Ss1.1-LyN1-MLN01A060092.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTCACTAGGGCCCCAGGCCGCAGGACTGAAACCATGCTGGTGGCGGCGGCCGCCGAGCG GAACAAGGAGCCCATCCTTCACGTGCTGCGGCAGTATGTGGACCCGACTCAGCGCGGCGT CCGCGTGCTCGAGGTGGCCTCGGGCTCCGGCCAGCATGCAGCCCACTTCGCGCGGGCTTT CCCGCACGCCGAGTGGCAGCCGTCAGACGTGGATCAGCGCTGCCTGGACAGTATCTCGGC CACGGCTCTGGCCCAGGGCCTAACCAACGTGAAGGCCCCGCTGTACCTGGACGTGACCTG GGATTGGGAGCAGTGGGGTGGGATCCTGCCGCGATCACTGGACCTGCTGCTCTGCATCAA CATGATCCACATCAGCCCCCTGAGCTGCACCGAGGGCCTCTTCAGAGCAGCAGGACACCT GCTTAAACCCAAGGCTGTGCTCATCACCTACGGGCCCTTCGCCGTCAACGGAAAGATTTC TCCCCAGAGTAATGTGGACTTTGATCTGAGCCTCAGATGCAGGAACCCGGAGTGGGGGCT GCGGGACACAGCCCTGCTGGCAGACCTGGGCCAGGCCAGCAGCCTGCTCCTGGAGAGGAT GGTGGACATGCCAGCCAACAACAAGTGTCTGATCTTCCGAAAAGAGTAACCCCTCCTCCT CCGGCATGCCCACGTCCCTGGGACAGAGCCAGACCACCAGCCTCTGCCTCCCCGGGCCAC CCAGATGGGGGATTCTTGGCCAGTGGCCACAGGGCTGCTGAGAGCCTGGGAATAAAGTGC TTTCTGCTGTCCCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTCACTAGGGCCCCAGGCCGCAGGACTGAAACCATGCTGGTGGCGGCGGCCGCCGAGCG GAACAAGGAGCCCATCCTTCACGTGCTGCGGCAGTATGTGGACCCGACTCAGCGCGGCGT CCGCGTGCTCGAGGTGGCCTCGGGCTCCGGCCAGCATGCAGCCCACTTCGCGCGGGCTTT CCCGCACGCCGAGTGGCAGCCGTCAGACGTGGATCAGCGCTGCCTGGACAGTATCTCGGC CACGGCTCTGGCCCAGGGCCTAACCAACGTGAAGGCCCCGCTGTACCTGGACGTGACCTG GGATTGGGAGCAGTGGGGTGGGATCCTGCCGCGATCACTGGACCTGCTGCTCTGCATCAA CATGATCCACATCAGCCCCCTGAGCTGCACCGAGGGCCTCTTCAGAGCAGCAGGACACCT GCTTAAACCCAAGGCTGTGCTCATCACCTACGGGCCCTTCGCCGTCAACGGAAAGATTTC TCCCCAGAGTAATGTGGACTTTGATCTGAGCCTCAGATGCAGGAACCCGGAGTGGGGGCT GCGGGACACAGCCCTGCTGGCAGACCTGGGCCAGGCCAGCAGCCTGCTCCTGGAGAGGAT GGTGGACATGCCAGCCAACAACAAGTGTCTGATCTTCCGAAAAGAGTAACCCCTCCTCCT CCGGCATGCCCACGTCCCTGGGACAGAGCCAGACCACCAGCCTCTGCCTCCCCGGGCCAC CCAGATGGGGGATTCTTGGCCAGTGGCCACAGGGCTGCTGAGAGCCTGGGAATAAAGTGC TTTCTGCTGTCCCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 24-231, gnl|bosTau2|chr25 (1269088-1269295) | |
| 24-231, gnl|canFam2|chr6 (42973383-42973165) | |
| 24-231, gnl|dasNov1|scaffold_79367 (4854-5072) | |
| 24-231, gnl|echTel1|scaffold_183769 (588-371) | |
| 24-231, gnl|fr1|chrUn (164506385-164506582) | |
| 24-231, gnl|galGal2|chr12 (9146415-9146635) | |
| 24-231, gnl|hg17|chr16 (626094-626312) | |
| 24-231, gnl|Hg17|chr16 (626308-626095) | |
| 24-231, gnl|mm7|chr17 (24058969-24058751) | |
| 24-231, gnl|Mm7|chr17 (24058764-24058966) | |
| 24-231, gnl|monDom2|scaffold_49 (9582567-9582785) | |
| 24-231, gnl|oryCun1|scaffold_125879 (3566-3792) | |
| 24-231, gnl|rheMac2|chr20 (624517-624735) | |
| 24-231, gnl|rn3|chr10 (15140190-15139972) | |
| 24-231, gnl|tetNig1|chr18 (4944782-4944584) | |
