Non-Coding RNA Search

Ss1.1-Lng1-LNG010106A07.5

Sequence:


               
               ACACCCCGGGGCAAGATGGCGGTCTGGCCGCGGCCGCTGCCCCGGGTCTGGTACAGCTCG
GCAGTTTGGGGCTGAAGCTGTGGTCACTGCGGCCCCGACCTCTAGCACCGGGGCCTCGAG
CGGATAAAGGTCTATGGCCTGCGGGTAGCGAGTGGGGACAGGGTCTTGGGTTCTCCGGGG
GCTGGGGCCGGGGACTTGGAGGGAGGTGGCCCGGAGGCCCGAGTCCCTGCTTTGCCTGGT
CGGAGGGGCAGGTGCTGGGGGCTAGCTTTCGGGCTCCAAGGGTGTCTCTTCGAGTCCTTT
TTACCTCTGGGACAATAGGCCTTTATAATCGGACTTATCCTGGGTGGAAAAGACTTGTTA
TTGTCGTTGTTGATGCTGAGAAAAGACGCCGGGCCTCAGGAGTCATCCAAACCGGAGTTT
GAATCCTACTTATTCTGACCTTGGGTAAATTCCCTCTCCTCTCTGAGCCTTACTTTCCAA
CTCTGTAAAATGGAATAATGAGCTCGTGCCACAGAGGGTGATGTGTAATTCAAATTTTAG
TACTGTGCCTGACACTCGGCTCTCAATAAAAGCAGCTGGTGTTAATGATATCAATAAAGA
AAAACTTGGTAGTGATCTAACTTAGCCCCACAGGCAGCCTTACATTCTCGACTTTTCTTT
GCCTTCTGTGAATAGGAGGGTCCCTGGGTCTTCGGTATTTCACTTAAAATAAATGATCCT
TTGGAGTTAGGAGTGGATTCAAATTCAGGGACCTAGAGAGCTCTGGCAAGACATGTCCCT
TCTCTGTGTGAAGGTGGGATTGAAGATAGCCTGCAGGGGAGTTCCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACCCCGGGGCAAGATGGCGGTCTGGCCGCGGCCGCTGCCCCGGGTCTGGTACAGCTCG
GCAGTTTGGGGCTGAAGCTGTGGTCACTGCGGCCCCGACCTCTAGCACCGGGGCCTCGAG
CGGATAAAGGTCTATGGCCTGCGGGTAGCGAGTGGGGACAGGGTCTTGGGTTCTCCGGGG
GCTGGGGCCGGGGACTTGGAGGGAGGTGGCCCGGAGGCCCGAGTCCCTGCTTTGCCTGGT
CGGAGGGGCAGGTGCTGGGGGCTAGCTTTCGGGCTCCAAGGGTGTCTCTTCGAGTCCTTT
TTACCTCTGGGACAATAGGCCTTTATAATCGGACTTATCCTGGGTGGAAAAGACTTGTTA
TTGTCGTTGTTGATGCTGAGAAAAGACGCCGGGCCTCAGGAGTCATCCAAACCGGAGTTT
GAATCCTACTTATTCTGACCTTGGGTAAATTCCCTCTCCTCTCTGAGCCTTACTTTCCAA
CTCTGTAAAATGGAATAATGAGCTCGTGCCACAGAGGGTGATGTGTAATTCAAATTTTAG
TACTGTGCCTGACACTCGGCTCTCAATAAAAGCAGCTGGTGTTAATGATATCAATAAAGA
AAAACTTGGTAGTGATCTAACTTAGCCCCACAGGCAGCCTTACATTCTCGACTTTTCTTT
GCCTTCTGTGAATAGGAGGGTCCCTGGGTCTTCGGTATTTCACTTAAAATAAATGATCCT
TTGGAGTTAGGAGTGGATTCAAATTCAGGGACCTAGAGAGCTCTGGCAAGACATGTCCCT
TCTCTGTGTGAAGGTGGGATTGAAGATAGCCTGCAGGGGAGTTCCCGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-786, gnl|bosTau2|chr17 (35598765-35599564)
               

               
               1-786, gnl|Hg17|chr12 (108378161-108378982)
               

               
               1-786, gnl|Mm7|chr5 (113602609-113603381)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-786, gnl|bosTau2|chr17 (35598765-35599564)
               

               
               1-786, gnl|Hg17|chr12 (108378161-108378982)
               

               
               1-786, gnl|Mm7|chr5 (113602609-113603381)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               pty (0.285429)
               

               
               cst (0.140036)
               

               
               pgl (0.118483)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.285429)
               

               
               cst (0.140036)
               

               
               pgl (0.118483)
               

               
               jca (0.11396)

	1-786, gnl\|bosTau2\|chr17 (35598765-35599564)
	1-786, gnl\|Hg17\|chr12 (108378161-108378982)
	1-786, gnl\|Mm7\|chr5 (113602609-113603381)