Ss1.1-LyN1-MLN01A070057.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTGATGAAGTCCTGTCTGGAGGGCTTCAAGGACAACTGTGAGTTTCACTGGGTAGCGT AGCTGTCCCGCAGAGAATTTAGAATAAATGACACTCTAAGGGAAAAAAAGAGCAAAATAG CACTAACAAGTGTCTGTTTTTGTTATTATCATTTCCTAATTGTATTAGTAGGTGTGCAAT TTCATTGGATATTCTTTTTTTTTTTTTTTTCAATTGTCTTTGTACCTATGATTGAAAACG GTAGTGGGTCTATGACTTTTGAGGAGAGGGAGAACCGGAGATTACAGGAGGCCAGCATGA GGTTGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAACCAGCAAAATTGCTCTGC GGAATGACCTGGATCAGGCAGAGGACAAGGCAGATGTGTTGAATAAGGAGCTCCTCTTGA CCAAACAGAGGCTGGTGGAAACTGAAGAAGAGAAGAGGAAGCAAGAGGAGGAGACAGCTC AGCTAAAAGAAGTCTTTAGGAAACAGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTA CGGCCATCATTGCTGAGTATAAACAGATCTGTTCCCAGTTGAGTACCAGACTCGAGAAAC AGCAGGCAGCCAGCAAGGAGGAGCTGGAAGTGGTCAAGGGTAAAATGATGGCGTGTAAAC ACTGCAGTGACATTTTCAGCAAGGAAGGTGCTCTGAAAGTAGCAGCCATCAGCAGAGAGG ACCAGGGAATTGAATCGGATGATGAGAAGGACTCTCTTAAGAAGCAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTGATGAAGTCCTGTCTGGAGGGCTTCAAGGACAACTGTGAGTTTCACTGGGTAGCGT AGCTGTCCCGCAGAGAATTTAGAATAAATGACACTCTAAGGGAAAAAAAGAGCAAAATAG CACTAACAAGTGTCTGTTTTTGTTATTATCATTTCCTAATTGTATTAGTAGGTGTGCAAT TTCATTGGATATTCTTTTTTTTTTTTTTTTCAATTGTCTTTGTACCTATGATTGAAAACG GTAGTGGGTCTATGACTTTTGAGGAGAGGGAGAACCGGAGATTACAGGAGGCCAGCATGA GGTTGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAACCAGCAAAATTGCTCTGC GGAATGACCTGGATCAGGCAGAGGACAAGGCAGATGTGTTGAATAAGGAGCTCCTCTTGA CCAAACAGAGGCTGGTGGAAACTGAAGAAGAGAAGAGGAAGCAAGAGGAGGAGACAGCTC AGCTAAAAGAAGTCTTTAGGAAACAGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTA CGGCCATCATTGCTGAGTATAAACAGATCTGTTCCCAGTTGAGTACCAGACTCGAGAAAC AGCAGGCAGCCAGCAAGGAGGAGCTGGAAGTGGTCAAGGGTAAAATGATGGCGTGTAAAC ACTGCAGTGACATTTTCAGCAAGGAAGGTGCTCTGAAAGTAGCAGCCATCAGCAGAGAGG ACCAGGGAATTGAATCGGATGATGAGAAGGACTCTCTTAAGAAGCAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 257-376, gnl|bosTau2|chr16 (44616060-44616179) | |
| 257-376, gnl|canFam2|chr7 (27382061-27381981) | |
| 257-376, gnl|danRer3|chr22 (25820857-25820777) | |
| 257-376, gnl|dasNov1|scaffold_4312 (53763-53683) | |
| 257-376, gnl|echTel1|scaffold_310574 (111135-111211) | |
| 257-376, gnl|fr1|chrUn (314658768-314658848) | |
| 257-376, gnl|galGal2|chr8 (7124741-7124661) | |
| 257-376, gnl|hg17|chr1 (171670062-171670142) | |
| 257-376, gnl|Hg17|chr1 (171670064-171670180) | |
| 257-376, gnl|loxAfr1|scaffold_3551 (65926-65850) | |
| 257-376, gnl|mm7|chr1 (160209663-160209583) | |
| 257-376, gnl|Mm7|chr1 (160209662-160209543) | |
| 257-376, gnl|monDom2|scaffold_16 (26165339-26165417) | |
| 257-376, gnl|oryCun1|scaffold_87740 (8199-8279) | |
| 257-376, gnl|panTro1|chr1 (154065711-154065791) | |
| 257-376, gnl|rheMac2|chr1 (204578939-204579019) | |
