Ss1.1-LyN1-MLN01A070097.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCAGGGAGGTAGGTTAGGCAAAACAGGAAGTCTGTGCTTTGGGGCTCAGGGTGAGGGC CAGGCTTCCCGAGGAAAGGAAAGTGAAAGCAAAGTGAAAGCATTGAACGGACTGTGCAGA GCTGAAGATGCTGCACCCGAGGGATTGATAGAGGCAGACTTTGTTGTCAGTGTTCCCAGA AAGGACAGAGGCAGTGAACATCTCATCAATAGCCATCTTAGGCGGGCCTGAGAAGATGGC AAGTGGAGGCAGCGACCTCAGCTGCAGAACTTTCACAGGCTACCAGAACCCAGAGGAACA GAGCTCAGATGAGCAGTTTTTTAATGAGCTGATTTTCAGGTTCTTCAGAGAAAATAAGGT GGACATTTCAAGTGTAATAACACAGCCCTTTCCTTTCCTTATGGGCCTCCGGGACCGGAG CTTCATCCCTGAGCAGATGTATGAACACTTTCTGGAAGCATGCAGAAATCTAGTCCCGGT GGAGAGAGTGATGTATGATGTTCTCAGTGAACTGGAGAAGAAATTTGACCGGACAGTTCT GGAAGCTCTATTCAGCAGCATTAACCTGAAGGCCTATCCTGACTTACATCAGATTTTCAG AGACTTCAAAAAAATGATTCTTGAAAACTTCAACTACCAAATCACGAATGAAGGAGAGAC AAAGGACATGATCAACTTACAGTTGGGCCGCGAACAAGTGCCCCTGGAACGTGCATCTCT CCAAATGAATAATATAAGAGGGTTAGAAGATACACCCAGATTACAGCCACGTGACAGACA AGGGGTCAGCAATGCCCTGTTGGAGACCAGTGCTGGAGAACAGACCCTGGAAACCTTGAG ATCCCCACAAAGATATTGGCCAGTGTCCTGCAACCCCGCAGCTCTACCACGTGGTAAAAG AGGAAAATCAGAAGAAACGCTCGGGTGGCTCCCTTATAATAAAGAAGTGACCTGTGATTC CAAAGCTCCTCAAATGACTCACCAGGGAGAATCCAAGGAGGGGCTCAGCCTATCACCAGC AAAGGGAGTAGAGGACAGCAGTACCTGTTGGGAGACCTGCAACGAAGAAGAGCCCCAGGA GGCCTCAAACTCCCCACCAAGACATGGCCCAGTATCTGACGAGCCAGAAGATTTCCAAAT GAATACAGAAGGAGATTTAGAAGAGTTTGCTTCTAGCCCACTCTCCTCTAAAGGACAAGG AGCAGAGCTACCAGCAAATGGAAGTGAGAAGTGTTCCTGTGTTATGTGCTTTTCAAAAGA TGTGCCAGTAGATCCAGAAGCAAGGAACCAAGCTAGTGGCGTGATGGCTCTTGTGGATAG TAGAAACACCTCCACTTTGGGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCAGGGAGGTAGGTTAGGCAAAACAGGAAGTCTGTGCTTTGGGGCTCAGGGTGAGGGC CAGGCTTCCCGAGGAAAGGAAAGTGAAAGCAAAGTGAAAGCATTGAACGGACTGTGCAGA GCTGAAGATGCTGCACCCGAGGGATTGATAGAGGCAGACTTTGTTGTCAGTGTTCCCAGA AAGGACAGAGGCAGTGAACATCTCATCAATAGCCATCTTAGGCGGGCCTGAGAAGATGGC AAGTGGAGGCAGCGACCTCAGCTGCAGAACTTTCACAGGCTACCAGAACCCAGAGGAACA GAGCTCAGATGAGCAGTTTTTTAATGAGCTGATTTTCAGGTTCTTCAGAGAAAATAAGGT GGACATTTCAAGTGTAATAACACAGCCCTTTCCTTTCCTTATGGGCCTCCGGGACCGGAG CTTCATCCCTGAGCAGATGTATGAACACTTTCTGGAAGCATGCAGAAATCTAGTCCCGGT GGAGAGAGTGATGTATGATGTTCTCAGTGAACTGGAGAAGAAATTTGACCGGACAGTTCT GGAAGCTCTATTCAGCAGCATTAACCTGAAGGCCTATCCTGACTTACATCAGATTTTCAG AGACTTCAAAAAAATGATTCTTGAAAACTTCAACTACCAAATCACGAATGAAGGAGAGAC AAAGGACATGATCAACTTACAGTTGGGCCGCGAACAAGTGCCCCTGGAACGTGCATCTCT CCAAATGAATAATATAAGAGGGTTAGAAGATACACCCAGATTACAGCCACGTGACAGACA AGGGGTCAGCAATGCCCTGTTGGAGACCAGTGCTGGAGAACAGACCCTGGAAACCTTGAG ATCCCCACAAAGATATTGGCCAGTGTCCTGCAACCCCGCAGCTCTACCACGTGGTAAAAG AGGAAAATCAGAAGAAACGCTCGGGTGGCTCCCTTATAATAAAGAAGTGACCTGTGATTC CAAAGCTCCTCAAATGACTCACCAGGGAGAATCCAAGGAGGGGCTCAGCCTATCACCAGC AAAGGGAGTAGAGGACAGCAGTACCTGTTGGGAGACCTGCAACGAAGAAGAGCCCCAGGA GGCCTCAAACTCCCCACCAAGACATGGCCCAGTATCTGACGAGCCAGAAGATTTCCAAAT GAATACAGAAGGAGATTTAGAAGAGTTTGCTTCTAGCCCACTCTCCTCTAAAGGACAAGG AGCAGAGCTACCAGCAAATGGAAGTGAGAAGTGTTCCTGTGTTATGTGCTTTTCAAAAGA TGTGCCAGTAGATCCAGAAGCAAGGAACCAAGCTAGTGGCGTGATGGCTCTTGTGGATAG TAGAAACACCTCCACTTTGGGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 265-441, gnl|bosTau2|chr2 (70789986-70789810) | |
