Ss1.1-LyN1-MLN01A110071.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAACTGGAATAGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGTAATCTCCC AGACCTTCACCAATGGAGGATCTCCGTGAAGCAAATGGCACTTTTGCCATCAACTTATTA AAAATGTTGAGTGAAGAGGACAACTTGCGAAATGTGTTCTTGTCTCCCCTGAGCCTCTCC TCCGCCCTGGCCATGGTCTTATTGGGGGCCAAAGGAAACACAGAGGCCCAGATGTCTCAG GCACTTTGTTTGAACAGAGTTGGAGATGTTCACCAAAGTTTCCAGTCACTGCTAAAGGAA ATGAACAAATCCACCACCCAGTGCTTGCTTAGAACTGCCAATAGACTCTTTGGGGAAAAG ACATGTGACTTCTTGCCAGCTTTTAAGGAATCCTGCCAGAATTTCTATGAGGCAGACCTG GAGGAGCTGTCCTTTGCTGAAGACACTGAAGAATGCAGGAAACACATAAACGACTGGGTG AAGGAGAAGACAGAAGGTAAGATTTCAGAGATACTGGGTGCTGGGACAGTCGGTCCTCTG ACTAAGTTGGTCCTCGTGAATGCCATCTATTTCAAAGGAAAGTGGAACAAGCAATTTGAC AGGAAGTACACAAGGGGGATGCCCTTTAAAACCAACCAGGAGAAGAAGACAGTGCAGATG ATGTTTAAGCAAGCTAAATTTAAAATGGGGTATGTAGATGAGGTGCATGCCCAGGTTCTG GAGCTGCCCTATGTGGGGGAGGAGCTGAGCATGGTCATTCTGCTGCCTGATGACAACACT GATCTCGCCGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAACTGGAATAGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGTAATCTCCC AGACCTTCACCAATGGAGGATCTCCGTGAAGCAAATGGCACTTTTGCCATCAACTTATTA AAAATGTTGAGTGAAGAGGACAACTTGCGAAATGTGTTCTTGTCTCCCCTGAGCCTCTCC TCCGCCCTGGCCATGGTCTTATTGGGGGCCAAAGGAAACACAGAGGCCCAGATGTCTCAG GCACTTTGTTTGAACAGAGTTGGAGATGTTCACCAAAGTTTCCAGTCACTGCTAAAGGAA ATGAACAAATCCACCACCCAGTGCTTGCTTAGAACTGCCAATAGACTCTTTGGGGAAAAG ACATGTGACTTCTTGCCAGCTTTTAAGGAATCCTGCCAGAATTTCTATGAGGCAGACCTG GAGGAGCTGTCCTTTGCTGAAGACACTGAAGAATGCAGGAAACACATAAACGACTGGGTG AAGGAGAAGACAGAAGGTAAGATTTCAGAGATACTGGGTGCTGGGACAGTCGGTCCTCTG ACTAAGTTGGTCCTCGTGAATGCCATCTATTTCAAAGGAAAGTGGAACAAGCAATTTGAC AGGAAGTACACAAGGGGGATGCCCTTTAAAACCAACCAGGAGAAGAAGACAGTGCAGATG ATGTTTAAGCAAGCTAAATTTAAAATGGGGTATGTAGATGAGGTGCATGCCCAGGTTCTG GAGCTGCCCTATGTGGGGGAGGAGCTGAGCATGGTCATTCTGCTGCCTGATGACAACACT GATCTCGCCGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 59-241, gnl|bosTau2|chr23 (31766119-31765937) | |
| 59-241, gnl|canFam2|chr35 (6182343-6182580) | |
| 59-241, gnl|dasNov1|scaffold_34225 (10148-10352) | |
| 59-241, gnl|echTel1|scaffold_250028 (571-773) | |
| 59-241, gnl|fr1|chrUn (267184155-267183955) | |
| 59-241, gnl|galGal2|chr2 (67465775-67465992) | |
| 59-241, gnl|hg17|chr6 (2818117-2818344) | |
| 59-241, gnl|Hg17|chr6 (2845858-2845676) | |
| 59-241, gnl|loxAfr1|scaffold_21949 (30555-30782) | |
| 59-241, gnl|mm7|chr13 (32395180-32394996) | |
| 59-241, gnl|Mm7|chr13 (32372076-32372258) | |
| 59-241, gnl|oryCun1|scaffold_187490 (15485-15274) | |
| 59-241, gnl|panTro1|chr5 (2832478-2832704) | |
| 59-241, gnl|rheMac2|chr4 (2735992-2736219) | |
