Non-Coding RNA Search

Ss1.1-LyN1-MLN01A070064.5

Sequence:


               
               TGTATTTATTGTTTTGGGGATGATTTTAGAGAGCAGATGGTGGTGGAAATGTTTTTATTC
TATCAGGAGTACTGTGATTGAGAATAACGTAAGTGACCTAATTTAGACTGGATGTTTAAG
AAAGGTACATGT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CATATGCCATGGGTGTGGCCCTAAAAAGACAAAAGGAAAAAAAAAAAA
AAGTACATGTAGGGAAATAATAAATAAGCTGAGAAATGACAAGTGAACAAGAGTTAGTCT
CAGGATTTCAGGGCAGAAAGAAAATTGTGTATTGAAGCCCTGAGATGCCATGAGCTGTGG
AGTAGGTTGCAAGACGTGGCTTAGATCCTGTGTTGCTGTGGCTGTGGTGTAGGTCAATGG
CTGCAGCTCTGATTTGACCCCTAGCCTGGGAACCTCCATATGCTGCAGGTTCGGCCCTAA
AAAGATTAAAAAAAAAAAAAAAGTCTTGAGACCTCAAAACTGTGTACCCGAACCAATTAG
AAAAAGGCCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTATTTATTGTTTTGGGGATGATTTTAGAGAGCAGATGGTGGTGGAAATGTTTTTATTC
TATCAGGAGTACTGTGATTGAGAATAACGTAAGTGACCTAATTTAGACTGGATGTTTAAG
AAAGGTACATGT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CATATGCCATGGGTGTGGCCCTAAAAAGACAAAAGGAAAAAAAAAAAA
AAGTACATGTAGGGAAATAATAAATAAGCTGAGAAATGACAAGTGAACAAGAGTTAGTCT
CAGGATTTCAGGGCAGAAAGAAAATTGTGTATTGAAGCCCTGAGATGCCATGAGCTGTGG
AGTAGGTTGCAAGACGTGGCTTAGATCCTGTGTTGCTGTGGCTGTGGTGTAGGTCAATGG
CTGCAGCTCTGATTTGACCCCTAGCCTGGGAACCTCCATATGCTGCAGGTTCGGCCCTAA
AAAGATTAAAAAAAAAAAAAAAGTCTTGAGACCTCAAAACTGTGTACCCGAACCAATTAG
AAAAAGGCCAAC

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               5-132, gnl|bosTau2|chr18 (6293214-6293085)
               

               
               5-132, gnl|canFam2|chr25 (31330535-31330351)
               

               
               5-132, gnl|hg17|chr8 (29116804-29116998)
               

               
               5-132, gnl|Hg17|chr8 (29116971-29116845)
               

               
               5-132, gnl|mm7|chr14 (59562395-59562197)
               

               
               5-132, gnl|panTro1|chr7 (30175583-30175777)
               

               
               5-132, gnl|rheMac2|chr8 (29360198-29360365)
               

               
               5-132, gnl|rn3|chr15 (44074727-44074531)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-132, gnl|bosTau2|chr18 (6293214-6293085)
               

               
               5-132, gnl|canFam2|chr25 (31330535-31330351)
               

               
               5-132, gnl|hg17|chr8 (29116804-29116998)
               

               
               5-132, gnl|Hg17|chr8 (29116971-29116845)
               

               
               5-132, gnl|mm7|chr14 (59562395-59562197)
               

               
               5-132, gnl|panTro1|chr7 (30175583-30175777)
               

               
               5-132, gnl|rheMac2|chr8 (29360198-29360365)
               

               
               5-132, gnl|rn3|chr15 (44074727-44074531)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	5-132, gnl\|bosTau2\|chr18 (6293214-6293085)
	5-132, gnl\|canFam2\|chr25 (31330535-31330351)
	5-132, gnl\|hg17\|chr8 (29116804-29116998)
	5-132, gnl\|Hg17\|chr8 (29116971-29116845)
	5-132, gnl\|mm7\|chr14 (59562395-59562197)
	5-132, gnl\|panTro1\|chr7 (30175583-30175777)
	5-132, gnl\|rheMac2\|chr8 (29360198-29360365)
	5-132, gnl\|rn3\|chr15 (44074727-44074531)