| 257-376, gnl|rn3|chr13 (75691087-75691007) | |
| 257-376, gnl|tetNig1|chrUn_random (90961457-90961530) | |
| 257-376, gnl|xenTro1|scaffold_197 (1305854-1305778) | |
| 265-374, gnl|bosTau2|chr11 (75645148-75645257) | |
| 265-374, gnl|canFam2|chr9 (63050110-63049990) | |
| 265-374, gnl|danRer3|chr22 (25820852-25820740) | |
| 265-374, gnl|dasNov1|scaffold_21354 (42996-43116) | |
| 265-374, gnl|echTel1|scaffold_292934 (46476-46596) | |
| 265-374, gnl|fr1|chrUn (314658773-314658892) | |
| 265-374, gnl|galGal2|chr17 (1561743-1561624) | |
| 265-374, gnl|hg17|chr9 (122932104-122932224) | |
| 265-374, gnl|Hg17|chr9 (122932106-122932215) | |
| 265-374, gnl|loxAfr1|scaffold_3551 (65925-65805) | |
| 265-374, gnl|mm7|chr2 (37563503-37563623) | |
| 265-374, gnl|Mm7|chr2 (37563505-37563614) | |
| 265-374, gnl|monDom2|scaffold_38 (16625174-16625294) | |
| 265-374, gnl|oryCun1|scaffold_181691 (2380-2500) | |
| 265-374, gnl|panTro1|chr11 (107637439-107637559) | |
| 265-374, gnl|rheMac2|chr15 (12638214-12638094) | |
| 265-374, gnl|rn3|chr3 (17208807-17208927) | |
| 265-374, gnl|tetNig1|chr4 (1042623-1042505) | |
| 265-374, gnl|xenTro1|scaffold_257 (1039297-1039417) | |
| 637-766, gnl|bosTau2|chr16 (44633324-44633453) | |
| 637-766, gnl|canFam2|chr7 (27364752-27364531) | |
| 637-766, gnl|danRer3|chr22 (25817224-25817017) | |
| 637-766, gnl|dasNov1|scaffold_4312 (38980-38758) | |
| 637-766, gnl|echTel1|scaffold_163928 (5565-5343) | |
| 637-766, gnl|fr1|chrUn (298867360-298867567) | |
| 637-766, gnl|galGal2|chr8 (7119336-7119127) | |
| 637-766, gnl|hg17|chr1 (171689431-171689653) | |
| 637-766, gnl|Hg17|chr1 (171689433-171689562) | |
| 637-766, gnl|loxAfr1|scaffold_978 (48275-48053) | |
| 637-766, gnl|mm7|chr1 (160188771-160188549) | |
| 637-766, gnl|Mm7|chr1 (160188767-160188638) | |
| 637-766, gnl|monDom2|scaffold_16 (26186591-26186813) | |
| 637-766, gnl|oryCun1|scaffold_174972 (9038-8816) | |
| 637-766, gnl|panTro1|chr1 (154085504-154085726) | |
| 637-766, gnl|rheMac2|chr1 (204598664-204598886) | |
| 637-766, gnl|rn3|chr13 (75672308-75672086) | |
| 637-766, gnl|tetNig1|chrUn_random (90962526-90962731) | |
| 637-766, gnl|xenTro1|scaffold_197 (1303944-1303723) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 257-376, gnl|bosTau2|chr16 (44616060-44616179) | |
| 257-376, gnl|canFam2|chr7 (27382061-27381981) | |
| 257-376, gnl|danRer3|chr22 (25820857-25820777) | |
| 257-376, gnl|dasNov1|scaffold_4312 (53763-53683) | |
| 257-376, gnl|echTel1|scaffold_310574 (111135-111211) | |
| 257-376, gnl|fr1|chrUn (314658768-314658848) | |
| 257-376, gnl|galGal2|chr8 (7124741-7124661) | |
| 257-376, gnl|hg17|chr1 (171670062-171670142) | |
| 257-376, gnl|Hg17|chr1 (171670064-171670180) | |
