Ss1.1-LyN1-MLN01A090023.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACAGTTCCCACCGAGCCTCGAGGCAGGAGGAAGAAGAGGCACGGAAGGCCAAAGGGAAA ACCAGGAGAAAGAGCTGGCTGAGGTGGGAGAGGCAGACAGGTACGCAACAGGCAGCCAGA GTCATGCAATTCTCCAGCTCAGCCAGGGCAGCAGACGAGAACTTTGACTACTTGTTCAAG GTCATCCTCGTCGGGGATTCCAACGTGGGCAAGACGTGCGTGGTGCAGCATTTCAAGTCT GGGGTCTACACAGAAGCACAGCAGAATACGATTGGGGTGGACTTCACGGTGCGTGCCCTG GAGATCGACGGCAAGAAAGTGAAGATGCAGGTGTGGGACACCGCAGGCCAGGAGCGCTTC CGGACCATCACCCAAAGCTACTACCGCAGTGCCCACGCGGCCATCATTGCCTACGACCTC ACCCGGCGGTCCACGTTCGAGTCTGTTCCCCACTGGATTCACGAGATAGAGAAATACGGA GCGGCCAACTTGGTCATTATGCTGATCGGGAACAAATGCGACCTGTGGGAAAAACGGCAC GTTCTGTTTGAGGATGCCTGCACACTGGCCGAGAAATACGGCCTCCTGGCTGTTTTGGAG ACGTCCGCCAAGGAGTCTAAAAACATCGACGAGGTCTTCGTGCTGATGGCCAGGGAGCTG ATCGCCCGCAACAGCCTGCCCTTGTACGCGGAGGGCGCCCTGAGCAGCCTGCCCCTAGAT TCCAGTCCCGTTCTCACGGTCAGTCCGAGGGAGAAGACCCAGTGCACCTGCTGAGAATGG TCCCCAGGCTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACAGTTCCCACCGAGCCTCGAGGCAGGAGGAAGAAGAGGCACGGAAGGCCAAAGGGAAA ACCAGGAGAAAGAGCTGGCTGAGGTGGGAGAGGCAGACAGGTACGCAACAGGCAGCCAGA GTCATGCAATTCTCCAGCTCAGCCAGGGCAGCAGACGAGAACTTTGACTACTTGTTCAAG GTCATCCTCGTCGGGGATTCCAACGTGGGCAAGACGTGCGTGGTGCAGCATTTCAAGTCT GGGGTCTACACAGAAGCACAGCAGAATACGATTGGGGTGGACTTCACGGTGCGTGCCCTG GAGATCGACGGCAAGAAAGTGAAGATGCAGGTGTGGGACACCGCAGGCCAGGAGCGCTTC CGGACCATCACCCAAAGCTACTACCGCAGTGCCCACGCGGCCATCATTGCCTACGACCTC ACCCGGCGGTCCACGTTCGAGTCTGTTCCCCACTGGATTCACGAGATAGAGAAATACGGA GCGGCCAACTTGGTCATTATGCTGATCGGGAACAAATGCGACCTGTGGGAAAAACGGCAC GTTCTGTTTGAGGATGCCTGCACACTGGCCGAGAAATACGGCCTCCTGGCTGTTTTGGAG ACGTCCGCCAAGGAGTCTAAAAACATCGACGAGGTCTTCGTGCTGATGGCCAGGGAGCTG ATCGCCCGCAACAGCCTGCCCTTGTACGCGGAGGGCGCCCTGAGCAGCCTGCCCCTAGAT TCCAGTCCCGTTCTCACGGTCAGTCCGAGGGAGAAGACCCAGTGCACCTGCTGAGAATGG TCCCCAGGCTGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 1-112, gnl|bosTau2|chr4 (57478448-57478563) | |
| 1-112, gnl|canFam2|chr16 (11526341-11525922) | |
| 1-112, gnl|dasNov1|scaffold_71806 (627-1095) | |
| 1-112, gnl|echTel1|scaffold_202778 (979-1370) | |
| 1-112, gnl|hg17|chr7 (139557046-139557463) | |
| 1-112, gnl|Hg17|chr7 (139557082-139557213) | |
| 1-112, gnl|loxAfr1|scaffold_118432 (5277-4867) | |
| 1-112, gnl|mm7|chr6 (39311333-39311747) | |
| 1-112, gnl|Mm7|chr6 (39311369-39311497) | |
| 1-112, gnl|monDom2|scaffold_22 (1743937-1743453) | |
| 1-112, gnl|oryCun1|scaffold_152198 (554-849) | |
| 1-112, gnl|panTro1|chr6 (142299836-142300252) | |
| 1-112, gnl|rheMac2|chr3 (177904706-177905122) | |
| 1-112, gnl|rn3|chr4 (67165528-67165941) | |
| 323-509, gnl|bosTau2|chr22 (47624652-47624466) | |
| 323-509, gnl|canFam2|chr20 (6011681-6011552) | |
| 323-509, gnl|canFam2|chr20 (6011695-6011573) | |
| 323-509, gnl|danRer3|chr11 (1141444-1141583) | |
| 323-509, gnl|danRer3|chr11 (1141440-1141562) | |
| 323-509, gnl|dasNov1|scaffold_110884 (2616-2755) | |
| 323-509, gnl|dasNov1|scaffold_110884 (2612-2734) | |
| 323-509, gnl|echTel1|scaffold_111597 (631-492) | |
| 323-509, gnl|echTel1|scaffold_111597 (631-513) | |
| 323-509, gnl|fr1|chrUn (186973226-186973087) | |
| 323-509, gnl|fr1|chrUn (6835369-6835491) | |
| 323-509, gnl|galGal2|chr12 (5146583-5146722) | |
| 323-509, gnl|galGal2|chr12 (5146579-5146701) | |
| 323-509, gnl|hg17|chr16 (45218068-45218207) | |
| 323-509, gnl|hg17|chr3 (130296523-130296645) | |
| 323-509, gnl|Hg17|chr3 (130296712-130296526) | |
| 323-509, gnl|loxAfr1|scaffold_22652 (52325-52184) | |
| 323-509, gnl|loxAfr1|scaffold_22652 (52329-52205) | |
| 323-509, gnl|mm7|chr6 (87869707-87869846) | |