| 59-241, gnl|rn3|chr17 (37750929-37751115) | |
| 379-501, gnl|bosTau2|chr4 (40286568-40286446) | |
| 379-501, gnl|canFam2|chr1 (16223757-16223624) | |
| 379-501, gnl|danRer3|chr16 (52456025-52455900) | |
| 379-501, gnl|dasNov1|scaffold_34225 (6068-5943) | |
| 379-501, gnl|echTel1|scaffold_112688 (541-680) | |
| 379-501, gnl|fr1|chrUn (310092889-310093024) | |
| 379-501, gnl|galGal2|chr2 (67396165-67396041) | |
| 379-501, gnl|hg17|chr18 (59799934-59800074) | |
| 379-501, gnl|Hg17|chr18 (59799935-59800057) | |
| 379-501, gnl|loxAfr1|scaffold_28878 (25647-25525) | |
| 379-501, gnl|mm7|chr1 (107502777-107502917) | |
| 379-501, gnl|Mm7|chr1 (107502778-107502900) | |
| 379-501, gnl|monDom2|scaffold_4 (68247244-68247383) | |
| 379-501, gnl|oryCun1|scaffold_80936 (5942-5809) | |
| 379-501, gnl|panTro1|chr17 (56651947-56652087) | |
| 379-501, gnl|rheMac2|chr18 (57387741-57387881) | |
| 379-501, gnl|rn3|chr13 (13709882-13710022) | |
| 379-501, gnl|tetNig1|chrUn_random (45305985-45305865) | |
| 379-501, gnl|xenTro1|scaffold_78 (749718-749594) | |
| 637-792, gnl|bosTau2|chr4 (40284142-40283987) | |
| 637-792, gnl|Hg17|chr18 (59803304-59803459) | |
| 637-792, gnl|Mm7|chr1 (107505759-107505914) | |
| 638-777, gnl|bosTau2|chr23 (31760999-31760860) | |
| 638-777, gnl|canFam2|chr35 (6191759-6191927) | |
| 638-777, gnl|danRer3|chr20 (40288669-40288827) | |
| 638-777, gnl|dasNov1|scaffold_34225 (1322-1488) | |
| 638-777, gnl|echTel1|scaffold_194209 (3492-3659) | |
| 638-777, gnl|fr1|chrUn (46731257-46731395) | |
| 638-777, gnl|galGal2|chr2 (67393403-67393531) | |
| 638-777, gnl|hg17|chr6 (2837066-2837232) | |
| 638-777, gnl|Hg17|chr6 (2837220-2837081) | |
| 638-777, gnl|loxAfr1|scaffold_46165 (14337-14486) | |
| 638-777, gnl|mm7|chr13 (32517343-32517509) | |
| 638-777, gnl|Mm7|chr13 (32379410-32379549) | |
| 638-777, gnl|monDom2|scaffold_4 (68252816-68252650) | |
| 638-777, gnl|oryCun1|scaffold_80936 (2914-3072) | |
| 638-777, gnl|panTro1|chr5 (2851563-2851729) | |
| 638-777, gnl|rheMac2|chr4 (2757980-2758146) | |
| 638-777, gnl|rn3|chr17 (37654158-37653992) | |
| 638-777, gnl|xenTro1|scaffold_78 (748291-748454) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-241, gnl|bosTau2|chr23 (31766119-31765937) | |
| 59-241, gnl|canFam2|chr35 (6182343-6182580) | |
| 59-241, gnl|dasNov1|scaffold_34225 (10148-10352) | |
| 59-241, gnl|echTel1|scaffold_250028 (571-773) | |
| 59-241, gnl|fr1|chrUn (267184155-267183955) | |
| 59-241, gnl|galGal2|chr2 (67465775-67465992) | |
| 59-241, gnl|hg17|chr6 (2818117-2818344) | |
