Ss1.1-Lng1-LNG010111D08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCGGAGAGGCGGGGAAGTGGCGGTGGGAC GCGATTCCCCGCGCGGAGCCAGGCCGTGGCAGCGGGAGAAGCGGCGGCCAGCAGCGCCGC GGGGCCGGCGGGAAGCGACCCCCCGGGGGGGACAGAGCCTCCCCTCGCCGCCTTTGTAGT TGAGAAGGTGGAGAAGTGGCAGCCGGCGTACTTGCAGGGAAGCGGGGCCGGCGCGGGCGG CCGAGGGTCCGGGTGAGCCCGCGGGCGGACACGAGATGCCGCTGCTACACCGAAAGCCGT TTGTGAGACAGAAGCCGCCCGCGGACCTACGGCCCGACGAGGAAGTTTTCTACTGTAAAG TCACCAACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACA GTCTTGTGTGGAGTTGTGCTGTGACGGGTAGACCTGGACTGACCTATCAAGAAGCACTTG AGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTTTCCAGAACCACTAATTGTTCCAG TTTTATACTTGACCAACCTTACCCATCGTTCACGCTTACATGAAATTTGTGATGATATTT TTGCATATGTCAAAAATCGATATTTTGTTGAAGAAACTGTGGAAGTCATTAGGAACAATG GTTCAAGGTTACAGTGTAGGATTTTGGAAGTCCTCCCTCCATCACACCAAAATGGTTTTG CTAATGGACATGACAGTTGTATAGATGGGGAAACTATTATCATTAGTGATAGTGATGATT CAGAAACACAAAACAGTTCTTTTCAAAACGGGAAGAAAAAAGATGCAATTGATCCCTTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCGGAGAGGCGGGGAAGTGGCGGTGGGAC GCGATTCCCCGCGCGGAGCCAGGCCGTGGCAGCGGGAGAAGCGGCGGCCAGCAGCGCCGC GGGGCCGGCGGGAAGCGACCCCCCGGGGGGGACAGAGCCTCCCCTCGCCGCCTTTGTAGT TGAGAAGGTGGAGAAGTGGCAGCCGGCGTACTTGCAGGGAAGCGGGGCCGGCGCGGGCGG CCGAGGGTCCGGGTGAGCCCGCGGGCGGACACGAGATGCCGCTGCTACACCGAAAGCCGT TTGTGAGACAGAAGCCGCCCGCGGACCTACGGCCCGACGAGGAAGTTTTCTACTGTAAAG TCACCAACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACA GTCTTGTGTGGAGTTGTGCTGTGACGGGTAGACCTGGACTGACCTATCAAGAAGCACTTG AGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTTTCCAGAACCACTAATTGTTCCAG TTTTATACTTGACCAACCTTACCCATCGTTCACGCTTACATGAAATTTGTGATGATATTT TTGCATATGTCAAAAATCGATATTTTGTTGAAGAAACTGTGGAAGTCATTAGGAACAATG GTTCAAGGTTACAGTGTAGGATTTTGGAAGTCCTCCCTCCATCACACCAAAATGGTTTTG CTAATGGACATGACAGTTGTATAGATGGGGAAACTATTATCATTAGTGATAGTGATGATT CAGAAACACAAAACAGTTCTTTTCAAAACGGGAAGAAAAAAGATGCAATTGATCCCTTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-239, gnl|bosTau2|chr21 (29669501-29669266) | |
| 1-239, gnl|Hg17|chr14 (34414310-34414085) | |
| 1-239, gnl|Mm7|chr12 (52954702-52954503) | |
| 389-669, gnl|bosTau2|chr21 (29657724-29657444) | |
| 389-669, gnl|canFam2|chr8 (16683735-16684028) | |
| 389-669, gnl|danRer3|chr17 (5554856-5555127) | |
| 389-669, gnl|dasNov1|scaffold_99906 (526-233) | |
| 389-669, gnl|echTel1|scaffold_293848 (11189-11482) | |
| 389-669, gnl|fr1|chrUn (93254299-93254586) | |
| 389-669, gnl|galGal2|chr5 (32894740-32895030) | |
| 389-669, gnl|hg17|chr14 (34400995-34401288) | |
| 389-669, gnl|Hg17|chr14 (34401279-34400999) | |
| 389-669, gnl|loxAfr1|scaffold_156499 (1727-1455) | |
| 389-669, gnl|mm7|chr12 (52943450-52943743) | |
| 389-669, gnl|Mm7|chr12 (52943734-52943454) | |
| 389-669, gnl|monDom2|scaffold_73 (3518934-3518639) | |
| 389-669, gnl|oryCun1|scaffold_197682 (50657-50364) | |
| 389-669, gnl|panTro1|chr15 (33557238-33557531) | |
| 389-669, gnl|rheMac2|chr7 (97825988-97826281) | |
| 389-669, gnl|rn3|chr6 (75325223-75325514) | |
| 389-669, gnl|tetNig1|chrUn_random (82997563-82997277) | |
| 389-669, gnl|xenTro1|scaffold_117 (870120-869827) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-239, gnl|bosTau2|chr21 (29669501-29669266) | |
| 1-239, gnl|Hg17|chr14 (34414310-34414085) | |
| 1-239, gnl|Mm7|chr12 (52954702-52954503) | |
| 389-669, gnl|bosTau2|chr21 (29657724-29657444) | |
| 389-669, gnl|canFam2|chr8 (16683735-16684028) | |
| 389-669, gnl|danRer3|chr17 (5554856-5555127) | |
| 389-669, gnl|dasNov1|scaffold_99906 (526-233) | |
| 389-669, gnl|echTel1|scaffold_293848 (11189-11482) | |
| 389-669, gnl|fr1|chrUn (93254299-93254586) | |
| 389-669, gnl|galGal2|chr5 (32894740-32895030) | |
| 389-669, gnl|hg17|chr14 (34400995-34401288) | |
| 389-669, gnl|Hg17|chr14 (34401279-34400999) | |
| 389-669, gnl|loxAfr1|scaffold_156499 (1727-1455) | |
| 389-669, gnl|mm7|chr12 (52943450-52943743) | |
| 389-669, gnl|Mm7|chr12 (52943734-52943454) | |
| 389-669, gnl|monDom2|scaffold_73 (3518934-3518639) | |
| 389-669, gnl|oryCun1|scaffold_197682 (50657-50364) | |
| 389-669, gnl|panTro1|chr15 (33557238-33557531) | |
| 389-669, gnl|rheMac2|chr7 (97825988-97826281) | |
| 389-669, gnl|rn3|chr6 (75325223-75325514) | |
| 389-669, gnl|tetNig1|chrUn_random (82997563-82997277) | |
| 389-669, gnl|xenTro1|scaffold_117 (870120-869827) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.127291) | |
| thg (0.126791) |