Ss1.1-LyN1-MLN01A120059.5
|
AAAAGAGGCCTGGGCGGGCGGAGGGAGGCTGTGGAGAGAGCCCGAGAGGAGCGAGCGGAG
CGCAGCAGCAGCAGCAGCAGCGAGCGAGGCTACCACCGCCGGGCCGGGCGCAGCGGCAGC
GAGTGGAGCCAGGAGGCGCGCTCCGGGCAGAAAGAGCCTGCCGCCCGCCGAGCCGGCGCC
CGAAAGCGCGGGCGCCCTCCCCGAGTCCCTGCTCCCGCGCCGTGGCCCCGGCCAGCATGA
GGCTCCTGACGGCCGCGCTGCTCCTGCTGCTCCTGGCGCTGTGTGCTGCGCGCGTGGACG
GGTCCAAATGCAAGTGCTCCCGGAAGGGACCCAAGATCCGCTACAGCGACGTGAAGAAGC
TGGAAATGAAGCCAAAGTACCCGCACTGCGAGGAGAAGATGGTTATCATCACCACCAAGA
GCATGTCCAGGTACCGAGGTCAGGAGCACTGCCTGCATCCCAAGCTGCAGAGCACCAAGC
GGTTCATCAAGTGGTACAACGCCTGGAATGAGAAGCGCAGGGTCTATGAAGAATAGGGTG
AAAAATCCCCCGAGGGAAAACGTCACACCGATCAGGAGACGAGCAAAGGACTTTGCCGAT
TAAACAAACAAACCCTTTCTTTGTCACAGGCATAAGACACGAATTAAACATGGTTACCCA
GCACTTTTACCGAGGGTCGGTGGTTCGTTTTATAGCTGCGAGCAAAAGGCTTCCAGATGT
GAGAGCCTTCTCTCGCGCTCCAGACACCATCACAAGCTGCTTTTTACTGAAAAGGGGGAA
AACTCATGCATTTCCTTTGTTTAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAGAGGCCTGGGCGGGCGGAGGGAGGCTGTGGAGAGAGCCCGAGAGGAGCGAGCGGAG
CGCAGCAGCAGCAGCAGCAGCGAGCGAGGCTACCACCGCCGGGCCGGGCGCAGCGGCAGC
GAGTGGAGCCAGGAGGCGCGCTCCGGGCAGAAAGAGCCTGCCGCCCGCCGAGCCGGCGCC
CGAAAGCGCGGGCGCCCTCCCCGAGTCCCTGCTCCCGCGCCGTGGCCCCGGCCAGCATGA
GGCTCCTGACGGCCGCGCTGCTCCTGCTGCTCCTGGCGCTGTGTGCTGCGCGCGTGGACG
GGTCCAAATGCAAGTGCTCCCGGAAGGGACCCAAGATCCGCTACAGCGACGTGAAGAAGC
TGGAAATGAAGCCAAAGTACCCGCACTGCGAGGAGAAGATGGTTATCATCACCACCAAGA
GCATGTCCAGGTACCGAGGTCAGGAGCACTGCCTGCATCCCAAGCTGCAGAGCACCAAGC
GGTTCATCAAGTGGTACAACGCCTGGAATGAGAAGCGCAGGGTCTATGAAGAATAGGGTG
AAAAATCCCCCGAGGGAAAACGTCACACCGATCAGGAGACGAGCAAAGGACTTTGCCGAT
TAAACAAACAAACCCTTTCTTTGTCACAGGCATAAGACACGAATTAAACATGGTTACCCA
GCACTTTTACCGAGGGTCGGTGGTTCGTTTTATAGCTGCGAGCAAAAGGCTTCCAGATGT
GAGAGCCTTCTCTCGCGCTCCAGACACCATCACAAGCTGCTTTTTACTGAAAAGGGGGAA
AACTCATGCATTTCCTTTGTTTAAAAAAAAAAAAAA
|
|
gi|34576169|gb|AAQ75577.1| |
Protein identifier
|
gi|34576169|gb|AAQ75577.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-301, gnl|bosTau2|chr1 (25673519-25673799) |
|
1-301, gnl|Hg17|chr5 (134942610-134942303) |
|
1-301, gnl|Mm7|chr13 (55385669-55385360) |
| |
|
518-816, gnl|bosTau2|chr1 (25680739-25681040) |
|
518-816, gnl|canFam2|chr11 (26611346-26611590) |
|
518-816, gnl|echTel1|scaffold_284729 (3890-3614) |
|
518-816, gnl|galGal2|chr13 (14237814-14237542) |
|
518-816, gnl|hg17|chr5 (134935132-134935407) |
|
518-816, gnl|Hg17|chr5 (134935460-134935135) |
|
518-816, gnl|loxAfr1|scaffold_17732 (800-557) |
|
518-816, gnl|mm7|chr13 (55378756-55379008) |
|
518-816, gnl|Mm7|chr13 (55379061-55378758) |
|
518-816, gnl|monDom2|scaffold_6 (100169653-100169879) |
|
518-816, gnl|panTro1|chr4 (141286033-141286301) |
|
518-816, gnl|rheMac2|chr6 (132002256-132002524) |
|
518-816, gnl|rn3|chr17 (14294673-14294422) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-301, gnl|bosTau2|chr1 (25673519-25673799) |
|
1-301, gnl|Hg17|chr5 (134942610-134942303) |
|
1-301, gnl|Mm7|chr13 (55385669-55385360) |
| |
|
518-816, gnl|bosTau2|chr1 (25680739-25681040) |
|
518-816, gnl|canFam2|chr11 (26611346-26611590) |
|
518-816, gnl|echTel1|scaffold_284729 (3890-3614) |
|
518-816, gnl|galGal2|chr13 (14237814-14237542) |
|
518-816, gnl|hg17|chr5 (134935132-134935407) |
|
518-816, gnl|Hg17|chr5 (134935460-134935135) |
|
518-816, gnl|loxAfr1|scaffold_17732 (800-557) |
|
518-816, gnl|mm7|chr13 (55378756-55379008) |
|
518-816, gnl|Mm7|chr13 (55379061-55378758) |
|
518-816, gnl|monDom2|scaffold_6 (100169653-100169879) |
|
518-816, gnl|panTro1|chr4 (141286033-141286301) |
|
518-816, gnl|rheMac2|chr6 (132002256-132002524) |
|
518-816, gnl|rn3|chr17 (14294673-14294422) |
|
eep (2.08359) |
|
col (0.585023) |
|
eru (0.480192) |
|
hyp (0.42851) |
|
elu (0.385356) |
|
nep (0.36785) |
|
spc (0.340097) |
|
cag (0.302389) |
|
ebs (0.236602) |
|
jej (0.197844) |
|
sto (0.179824) |
|
ill (0.175593) |
|
sin (0.174948) |
|
rec (0.17307) |
|
nco (0.161734) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
ute (0.132784) |
|
bla (0.124347) |
|
cly (0.120642) |
|
med (0.116252) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
eep (2.08359) |
|
col (0.585023) |
|
eru (0.480192) |
|
hyp (0.42851) |
|
elu (0.385356) |
|
nep (0.36785) |
|
spc (0.340097) |
|
cag (0.302389) |
|
ebs (0.236602) |
|
jej (0.197844) |
|
sto (0.179824) |
|
ill (0.175593) |
|
sin (0.174948) |
|
rec (0.17307) |
|
nco (0.161734) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
ute (0.132784) |
|
bla (0.124347) |
|
cly (0.120642) |
|
med (0.116252) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