| 323-509, gnl|mm7|chr6 (87869703-87869825) | |
| 323-509, gnl|Mm7|chr6 (87869892-87869706) | |
| 323-509, gnl|monDom2|scaffold_5 (47880551-47880690) | |
| 323-509, gnl|monDom2|scaffold_5 (47880547-47880669) | |
| 323-509, gnl|oryCun1|scaffold_152198 (3777-3640) | |
| 323-509, gnl|oryCun1|scaffold_152198 (3783-3661) | |
| 323-509, gnl|panTro1|chr2 (132346612-132346728) | |
| 323-509, gnl|panTro1|chr2 (132346606-132346728) | |
| 323-509, gnl|rheMac2|chr11 (85767366-85767324) | |
| 323-509, gnl|rheMac2|chr11 (85764053-85763931) | |
| 323-509, gnl|rn3|chr4 (122226802-122226941) | |
| 323-509, gnl|rn3|chr4 (122226798-122226920) | |
| 323-509, gnl|tetNig1|chr13 (6331557-6331696) | |
| 323-509, gnl|tetNig1|chr13 (6331553-6331675) | |
| 323-509, gnl|xenTro1|scaffold_835 (223381-223520) | |
| 323-509, gnl|xenTro1|scaffold_835 (223377-223499) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-112, gnl|bosTau2|chr4 (57478448-57478563) | |
| 1-112, gnl|canFam2|chr16 (11526341-11525922) | |
| 1-112, gnl|dasNov1|scaffold_71806 (627-1095) | |
| 1-112, gnl|echTel1|scaffold_202778 (979-1370) | |
| 1-112, gnl|hg17|chr7 (139557046-139557463) | |
| 1-112, gnl|Hg17|chr7 (139557082-139557213) | |
| 1-112, gnl|loxAfr1|scaffold_118432 (5277-4867) | |
| 1-112, gnl|mm7|chr6 (39311333-39311747) | |
| 1-112, gnl|Mm7|chr6 (39311369-39311497) | |
| 1-112, gnl|monDom2|scaffold_22 (1743937-1743453) | |
| 1-112, gnl|oryCun1|scaffold_152198 (554-849) | |
| 1-112, gnl|panTro1|chr6 (142299836-142300252) | |
| 1-112, gnl|rheMac2|chr3 (177904706-177905122) | |
| 1-112, gnl|rn3|chr4 (67165528-67165941) | |
| 323-509, gnl|bosTau2|chr22 (47624652-47624466) | |
| 323-509, gnl|canFam2|chr20 (6011681-6011552) | |
| 323-509, gnl|canFam2|chr20 (6011695-6011573) | |
| 323-509, gnl|danRer3|chr11 (1141444-1141583) | |
| 323-509, gnl|danRer3|chr11 (1141440-1141562) | |
| 323-509, gnl|dasNov1|scaffold_110884 (2616-2755) | |
| 323-509, gnl|dasNov1|scaffold_110884 (2612-2734) | |
| 323-509, gnl|echTel1|scaffold_111597 (631-492) | |
| 323-509, gnl|echTel1|scaffold_111597 (631-513) | |
| 323-509, gnl|fr1|chrUn (186973226-186973087) | |
| 323-509, gnl|fr1|chrUn (6835369-6835491) | |
| 323-509, gnl|galGal2|chr12 (5146583-5146722) | |
| 323-509, gnl|galGal2|chr12 (5146579-5146701) | |
| 323-509, gnl|hg17|chr16 (45218068-45218207) | |
| 323-509, gnl|hg17|chr3 (130296523-130296645) | |
| 323-509, gnl|Hg17|chr3 (130296712-130296526) | |
| 323-509, gnl|loxAfr1|scaffold_22652 (52325-52184) | |
| 323-509, gnl|loxAfr1|scaffold_22652 (52329-52205) | |
| 323-509, gnl|mm7|chr6 (87869707-87869846) | |
| 323-509, gnl|mm7|chr6 (87869703-87869825) | |
| 323-509, gnl|Mm7|chr6 (87869892-87869706) | |
| 323-509, gnl|monDom2|scaffold_5 (47880551-47880690) | |
| 323-509, gnl|monDom2|scaffold_5 (47880547-47880669) | |
| 323-509, gnl|oryCun1|scaffold_152198 (3777-3640) | |
| 323-509, gnl|oryCun1|scaffold_152198 (3783-3661) | |
| 323-509, gnl|panTro1|chr2 (132346612-132346728) | |
| 323-509, gnl|panTro1|chr2 (132346606-132346728) | |
| 323-509, gnl|rheMac2|chr11 (85767366-85767324) | |
| 323-509, gnl|rheMac2|chr11 (85764053-85763931) | |
| 323-509, gnl|rn3|chr4 (122226802-122226941) | |
| 323-509, gnl|rn3|chr4 (122226798-122226920) | |
| 323-509, gnl|tetNig1|chr13 (6331557-6331696) | |
| 323-509, gnl|tetNig1|chr13 (6331553-6331675) | |
| 323-509, gnl|xenTro1|scaffold_835 (223381-223520) | |
| 323-509, gnl|xenTro1|scaffold_835 (223377-223499) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) |