Non-Coding RNA Search

Ss1.1-LyN1-MLN01A120048.5

Sequence:


               
               TTTTCCCCTCATGAATGGCAGAATATTACTGAGCTGTTAGGCCCCCTTCCCCCCATTATA
ATGGTATTTCCCAAACCTACCAATAATTCAGCACTACAGTCCAGACCTTTGAGGATCTAG
CTTTCAGTCTAGAATGGGAACTTAGCTGGATCCATGCCCAAGCCAATGTTTAATAGAGCT
TTCTACAGATACTCTTTGTCTAGGTTATTTTCAGTATATATCACCATCCGCGTGTCTCTT
GTAAAACAGCCTGAAGTAACGGGTCACATGGCTGTACCTTTGGATAATTGTGCATCAAGG
TATGATTCTTTCTTTATCCCTGATGTTAATCTACCCAAACCGGCCCCCTCTCACGTGAGG
TGGTAAAGGTTGTCCCACCCACCAGTGGTTGCGATGGCTGATGAGAACGTGCTATGTGGT
TTCTGCTGCAGAGGGCAGTGTGGCTGTAACAGAAACAGTGGTCCTCCCTTTGCATTCTTT
ACCTGTGTGTCCCGAAAACAGAGTTCGAACAAATATTTTAAAGGTGCAGAGTACTATTAG
AAAATACTATTTGAAATGAACCTTATAGGAATATCTTGGCATAATGGCCACAAAATACTT
TATTGCTTGGCAGAAAAGAGGTATAGAGGAAAGTAGCACATTAGCATTGAAGACTGCTTG
TTTCGCCCAGTGAAGGCAAGTGCAGTGTACAAAGAAGTATAATATCCTGAATGCGTTATT
TCCATTCATTCAGCACAAATAAATCGTTTGGTTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCCCCTCATGAATGGCAGAATATTACTGAGCTGTTAGGCCCCCTTCCCCCCATTATA
ATGGTATTTCCCAAACCTACCAATAATTCAGCACTACAGTCCAGACCTTTGAGGATCTAG
CTTTCAGTCTAGAATGGGAACTTAGCTGGATCCATGCCCAAGCCAATGTTTAATAGAGCT
TTCTACAGATACTCTTTGTCTAGGTTATTTTCAGTATATATCACCATCCGCGTGTCTCTT
GTAAAACAGCCTGAAGTAACGGGTCACATGGCTGTACCTTTGGATAATTGTGCATCAAGG
TATGATTCTTTCTTTATCCCTGATGTTAATCTACCCAAACCGGCCCCCTCTCACGTGAGG
TGGTAAAGGTTGTCCCACCCACCAGTGGTTGCGATGGCTGATGAGAACGTGCTATGTGGT
TTCTGCTGCAGAGGGCAGTGTGGCTGTAACAGAAACAGTGGTCCTCCCTTTGCATTCTTT
ACCTGTGTGTCCCGAAAACAGAGTTCGAACAAATATTTTAAAGGTGCAGAGTACTATTAG
AAAATACTATTTGAAATGAACCTTATAGGAATATCTTGGCATAATGGCCACAAAATACTT
TATTGCTTGGCAGAAAAGAGGTATAGAGGAAAGTAGCACATTAGCATTGAAGACTGCTTG
TTTCGCCCAGTGAAGGCAAGTGCAGTGTACAAAGAAGTATAATATCCTGAATGCGTTATT
TCCATTCATTCAGCACAAATAAATCGTTTGGTTTCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               10-756, gnl|bosTau2|chr28 (11258921-11259682)
               

               
               10-756, gnl|Hg17|chr10 (61222306-61221527)
               

               
               10-756, gnl|Mm7|chr10 (69791900-69792631)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-756, gnl|bosTau2|chr28 (11258921-11259682)
               

               
               10-756, gnl|Hg17|chr10 (61222306-61221527)
               

               
               10-756, gnl|Mm7|chr10 (69791900-69792631)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               tbr (0.308356)
               

               
               sto (0.179824)
               

               
               cje (0.165235)
               

               
               fco (0.157208)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.308356)
               

               
               sto (0.179824)
               

               
               cje (0.165235)
               

               
               fco (0.157208)
               

               
               spc (0.113366)

	10-756, gnl\|bosTau2\|chr28 (11258921-11259682)
	10-756, gnl\|Hg17\|chr10 (61222306-61221527)
	10-756, gnl\|Mm7\|chr10 (69791900-69792631)

	tbr (0.308356)
	sto (0.179824)
	cje (0.165235)
	fco (0.157208)
	spc (0.113366)