGGAGCGACTGCTGAAGATGAAGGCCCAGGCAG
CAGAGCCCAACAAGGGTGGGCCAGGCACCGGGGGGTGCCGGCGCTCGGACGACCTGCCCT
GGGACAGTCTTCTCCTGCAGGAGTCTCCTTCCGGGGGCAGCGCAGAGCCAGGCTTTGGGT
CTGGTCTCCCACTGCCGCCTGGAGGCGCGGGGCCGGAGGATCCTTCCCCTTCGGTGACCC
TGGCGGACATCTACCGGGAGCTCTATGCCTTCTTCGGTGACAGCTTGGCCACCCGCTTTG
GCACGGGTCAGGCCGCGCCCACGGCCCCGCGGCCACCCGGAGACAAGAAGGAGCCGGCGC
CAGCCCCGGACTCGGTGCGTAAGATGCCGCAGCTGACGGCCAATGCCATGGTTAGCCCGC
AGGGCGACGAGAGCCCCCGGGGTAGCGGCCCCGCATCAGCCTCTGCCCCTGCCGCCGCTG
AGAGCAGGCCGCTACCGCGCGTGCACCGGGCGCGGGGAGCGCCCCGACAGCAGGGCCCGG
GGACCGGCACCCGGGACGTCTTCCAGAAGAGCCGTTTCGCCCCGCGTGGCGCTCCTCACT
TCCGTTTCATCATCGCTGGGCGGCAGGCCGGGAGGCGATGCCGCGGGCGCCTCTTCCAGA
CCGCCTTCCCCGCGCCCTATGGGCCCAGCCCGGCCTCCCGCTACGTGCAGAAGCTGCCCA
TGATCGGCCGCACCAGCCGCCCTGCCCGCCGGTGGGCGCTCTCGGACTACTCCTTGTACC
TGCCGCTTTGAGGCGGCGCTCGACCTCCCCTCTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCGGACCCTGTGAGGCCTCTCTGCTCTCACTACGGGGCTGTGGTGGGGCTGCATGCTC
TCGGCTGGAAGGCTGTAGAGCGAGTCCTGTACCCTCACCTTTCCACTTACTGGACAAATC
TGCAGGCTGTGCTAGATGATTATTCGGTATCTAATGCCCAGGTTAAAGCAGATGGGCACA
AAGTCTATGGAGCCATTCTGGTGGCAGTGGAGCGACTGCTGAAGATGAAGGCCCAGGCAG
CAGAGCCCAACAAGGGTGGGCCAGGCACCGGGGGGTGCCGGCGCTCGGACGACCTGCCCT
GGGACAGTCTTCTCCTGCAGGAGTCTCCTTCCGGGGGCAGCGCAGAGCCAGGCTTTGGGT
CTGGTCTCCCACTGCCGCCTGGAGGCGCGGGGCCGGAGGATCCTTCCCCTTCGGTGACCC
TGGCGGACATCTACCGGGAGCTCTATGCCTTCTTCGGTGACAGCTTGGCCACCCGCTTTG
GCACGGGTCAGGCCGCGCCCACGGCCCCGCGGCCACCCGGAGACAAGAAGGAGCCGGCGC
CAGCCCCGGACTCGGTGCGTAAGATGCCGCAGCTGACGGCCAATGCCATGGTTAGCCCGC
AGGGCGACGAGAGCCCCCGGGGTAGCGGCCCCGCATCAGCCTCTGCCCCTGCCGCCGCTG
AGAGCAGGCCGCTACCGCGCGTGCACCGGGCGCGGGGAGCGCCCCGACAGCAGGGCCCGG
GGACCGGCACCCGGGACGTCTTCCAGAAGAGCCGTTTCGCCCCGCGTGGCGCTCCTCACT
TCCGTTTCATCATCGCTGGGCGGCAGGCCGGGAGGCGATGCCGCGGGCGCCTCTTCCAGA
CCGCCTTCCCCGCGCCCTATGGGCCCAGCCCGGCCTCCCGCTACGTGCAGAAGCTGCCCA
TGATCGGCCGCACCAGCCGCCCTGCCCGCCGGTGGGCGCTCTCGGACTACTCCTTGTACC
TGCCGCTTTGAGGCGGCGCTCGACCTCCCCTCTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|46577572|sp|Q9Y6J9|TAF6L_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|46577572|sp|Q9Y6J9|TAF6L_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               200-995, gnl|bosTau2|chr29 (32669492-32668697)
               

               
               200-995, gnl|Hg17|chr11 (62310564-62311368)
               

               
               200-995, gnl|Mm7|chr19 (8455453-8454674)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               200-995, gnl|bosTau2|chr29 (32669492-32668697)
               

               
               200-995, gnl|Hg17|chr11 (62310564-62311368)
               

               
               200-995, gnl|Mm7|chr19 (8455453-8454674)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	200-995, gnl\|bosTau2\|chr29 (32669492-32668697)
	200-995, gnl\|Hg17\|chr11 (62310564-62311368)
	200-995, gnl\|Mm7\|chr19 (8455453-8454674)