Ss1.1-LyN1-MLN01A010057.5
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CCGGCTAGAGCGTCTTACCCCCAGCTGCTGTCCAGCCGGCTAGAGCGTCTTTTCTAGCTT
GAATGCCTGGTGGCTGAGGCCGCTAGGGAGTCCCTCCTGTTGGGACCCGCGTGTGACCTT
CCCGCCTGCGGAGCGATGCTGCCGGCGGCTGCAAGCTCCCTGTGGGGGCCGTGTTTCGGG
CTTCGGGCCGCTGCGCTCCGCGTCGCCAGGCACCAGGGACCGAGACTGTGCGGTGTGCGG
TTGATGAGATGCAGCAGCCATCGAAAGGGGGAGGCTCTTGCTGGGGCCCCCCTGGATAAC
GCCCCCAAGGAGTATCCCCCCAAAATCCAGCAGCTGGTTCAGGACATTGCCAGCCTTACG
CTCCTGGAGATCTCAGACCTCAACGAGCTCCTGAAGAAAACGCTGAAGATCCAGGACGTT
GGGTTCATGCCCATGGGTGCCGTGGCCCCTGGCGCTCCCCCTGCCGCCGCCGCCCCAGAG
GCCGCGGAAGAAGACCTCCCCAAACGGAAGGAGCAGACGCATTTCACCGTCCGCCTGACG
GAGGCGAAGCCCGTGGACAAGGTGAAGCTGATCAAGGAGATTAAAAGCCACATCCAGGGC
ATCAACCTGGTGCAGGCGAAGAAGCTGGTGGAATCCCTGCCCCAGGAAATCAAAGCCAAC
GTGCCCAAAGCTGAGGCTGAGAAGATCAAGGCGGCCCTGGAGGCGGTGGGCGGCACCGTG
GTTCTGGAGTAGGCTTCCCGGAGGACCGTGCACAGGGGTCCGGCCCCCCCCTCCCTCCCC
GTGTGGGGCGCCACCTGCTCCCCGCCCAGTGCCCAGGCTCAGTGGACGGAGAGGCCTTGG
AGCAGAACTGGCACCTGCAGCGCGTGGCCAGCTCCGTCCTGGGACAGACGGAAGGACCTC
CTGAGATGGGGAGGGGGGCGGCCGCGCCTGGGCCCGCCGGTGGCAGGGCTCTGGAACCTT
CCAGGTCACGCGCCCCCTGGTGGTCTGTGAGAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CCGGCTAGAGCGTCTTACCCCCAGCTGCTGTCCAGCCGGCTAGAGCGTCTTTTCTAGCTT
GAATGCCTGGTGGCTGAGGCCGCTAGGGAGTCCCTCCTGTTGGGACCCGCGTGTGACCTT
CCCGCCTGCGGAGCGATGCTGCCGGCGGCTGCAAGCTCCCTGTGGGGGCCGTGTTTCGGG
CTTCGGGCCGCTGCGCTCCGCGTCGCCAGGCACCAGGGACCGAGACTGTGCGGTGTGCGG
TTGATGAGATGCAGCAGCCATCGAAAGGGGGAGGCTCTTGCTGGGGCCCCCCTGGATAAC
GCCCCCAAGGAGTATCCCCCCAAAATCCAGCAGCTGGTTCAGGACATTGCCAGCCTTACG
CTCCTGGAGATCTCAGACCTCAACGAGCTCCTGAAGAAAACGCTGAAGATCCAGGACGTT
GGGTTCATGCCCATGGGTGCCGTGGCCCCTGGCGCTCCCCCTGCCGCCGCCGCCCCAGAG
GCCGCGGAAGAAGACCTCCCCAAACGGAAGGAGCAGACGCATTTCACCGTCCGCCTGACG
GAGGCGAAGCCCGTGGACAAGGTGAAGCTGATCAAGGAGATTAAAAGCCACATCCAGGGC
ATCAACCTGGTGCAGGCGAAGAAGCTGGTGGAATCCCTGCCCCAGGAAATCAAAGCCAAC
GTGCCCAAAGCTGAGGCTGAGAAGATCAAGGCGGCCCTGGAGGCGGTGGGCGGCACCGTG
GTTCTGGAGTAGGCTTCCCGGAGGACCGTGCACAGGGGTCCGGCCCCCCCCTCCCTCCCC
GTGTGGGGCGCCACCTGCTCCCCGCCCAGTGCCCAGGCTCAGTGGACGGAGAGGCCTTGG
AGCAGAACTGGCACCTGCAGCGCGTGGCCAGCTCCGTCCTGGGACAGACGGAAGGACCTC
CTGAGATGGGGAGGGGGGCGGCCGCGCCTGGGCCCGCCGGTGGCAGGGCTCTGGAACCTT
CCAGGTCACGCGCCCCCTGGTGGTCTGTGAGAAAAA
|
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207-396, gnl|bosTau2|chr19 (45293059-45293248) |
|
207-396, gnl|canFam2|chr9 (3485656-3485444) |
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207-396, gnl|danRer3|chrUn (153042413-153042599) |
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207-396, gnl|fr1|chrUn (127533832-127534019) |