| 24-231, gnl|xenTro1|scaffold_12 (3699819-3699600) | |
| 601-794, gnl|bosTau2|chr25 (1270498-1270696) | |
| 601-794, gnl|canFam2|chr6 (42974761-42974550) | |
| 601-794, gnl|dasNov1|scaffold_79367 (3124-3321) | |
| 601-794, gnl|galGal2|chrUn (13398246-13398346) | |
| 601-794, gnl|hg17|chr16 (624394-624594) | |
| 601-794, gnl|Hg17|chr16 (624646-624430) | |
| 601-794, gnl|mm7|chr17 (24060425-24060238) | |
| 601-794, gnl|Mm7|chr17 (24060189-24060384) | |
| 601-794, gnl|monDom2|scaffold_49 (9577331-9577633) | |
| 601-794, gnl|rheMac2|chr20 (622920-623117) | |
| 601-794, gnl|rn3|chr10 (15141499-15141305) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 24-231, gnl|bosTau2|chr25 (1269088-1269295) | |
| 24-231, gnl|canFam2|chr6 (42973383-42973165) | |
| 24-231, gnl|dasNov1|scaffold_79367 (4854-5072) | |
| 24-231, gnl|echTel1|scaffold_183769 (588-371) | |
| 24-231, gnl|fr1|chrUn (164506385-164506582) | |
| 24-231, gnl|galGal2|chr12 (9146415-9146635) | |
| 24-231, gnl|hg17|chr16 (626094-626312) | |
| 24-231, gnl|Hg17|chr16 (626308-626095) | |
| 24-231, gnl|mm7|chr17 (24058969-24058751) | |
| 24-231, gnl|Mm7|chr17 (24058764-24058966) | |
| 24-231, gnl|monDom2|scaffold_49 (9582567-9582785) | |
| 24-231, gnl|oryCun1|scaffold_125879 (3566-3792) | |
| 24-231, gnl|rheMac2|chr20 (624517-624735) | |
| 24-231, gnl|rn3|chr10 (15140190-15139972) | |
| 24-231, gnl|tetNig1|chr18 (4944782-4944584) | |
| 24-231, gnl|xenTro1|scaffold_12 (3699819-3699600) | |
| 601-794, gnl|bosTau2|chr25 (1270498-1270696) | |
| 601-794, gnl|canFam2|chr6 (42974761-42974550) | |
| 601-794, gnl|dasNov1|scaffold_79367 (3124-3321) | |
| 601-794, gnl|galGal2|chrUn (13398246-13398346) | |
| 601-794, gnl|hg17|chr16 (624394-624594) | |
| 601-794, gnl|Hg17|chr16 (624646-624430) | |
| 601-794, gnl|mm7|chr17 (24060425-24060238) | |
| 601-794, gnl|Mm7|chr17 (24060189-24060384) | |
| 601-794, gnl|monDom2|scaffold_49 (9577331-9577633) | |
| 601-794, gnl|rheMac2|chr20 (622920-623117) | |
| 601-794, gnl|rn3|chr10 (15141499-15141305) |
| Expressed library(ies): 10 entry(ies) | More info |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
| nep (0.36785) | |
| ton (0.351) | |
| nbm (0.297974) | |
| cov (0.264306) | |
| ece (0.229305) | |
| fbs (0.175346) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| cly (0.120642) | |
| jca (0.11396) |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.36785) | |
| ton (0.351) | |
| nbm (0.297974) | |
| cov (0.264306) | |
| ece (0.229305) | |
| fbs (0.175346) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| cly (0.120642) | |
| jca (0.11396) |