| 257-376, gnl|loxAfr1|scaffold_3551 (65926-65850) | |
| 257-376, gnl|mm7|chr1 (160209663-160209583) | |
| 257-376, gnl|Mm7|chr1 (160209662-160209543) | |
| 257-376, gnl|monDom2|scaffold_16 (26165339-26165417) | |
| 257-376, gnl|oryCun1|scaffold_87740 (8199-8279) | |
| 257-376, gnl|panTro1|chr1 (154065711-154065791) | |
| 257-376, gnl|rheMac2|chr1 (204578939-204579019) | |
| 257-376, gnl|rn3|chr13 (75691087-75691007) | |
| 257-376, gnl|tetNig1|chrUn_random (90961457-90961530) | |
| 257-376, gnl|xenTro1|scaffold_197 (1305854-1305778) | |
| 265-374, gnl|bosTau2|chr11 (75645148-75645257) | |
| 265-374, gnl|canFam2|chr9 (63050110-63049990) | |
| 265-374, gnl|danRer3|chr22 (25820852-25820740) | |
| 265-374, gnl|dasNov1|scaffold_21354 (42996-43116) | |
| 265-374, gnl|echTel1|scaffold_292934 (46476-46596) | |
| 265-374, gnl|fr1|chrUn (314658773-314658892) | |
| 265-374, gnl|galGal2|chr17 (1561743-1561624) | |
| 265-374, gnl|hg17|chr9 (122932104-122932224) | |
| 265-374, gnl|Hg17|chr9 (122932106-122932215) | |
| 265-374, gnl|loxAfr1|scaffold_3551 (65925-65805) | |
| 265-374, gnl|mm7|chr2 (37563503-37563623) | |
| 265-374, gnl|Mm7|chr2 (37563505-37563614) | |
| 265-374, gnl|monDom2|scaffold_38 (16625174-16625294) | |
| 265-374, gnl|oryCun1|scaffold_181691 (2380-2500) | |
| 265-374, gnl|panTro1|chr11 (107637439-107637559) | |
| 265-374, gnl|rheMac2|chr15 (12638214-12638094) | |
| 265-374, gnl|rn3|chr3 (17208807-17208927) | |
| 265-374, gnl|tetNig1|chr4 (1042623-1042505) | |
| 265-374, gnl|xenTro1|scaffold_257 (1039297-1039417) | |
| 637-766, gnl|bosTau2|chr16 (44633324-44633453) | |
| 637-766, gnl|canFam2|chr7 (27364752-27364531) | |
| 637-766, gnl|danRer3|chr22 (25817224-25817017) | |
| 637-766, gnl|dasNov1|scaffold_4312 (38980-38758) | |
| 637-766, gnl|echTel1|scaffold_163928 (5565-5343) | |
| 637-766, gnl|fr1|chrUn (298867360-298867567) | |
| 637-766, gnl|galGal2|chr8 (7119336-7119127) | |
| 637-766, gnl|hg17|chr1 (171689431-171689653) | |
| 637-766, gnl|Hg17|chr1 (171689433-171689562) | |
| 637-766, gnl|loxAfr1|scaffold_978 (48275-48053) | |
| 637-766, gnl|mm7|chr1 (160188771-160188549) | |
| 637-766, gnl|Mm7|chr1 (160188767-160188638) | |
| 637-766, gnl|monDom2|scaffold_16 (26186591-26186813) | |
| 637-766, gnl|oryCun1|scaffold_174972 (9038-8816) | |
| 637-766, gnl|panTro1|chr1 (154085504-154085726) | |
| 637-766, gnl|rheMac2|chr1 (204598664-204598886) | |
| 637-766, gnl|rn3|chr13 (75672308-75672086) | |
| 637-766, gnl|tetNig1|chrUn_random (90962526-90962731) | |
| 637-766, gnl|xenTro1|scaffold_197 (1303944-1303723) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mga (0.160205) | |
| liv (0.146284) |