| 265-441, gnl|canFam2|chr25 (45470330-45470489) | |
| 265-441, gnl|dasNov1|scaffold_135533 (4564-4435) | |
| 265-441, gnl|echTel1|scaffold_315818 (1038-1199) | |
| 265-441, gnl|hg17|chr2 (230927277-230927436) | |
| 265-441, gnl|Hg17|chr2 (230927300-230927476) | |
| 265-441, gnl|loxAfr1|scaffold_18130 (32444-32600) | |
| 265-441, gnl|mm7|chr1 (85224400-85224542) | |
| 265-441, gnl|Mm7|chr1 (85446187-85446026) | |
| 265-441, gnl|oryCun1|scaffold_176355 (4139-4268) | |
| 265-441, gnl|panTro1|chr13 (121569946-121570102) | |
| 265-441, gnl|rheMac2|chr12 (94108641-94108800) | |
| 265-441, gnl|rn3|chr9 (84471377-84471519) | |
| 449-612, gnl|bosTau2|chr2 (70788439-70788276) | |
| 449-612, gnl|canFam2|chr25 (45471360-45471695) | |
| 449-612, gnl|dasNov1|scaffold_135533 (3456-3094) | |
| 449-612, gnl|echTel1|scaffold_315818 (2413-2791) | |
| 449-612, gnl|hg17|chr2 (230928315-230928654) | |
| 449-612, gnl|Hg17|chr2 (230928436-230928599) | |
| 449-612, gnl|loxAfr1|scaffold_18130 (34003-34346) | |
| 449-612, gnl|mm7|chr1 (85225352-85225694) | |
| 449-612, gnl|Mm7|chr1 (85445148-85444982) | |
| 449-612, gnl|oryCun1|scaffold_176355 (5968-6327) | |
| 449-612, gnl|panTro1|chr13 (121570982-121571321) | |
| 449-612, gnl|rheMac2|chr12 (94109680-94110019) | |
| 449-612, gnl|rn3|chr9 (84472677-84473014) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 265-441, gnl|bosTau2|chr2 (70789986-70789810) | |
| 265-441, gnl|canFam2|chr25 (45470330-45470489) | |
| 265-441, gnl|dasNov1|scaffold_135533 (4564-4435) | |
| 265-441, gnl|echTel1|scaffold_315818 (1038-1199) | |
| 265-441, gnl|hg17|chr2 (230927277-230927436) | |
| 265-441, gnl|Hg17|chr2 (230927300-230927476) | |
| 265-441, gnl|loxAfr1|scaffold_18130 (32444-32600) | |
| 265-441, gnl|mm7|chr1 (85224400-85224542) | |
| 265-441, gnl|Mm7|chr1 (85446187-85446026) | |
| 265-441, gnl|oryCun1|scaffold_176355 (4139-4268) | |
| 265-441, gnl|panTro1|chr13 (121569946-121570102) | |
| 265-441, gnl|rheMac2|chr12 (94108641-94108800) | |
| 265-441, gnl|rn3|chr9 (84471377-84471519) | |
| 449-612, gnl|bosTau2|chr2 (70788439-70788276) | |
| 449-612, gnl|canFam2|chr25 (45471360-45471695) | |
| 449-612, gnl|dasNov1|scaffold_135533 (3456-3094) | |
| 449-612, gnl|echTel1|scaffold_315818 (2413-2791) | |
| 449-612, gnl|hg17|chr2 (230928315-230928654) | |
| 449-612, gnl|Hg17|chr2 (230928436-230928599) | |
| 449-612, gnl|loxAfr1|scaffold_18130 (34003-34346) | |
| 449-612, gnl|mm7|chr1 (85225352-85225694) | |
| 449-612, gnl|Mm7|chr1 (85445148-85444982) | |
| 449-612, gnl|oryCun1|scaffold_176355 (5968-6327) | |
| 449-612, gnl|panTro1|chr13 (121570982-121571321) | |
| 449-612, gnl|rheMac2|chr12 (94109680-94110019) | |
| 449-612, gnl|rn3|chr9 (84472677-84473014) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nlu (0.191681) | |
| ill (0.175593) | |
| che (0.136314) | |
| eje (0.0988338) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| ill (0.175593) | |
| che (0.136314) | |
| eje (0.0988338) |