Non-Coding RNA Search

Ss1.1-LyN1-MLN01A070058.5

Sequence:


               
               AGCTTCATACTAGTTTTAGGTTTGGAATCTTCCTGTTTGTGAACAGTTTGTTTCTCCCTC
AGTAAAACATTTCTATCCGGTAAAGCTCTCTAAATTTTCTTTTAACCGTTGTTGTCAGAA
GTAGAATGGGAAGAAGAGCCCTGAAGAAAACCCCAAAGCTGGATTTCTTTCCGCTGCGGC
GCCACGGGAACTCCTACGCTCAGAGATTTCTGGTCGATCTGGTATCCCAGCTCTGTTGCC
TTTGTCTTCTGCTCTCGGATTTCGTTAAGGCACCTTTATGGAAGCTTCAAAAGGGCCTCA
CCCACGGCATATGGAGATTCCCAGAATGGGAATCTATTCAGAGCTGTACTGCAGTCAAAG
AAATGCCAGATCAGAACCAGATCTGTGAAATTACATCACAGTTCATGGCAGTGCTTGATC
TTAACCCACTGAGAGAGACCAAGGATCGAACCTGAAACCTCATGGTTCCTAGTCGGATGG
ATGATGGATCTAGGGCAGGTAAGTAGCAACCTTGTCATGGGGAGCGGTCAAATATTTGAT
CACCTAATGCTGTCTACCTAAGGATTGATGAGCAAAGGAAGAAAATGACTATATACAATA
TTAATAAGGAACAATGACCTACTGTATAGCATGGAGAAACCTAGTCAATACTCTGCGATG
GCCTATGTGGGACGAGAATCTGAAAAAGAATGGATATATGTATGTGTATGACTGATTCGC
TTTGCTGTACACCGGAAGCTAACACAGCATTGTAAGTCAGCTATGCTGGAATGAAACAGT
TTTACTGTATTGGAATGGAATAAGTGGAAATACACTGTTCTGATGAAAAACTGGGAAGAA
AACCAAAACTAAGTTAAAGTGCACCAAAATGTATCCTTTTGATTGAAAAACATAGTGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTTCATACTAGTTTTAGGTTTGGAATCTTCCTGTTTGTGAACAGTTTGTTTCTCCCTC
AGTAAAACATTTCTATCCGGTAAAGCTCTCTAAATTTTCTTTTAACCGTTGTTGTCAGAA
GTAGAATGGGAAGAAGAGCCCTGAAGAAAACCCCAAAGCTGGATTTCTTTCCGCTGCGGC
GCCACGGGAACTCCTACGCTCAGAGATTTCTGGTCGATCTGGTATCCCAGCTCTGTTGCC
TTTGTCTTCTGCTCTCGGATTTCGTTAAGGCACCTTTATGGAAGCTTCAAAAGGGCCTCA
CCCACGGCATATGGAGATTCCCAGAATGGGAATCTATTCAGAGCTGTACTGCAGTCAAAG
AAATGCCAGATCAGAACCAGATCTGTGAAATTACATCACAGTTCATGGCAGTGCTTGATC
TTAACCCACTGAGAGAGACCAAGGATCGAACCTGAAACCTCATGGTTCCTAGTCGGATGG
ATGATGGATCTAGGGCAGGTAAGTAGCAACCTTGTCATGGGGAGCGGTCAAATATTTGAT
CACCTAATGCTGTCTACCTAAGGATTGATGAGCAAAGGAAGAAAATGACTATATACAATA
TTAATAAGGAACAATGACCTACTGTATAGCATGGAGAAACCTAGTCAATACTCTGCGATG
GCCTATGTGGGACGAGAATCTGAAAAAGAATGGATATATGTATGTGTATGACTGATTCGC
TTTGCTGTACACCGGAAGCTAACACAGCATTGTAAGTCAGCTATGCTGGAATGAAACAGT
TTTACTGTATTGGAATGGAATAAGTGGAAATACACTGTTCTGATGAAAAACTGGGAAGAA
AACCAAAACTAAGTTAAAGTGCACCAAAATGTATCCTTTTGATTGAAAAACATAGTGGGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               588-784, gnl|bosTau2|chr5 (71445430-71445626)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               588-784, gnl|bosTau2|chr5 (71445430-71445626)

Expressed library(ies): 8 entry(ies)

More info

Expressed library(ies): 8 entry(ies)

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               aor (0.390549)
               

               
               gul (0.355177)
               

               
               sag (0.182715)
               

               
               fco (0.157208)
               

               
               ski (0.146735)
               

               
               liv (0.146284)
               

               
               csk (0.140746)
               

               
               med (0.116252)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.390549)
               

               
               gul (0.355177)
               

               
               sag (0.182715)
               

               
               fco (0.157208)
               

               
               ski (0.146735)
               

               
               liv (0.146284)
               

               
               csk (0.140746)
               

               
               med (0.116252)

	aor (0.390549)
	gul (0.355177)
	sag (0.182715)
	fco (0.157208)
	ski (0.146735)
	liv (0.146284)
	csk (0.140746)
	med (0.116252)