Non-Coding RNA Search

Ss1.1-LyN1-MLN01A100076.5

Sequence:


               
               TGGAGCAGGCGATGCAAATGGCCAAAGAAGCCCTAGAAAATACTGAGGTTCCTGTTGGCT
GCCTCATGGTCTACAACAATGAAGTTGTGGGGAAGGGAAGAAACGAAGTTAATCAAACCA
AAAATGCTACTCGACATGCAGAGATGGTGGCCATCGACCAGGTCCTAGACTGGTGTCGTC
GAGGTGGCAAGAGTCCTTCGGAAGTGTTTGAACGCACTGTGTTGTATGTCACCGTGGAGC
CGTGTATCATGTGCGCAGCTGCTCTCCGCCTGATGAAAATCCCGCTGGTCGTCTATGGCT
GTCAGAACGAACGATTTGGCGGCTGTGGCTCTGTTCTAGACATTGCGTCTGCTGATTTAC
CGAATACTGGGAGACCGTTTCAGTGCATCCCTGGATATCGGGCTGAGGAAGCAGTGGAAA
TGTTAAAGACCTTCTACAAACAAGAAAATCCAAATGCACCAAAATCAAAGGTTCGGAAAA
AGGAATGCCAGAAATCCTGAACTTGCTCTAATGAAGGACTCGTGCCCCTGGACAACATTC
TTGGACTGAAAGCTGTTGACGTCGTTAAATAATATGTTTATATATTGTCCTTAACCCATG
GGAAATGGTTTCTCATCATTTGCTCTGCTAAAGGGACAAATGAGCACTTTTTAAAACTCT
GACAATGTAAGCAACTCTTAGCTTTTCCACAAGCTGGAAGAACATTTTTAAGAAGAGGAA
AAATTAAAGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAGCAGGCGATGCAAATGGCCAAAGAAGCCCTAGAAAATACTGAGGTTCCTGTTGGCT
GCCTCATGGTCTACAACAATGAAGTTGTGGGGAAGGGAAGAAACGAAGTTAATCAAACCA
AAAATGCTACTCGACATGCAGAGATGGTGGCCATCGACCAGGTCCTAGACTGGTGTCGTC
GAGGTGGCAAGAGTCCTTCGGAAGTGTTTGAACGCACTGTGTTGTATGTCACCGTGGAGC
CGTGTATCATGTGCGCAGCTGCTCTCCGCCTGATGAAAATCCCGCTGGTCGTCTATGGCT
GTCAGAACGAACGATTTGGCGGCTGTGGCTCTGTTCTAGACATTGCGTCTGCTGATTTAC
CGAATACTGGGAGACCGTTTCAGTGCATCCCTGGATATCGGGCTGAGGAAGCAGTGGAAA
TGTTAAAGACCTTCTACAAACAAGAAAATCCAAATGCACCAAAATCAAAGGTTCGGAAAA
AGGAATGCCAGAAATCCTGAACTTGCTCTAATGAAGGACTCGTGCCCCTGGACAACATTC
TTGGACTGAAAGCTGTTGACGTCGTTAAATAATATGTTTATATATTGTCCTTAACCCATG
GGAAATGGTTTCTCATCATTTGCTCTGCTAAAGGGACAAATGAGCACTTTTTAAAACTCT
GACAATGTAAGCAACTCTTAGCTTTTCCACAAGCTGGAAGAACATTTTTAAGAAGAGGAA
AAATTAAAGATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|23273707|gb|AAH37955.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|23273707|gb|AAH37955.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               126-282, gnl|bosTau2|chr9 (48268372-48268528)
               

               
               126-282, gnl|Hg17|chr6 (143796811-143796655)
               

               
               126-282, gnl|Mm7|chr10 (13260471-13260627)
               


               
               456-732, gnl|bosTau2|chr9 (48274588-48274867)
               

               
               456-732, gnl|Hg17|chr6 (143791337-143791048)
               

               
               456-732, gnl|Mm7|chr10 (13263171-13263453)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-282, gnl|bosTau2|chr9 (48268372-48268528)
               

               
               126-282, gnl|Hg17|chr6 (143796811-143796655)
               

               
               126-282, gnl|Mm7|chr10 (13260471-13260627)
               


               
               456-732, gnl|bosTau2|chr9 (48274588-48274867)
               

               
               456-732, gnl|Hg17|chr6 (143791337-143791048)
               

               
               456-732, gnl|Mm7|chr10 (13263171-13263453)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               gul (0.177588)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)

	126-282, gnl\|bosTau2\|chr9 (48268372-48268528)
	126-282, gnl\|Hg17\|chr6 (143796811-143796655)
	126-282, gnl\|Mm7\|chr10 (13260471-13260627)

	456-732, gnl\|bosTau2\|chr9 (48274588-48274867)
	456-732, gnl\|Hg17\|chr6 (143791337-143791048)
	456-732, gnl\|Mm7\|chr10 (13263171-13263453)