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207-396, gnl|hg17|chr17 (77281653-77281874) |
|
207-396, gnl|Hg17|chr17 (77281676-77281865) |
|
207-396, gnl|loxAfr1|scaffold_98688 (3931-4146) |
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207-396, gnl|mm7|chr11 (120594271-120594483) |
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207-396, gnl|Mm7|chr11 (120594286-120594474) |
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207-396, gnl|monDom2|scaffold_18 (14507419-14507634) |
|
207-396, gnl|oryCun1|scaffold_76467 (527-316) |
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207-396, gnl|panTro1|chr19 (81018019-81018240) |
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207-396, gnl|rheMac2|chr16 (77179225-77179446) |
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207-396, gnl|rn3|chr10 (109885433-109885644) |
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207-396, gnl|tetNig1|chr3 (10842983-10843170) |
| |
|
612-965, gnl|bosTau2|chr19 (45295732-45296076) |
|
612-965, gnl|Hg17|chr17 (77284555-77284903) |
|
612-965, gnl|Mm7|chr11 (120597359-120597689) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
207-396, gnl|bosTau2|chr19 (45293059-45293248) |
|
207-396, gnl|canFam2|chr9 (3485656-3485444) |
|
207-396, gnl|danRer3|chrUn (153042413-153042599) |
|
207-396, gnl|fr1|chrUn (127533832-127534019) |
|
207-396, gnl|hg17|chr17 (77281653-77281874) |
|
207-396, gnl|Hg17|chr17 (77281676-77281865) |
|
207-396, gnl|loxAfr1|scaffold_98688 (3931-4146) |
|
207-396, gnl|mm7|chr11 (120594271-120594483) |
|
207-396, gnl|Mm7|chr11 (120594286-120594474) |
|
207-396, gnl|monDom2|scaffold_18 (14507419-14507634) |
|
207-396, gnl|oryCun1|scaffold_76467 (527-316) |
|
207-396, gnl|panTro1|chr19 (81018019-81018240) |
|
207-396, gnl|rheMac2|chr16 (77179225-77179446) |
|
207-396, gnl|rn3|chr10 (109885433-109885644) |
|
207-396, gnl|tetNig1|chr3 (10842983-10843170) |
| |
|
612-965, gnl|bosTau2|chr19 (45295732-45296076) |
|
612-965, gnl|Hg17|chr17 (77284555-77284903) |
|
612-965, gnl|Mm7|chr11 (120597359-120597689) |
|
pla (0.267344) |
|
mas (0.210305) |
|
eje (0.197668) |
|
nep (0.183925) |
|
nje (0.16592) |
|
nco (0.161734) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
pty (0.142714) |
|
eep (0.122564) |
|
clu (0.119646) |
|
jca (0.11396) |
|
jej (0.0989218) |
|
pla (0.267344) |
|
mas (0.210305) |
|
eje (0.197668) |
|
nep (0.183925) |
|
nje (0.16592) |
|
nco (0.161734) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
pty (0.142714) |
|
eep (0.122564) |
|
clu (0.119646) |
|
jca (0.11396) |
|
jej (0.0989218) |