| 59-241, gnl|Hg17|chr6 (2845858-2845676) | |
| 59-241, gnl|loxAfr1|scaffold_21949 (30555-30782) | |
| 59-241, gnl|mm7|chr13 (32395180-32394996) | |
| 59-241, gnl|Mm7|chr13 (32372076-32372258) | |
| 59-241, gnl|oryCun1|scaffold_187490 (15485-15274) | |
| 59-241, gnl|panTro1|chr5 (2832478-2832704) | |
| 59-241, gnl|rheMac2|chr4 (2735992-2736219) | |
| 59-241, gnl|rn3|chr17 (37750929-37751115) | |
| 379-501, gnl|bosTau2|chr4 (40286568-40286446) | |
| 379-501, gnl|canFam2|chr1 (16223757-16223624) | |
| 379-501, gnl|danRer3|chr16 (52456025-52455900) | |
| 379-501, gnl|dasNov1|scaffold_34225 (6068-5943) | |
| 379-501, gnl|echTel1|scaffold_112688 (541-680) | |
| 379-501, gnl|fr1|chrUn (310092889-310093024) | |
| 379-501, gnl|galGal2|chr2 (67396165-67396041) | |
| 379-501, gnl|hg17|chr18 (59799934-59800074) | |
| 379-501, gnl|Hg17|chr18 (59799935-59800057) | |
| 379-501, gnl|loxAfr1|scaffold_28878 (25647-25525) | |
| 379-501, gnl|mm7|chr1 (107502777-107502917) | |
| 379-501, gnl|Mm7|chr1 (107502778-107502900) | |
| 379-501, gnl|monDom2|scaffold_4 (68247244-68247383) | |
| 379-501, gnl|oryCun1|scaffold_80936 (5942-5809) | |
| 379-501, gnl|panTro1|chr17 (56651947-56652087) | |
| 379-501, gnl|rheMac2|chr18 (57387741-57387881) | |
| 379-501, gnl|rn3|chr13 (13709882-13710022) | |
| 379-501, gnl|tetNig1|chrUn_random (45305985-45305865) | |
| 379-501, gnl|xenTro1|scaffold_78 (749718-749594) | |
| 637-792, gnl|bosTau2|chr4 (40284142-40283987) | |
| 637-792, gnl|Hg17|chr18 (59803304-59803459) | |
| 637-792, gnl|Mm7|chr1 (107505759-107505914) | |
| 638-777, gnl|bosTau2|chr23 (31760999-31760860) | |
| 638-777, gnl|canFam2|chr35 (6191759-6191927) | |
| 638-777, gnl|danRer3|chr20 (40288669-40288827) | |
| 638-777, gnl|dasNov1|scaffold_34225 (1322-1488) | |
| 638-777, gnl|echTel1|scaffold_194209 (3492-3659) | |
| 638-777, gnl|fr1|chrUn (46731257-46731395) | |
| 638-777, gnl|galGal2|chr2 (67393403-67393531) | |
| 638-777, gnl|hg17|chr6 (2837066-2837232) | |
| 638-777, gnl|Hg17|chr6 (2837220-2837081) | |
| 638-777, gnl|loxAfr1|scaffold_46165 (14337-14486) | |
| 638-777, gnl|mm7|chr13 (32517343-32517509) | |
| 638-777, gnl|Mm7|chr13 (32379410-32379549) | |
| 638-777, gnl|monDom2|scaffold_4 (68252816-68252650) | |
| 638-777, gnl|oryCun1|scaffold_80936 (2914-3072) | |
| 638-777, gnl|panTro1|chr5 (2851563-2851729) | |
| 638-777, gnl|rheMac2|chr4 (2757980-2758146) | |
| 638-777, gnl|rn3|chr17 (37654158-37653992) | |
| 638-777, gnl|xenTro1|scaffold_78 (748291-748454) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| sug (0.127291) |