Ss1.1-Lng1-LNG010108A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCGGGGAGGTTGAGGCGGAGGAGCGCGCGGTCGGCCCGCCGTAGCGGTTACCGCTGGG GCCGCAGCCCCATGTCTTGTGGCTGCCTCGCCGGCTTGGGCGTCCGGGCCGTGAGACCGC GCGGTACTGCCCCGCGCCCTCTTGGCCAACGTTAGGCGAGGGGCCGAGCCCGCCCCCCCC TCCCCAGCATGCGCACCTCGTACACCGTGACCCTGCCCGAGGAGCCCCCCGCCGCCCCCT CTAGTGGCTACAACTGGCAGAAGGGGCCGCGATCCCCTCTCTCCCCTTCCCTGCTGCTCT CCACCTTCGTGGGGCTCCTGCTCAACAAAGCCAAGAACTCTAAGAGCGCCCAGGGTCTGG CTGGTCTTCGAAACCTTGGGAACACGTGCTTCATGAACTCCATCCTGCAGTGCCTGAGCA ACACCCGGGAGCTGAGAGACTACTGCCTCCAGAGGCTCTACATGCGGGACCTCAGCCACA GCAGCAGTGCACACACGGCCCTCATGGAAGAGTTTGCAAAACTAATCCAGACCATATGGA CCTCATCCCCCAATGATGTGGTGAGCCCCTCTGAGTTCAAGACCCAGATCCAGAGATACG CACCGCGCTTCGTCGGCTATAATCAGCAGGACGCTCAGGAGTTTCTTCGCTTCCTTCTGG ATGGGCTCCACAACGAGGTGAACCGGGTCACAGTGAGGCCCAAGTCCAGTCCTGAGGGCC TCGACCATCTCCCTGATGATGAGAAAGGGCGCCAGATGTGGAGGAAATATCTAGAACGGG AAGACAGTCGGATCGGGGATCTCTTCGTTGGGCAGCTGAAGAGCTCCCTGACGTGTACGG ATTGTGGTTACTGTTCTACAGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCGGGGAGGTTGAGGCGGAGGAGCGCGCGGTCGGCCCGCCGTAGCGGTTACCGCTGGG GCCGCAGCCCCATGTCTTGTGGCTGCCTCGCCGGCTTGGGCGTCCGGGCCGTGAGACCGC GCGGTACTGCCCCGCGCCCTCTTGGCCAACGTTAGGCGAGGGGCCGAGCCCGCCCCCCCC TCCCCAGCATGCGCACCTCGTACACCGTGACCCTGCCCGAGGAGCCCCCCGCCGCCCCCT CTAGTGGCTACAACTGGCAGAAGGGGCCGCGATCCCCTCTCTCCCCTTCCCTGCTGCTCT CCACCTTCGTGGGGCTCCTGCTCAACAAAGCCAAGAACTCTAAGAGCGCCCAGGGTCTGG CTGGTCTTCGAAACCTTGGGAACACGTGCTTCATGAACTCCATCCTGCAGTGCCTGAGCA ACACCCGGGAGCTGAGAGACTACTGCCTCCAGAGGCTCTACATGCGGGACCTCAGCCACA GCAGCAGTGCACACACGGCCCTCATGGAAGAGTTTGCAAAACTAATCCAGACCATATGGA CCTCATCCCCCAATGATGTGGTGAGCCCCTCTGAGTTCAAGACCCAGATCCAGAGATACG CACCGCGCTTCGTCGGCTATAATCAGCAGGACGCTCAGGAGTTTCTTCGCTTCCTTCTGG ATGGGCTCCACAACGAGGTGAACCGGGTCACAGTGAGGCCCAAGTCCAGTCCTGAGGGCC TCGACCATCTCCCTGATGATGAGAAAGGGCGCCAGATGTGGAGGAAATATCTAGAACGGG AAGACAGTCGGATCGGGGATCTCTTCGTTGGGCAGCTGAAGAGCTCCCTGACGTGTACGG ATTGTGGTTACTGTTCTACAGTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 386-510, gnl|bosTau2|chr15 (14443813-14443689) | |
| 386-510, gnl|canFam2|chr5 (17553225-17553089) | |
| 386-510, gnl|danRer3|chr15 (25234951-25234819) | |
| 386-510, gnl|dasNov1|scaffold_16381 (8816-8681) | |
| 386-510, gnl|echTel1|scaffold_306469 (7567-7431) | |
| 386-510, gnl|fr1|chrUn (102717040-102716904) | |
| 386-510, gnl|hg17|chr11 (118735450-118735586) | |
| 386-510, gnl|Hg17|chr11 (118735581-118735457) | |
| 386-510, gnl|loxAfr1|scaffold_51232 (4410-4274) | |
| 386-510, gnl|mm7|chr9 (44024507-44024371) | |
| 386-510, gnl|Mm7|chr9 (44024374-44024498) | |
| 386-510, gnl|monDom2|scaffold_2 (119117939-119117803) | |
| 386-510, gnl|oryCun1|scaffold_197393 (40071-39935) | |
| 386-510, gnl|panTro1|chr9 (120758276-120758412) | |
| 386-510, gnl|rheMac2|chr14 (117772271-117772407) | |
| 386-510, gnl|rn3|chr8 (47081175-47081039) | |
| 386-510, gnl|tetNig1|chr16 (8032879-8033014) | |
| 386-510, gnl|xenTro1|scaffold_75 (803282-803415) | |
| 623-733, gnl|bosTau2|chr15 (14443324-14443214) | |
| 623-733, gnl|Hg17|chr11 (118735054-118734944) | |
| 623-733, gnl|Mm7|chr9 (44025557-44025667) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 386-510, gnl|bosTau2|chr15 (14443813-14443689) | |
| 386-510, gnl|canFam2|chr5 (17553225-17553089) | |
| 386-510, gnl|danRer3|chr15 (25234951-25234819) | |
| 386-510, gnl|dasNov1|scaffold_16381 (8816-8681) | |
| 386-510, gnl|echTel1|scaffold_306469 (7567-7431) | |
| 386-510, gnl|fr1|chrUn (102717040-102716904) | |
| 386-510, gnl|hg17|chr11 (118735450-118735586) | |
| 386-510, gnl|Hg17|chr11 (118735581-118735457) | |
| 386-510, gnl|loxAfr1|scaffold_51232 (4410-4274) | |
| 386-510, gnl|mm7|chr9 (44024507-44024371) | |
| 386-510, gnl|Mm7|chr9 (44024374-44024498) | |
| 386-510, gnl|monDom2|scaffold_2 (119117939-119117803) | |
| 386-510, gnl|oryCun1|scaffold_197393 (40071-39935) | |
| 386-510, gnl|panTro1|chr9 (120758276-120758412) | |
| 386-510, gnl|rheMac2|chr14 (117772271-117772407) | |
| 386-510, gnl|rn3|chr8 (47081175-47081039) | |
| 386-510, gnl|tetNig1|chr16 (8032879-8033014) | |
| 386-510, gnl|xenTro1|scaffold_75 (803282-803415) | |
| 623-733, gnl|bosTau2|chr15 (14443324-14443214) | |
| 623-733, gnl|Hg17|chr11 (118735054-118734944) | |
| 623-733, gnl|Mm7|chr9 (44025557-44025667) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| mcp (0.170648) | |
| hlv (0.139256) | |
| clu (0.119646) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| hlv (0.139256) | |
| clu (0.119646) | |
| ecc (0.115035) |