Ss1.1-LyN1-MLN01A050039.5
|
TGCAATTATGTCGGCGGCCTTGCTGCGGCGGGGCTTGGAGCTTTTGGGGGTTCCCGAAGC
CCCCGAGGCCGCGCCAGGCCAGACTAAGCCTAGCCAGGCTCCAAAGAAACGGACCCGGAA
GGCAAAGGCGACCCAGGCCCAGAAACTGCGGAACTCGGCCAAGGGAAAGGTTCCCAAGTC
GGCGCTGGCCGAGTTCCAGAAGCGAGAGCACCAAGGTTACCTTGGAGTGAACCTGAGGTT
TATGACCAGCGCAAGAAGCACAGTGTCTGAATCCGTCACCAGGCAGATTGTGCGTCAGAA
CCGGGGCCGCAAGGCCTGTGACCGGCCTGTAACCAAAAAGAAGAAGAAGAAGAAGGCCGA
GGGCACGGTGTTCACCGAGGAAGACTTCCAGAAGTTCCAGCAGGAGTATTTCGGCAGCTA
GGCTCCCAGAGGGCCCGCCTTTCTCCCCTCACCACAGCCTCTGCGGCTCAGGGCCTGCAG
GGGAGGCGGGAGCGGCAGGGCTGGAGCTGGCCTGGACCTGTGCCCACATCCCAACGTTGC
TCCGGAGGGTCACCTCCTTGCTGGGAAGGAACATTCCTGACTGTTCTGTTTGCTTTGGCC
CAAGGAGGGCCTCTGGGCTGTTTGCCGTGGAGGGCCCGTCCCTGGGCCCCCAGGGACCAC
ACCTCTGCCAGGAGGCGGGCTAGATGGGCTTCCAGTTTCTAATAAATGTGGCCCAGCGGC
TGTGAGCGCTGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCAATTATGTCGGCGGCCTTGCTGCGGCGGGGCTTGGAGCTTTTGGGGGTTCCCGAAGC
CCCCGAGGCCGCGCCAGGCCAGACTAAGCCTAGCCAGGCTCCAAAGAAACGGACCCGGAA
GGCAAAGGCGACCCAGGCCCAGAAACTGCGGAACTCGGCCAAGGGAAAGGTTCCCAAGTC
GGCGCTGGCCGAGTTCCAGAAGCGAGAGCACCAAGGTTACCTTGGAGTGAACCTGAGGTT
TATGACCAGCGCAAGAAGCACAGTGTCTGAATCCGTCACCAGGCAGATTGTGCGTCAGAA
CCGGGGCCGCAAGGCCTGTGACCGGCCTGTAACCAAAAAGAAGAAGAAGAAGAAGGCCGA
GGGCACGGTGTTCACCGAGGAAGACTTCCAGAAGTTCCAGCAGGAGTATTTCGGCAGCTA
GGCTCCCAGAGGGCCCGCCTTTCTCCCCTCACCACAGCCTCTGCGGCTCAGGGCCTGCAG
GGGAGGCGGGAGCGGCAGGGCTGGAGCTGGCCTGGACCTGTGCCCACATCCCAACGTTGC
TCCGGAGGGTCACCTCCTTGCTGGGAAGGAACATTCCTGACTGTTCTGTTTGCTTTGGCC
CAAGGAGGGCCTCTGGGCTGTTTGCCGTGGAGGGCCCGTCCCTGGGCCCCCAGGGACCAC
ACCTCTGCCAGGAGGCGGGCTAGATGGGCTTCCAGTTTCTAATAAATGTGGCCCAGCGGC
TGTGAGCGCTGC
|
|
gi|61861866|ref|XP_585999.1| |
Protein identifier
|
gi|61861866|ref|XP_585999.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
58-193, gnl|bosTau2|chr5 (11466-11601) |
|
58-193, gnl|canFam2|chr10 (28586091-28585915) |
|
58-193, gnl|echTel1|scaffold_305675 (7377-7192) |
|
58-193, gnl|galGal2|chr1 (47305788-47305655) |
|
58-193, gnl|hg17|chr22 (38252873-38253063) |
|
58-193, gnl|Hg17|chr22 (38253030-38252895) |
|
58-193, gnl|loxAfr1|scaffold_63174 (4618-4436) |
|
58-193, gnl|mm7|chr15 (80348439-80348630) |
|
58-193, gnl|Mm7|chr15 (80348600-80348459) |
|
58-193, gnl|monDom2|scaffold_133 (1682360-1682190) |
|
58-193, gnl|panTro1|chr23 (38501430-38501620) |
|
58-193, gnl|rheMac2|chr10 (83458954-83459144) |
|
58-193, gnl|rn3|chr7 (118579185-118579379) |
| |
|
284-724, gnl|bosTau2|chr5 (14364-14817) |
|
284-724, gnl|Hg17|chr22 (38250131-38249592) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
58-193, gnl|bosTau2|chr5 (11466-11601) |
|
58-193, gnl|canFam2|chr10 (28586091-28585915) |
|
58-193, gnl|echTel1|scaffold_305675 (7377-7192) |
|
58-193, gnl|galGal2|chr1 (47305788-47305655) |
|
58-193, gnl|hg17|chr22 (38252873-38253063) |
|
58-193, gnl|Hg17|chr22 (38253030-38252895) |
|
58-193, gnl|loxAfr1|scaffold_63174 (4618-4436) |
|
58-193, gnl|mm7|chr15 (80348439-80348630) |
|
58-193, gnl|Mm7|chr15 (80348600-80348459) |
|
58-193, gnl|monDom2|scaffold_133 (1682360-1682190) |
|
58-193, gnl|panTro1|chr23 (38501430-38501620) |
|
58-193, gnl|rheMac2|chr10 (83458954-83459144) |
|
58-193, gnl|rn3|chr7 (118579185-118579379) |
| |
|
284-724, gnl|bosTau2|chr5 (14364-14817) |
|
284-724, gnl|Hg17|chr22 (38250131-38249592) |
|
pty (0.285429) |
|
nca (0.273748) |
|
ece (0.229305) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
duo (0.172801) |
|
cli (0.152812) |
|
hlv (0.139256) |
|
cov (0.132153) |
|
cly (0.120642) |
|
eje (0.0988338) |
|
pty (0.285429) |
|
nca (0.273748) |
|
ece (0.229305) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
duo (0.172801) |
|
cli (0.152812) |
|
hlv (0.139256) |
|
cov (0.132153) |
|
cly (0.120642) |
|
eje (0.0988338) |
