Ss1.1-LyN1-MLN01B020015.5
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GTGACGCAGGAGCCGGGAAAGCATGGCGGCGGCCACTGGACCCTCGTTTTGGCTGGGCAA
TGAAACCCTGAAGGTGCCGCTGGCGCTGTTTGTCCTGAACAGGCGGCGCCTGTGTGAGCG
GCTGCGGAAGAACCCTGCGGTGCAGGCCGGCTCTGTGGTGGTGCTGCAGGGCGGGGAGGA
GACGCAGCGCTACTGCACTGACACTGGGGTCCTTTTCCGCCAGGAGTCCTTCTTTCACTG
GGCGTTTGGTGTCACCGAGCCAGGCTGCTACGGCGTGATTGACATAGACTCTGGGACATC
CACTCTGTTCGTGCCCAGGCTTCCTCCCAGCCATGCCACCTGGATGGGAAAGATCCACTC
CAAGGAGCACTTCAAGGAGAAGTACGCCGTGGACGACGTCCATTATGCGGACGAGATCGC
CAGCGTCCTGACATCACGGAGCCCCTCTGTCCTCCTCACTTTGCGCGGCGTCAACACCGA
CAGCGGCAGTGTCTGCAGGGAGGCCTCCTTTGAGGGCATCAGCAAGTTCAATGTCAACAA
TACCATTCTTCATCCGGAGATCGTGGAATGCCGGGTCTTCAAGACGGACATGGAGCTGGA
GGTTTTGCGCTACACCAATAAAATTTCCAGCGAGGCCCACCGGGAGGTAATGAAGGCTGT
AAAAGTGGGAATGAAAGAATACGAAATGGAAAGCCTCTTCGAGCACTACTGCTACTCCCG
GGGCGGCATGCGCCACAGCTCCTACACCTGCATCTGCGGCAGTGGTGAGAACTCGGCCGT
GCTGCACTACGGACACGCCGGGGCCCCCAACGACCGGACCATCCAGGACGGGGACATGTG
CCTGTTCGACATGGGCGGTGAGTACTACTGCTTCGCCTCGGATATCACGTGCTCCTTTCC
CGCCAACGGCAAGTTCACCGAGGACCAGAAGGCCATCTACGAGGCGGTGCTGCGGAGCTG
CCGGGCCGTCATGAACTCCATGAAGCCAGGCGTCTGGTGGCCTGACATGCACCGCCTGGC
CGACCGCGTCCACCTGGAAGAGCTGACCCGCATCGGCATCCTGACCGGCAGCGTGGACGC
CATGGTCCAGGTCCACCTGGGAGCTGTGTTTATGCCTCACGGGCTCGGCCACTTCCTGGG
CATCGATGTGCACGACGTGGGCGGCTACCCTGAGGGTGTGGAGCGCATCGACGAGCCCGG
CTTGCGGAGCCTGCGCACTGCTCGGCACCTGCAGGCGGGCATGGTGCTCACGGTGGAGCC
GGGCATCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCAGACCCGGCCCGCGCCTG
CTTCTTCAACTGCGAGGTCCTGCAGCGCTTCCGTGGTTTTGGTGGGGTCCGGATCGAGGA
GGACGTCGTGGTGACCAACAGTGGCATGGAGCTGCTGACCTGTGTGCCCCGCACAGTGGA
GGAGATTGAAGCTTGCATGGCAGGCCGCGACAAAGCTTTTGTTCCCTTCTCTGGACCAAA
GTAGAGCCGCAGCCTCACAAGCTGACATCACGGAGGGCCTGGGGATTGGCCCTCCAAGCA
AGCAGGGGTCCGGTGCTCCACCATCACAGGCGACATTGGCACTTGAGCACCCCATTCAGT
GCTGTTTCCTAGGGAGAAACTTTTTAATTACTCTTCTGTGGGGATCACACCCTTTACTAC
TTTGCTTAAATGACAGTGGCTTTTAAATGCTAATTTTCAATTATCCTATTATTTTCAATA
AATCCTGTTCTTTACCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GTGACGCAGGAGCCGGGAAAGCATGGCGGCGGCCACTGGACCCTCGTTTTGGCTGGGCAA
TGAAACCCTGAAGGTGCCGCTGGCGCTGTTTGTCCTGAACAGGCGGCGCCTGTGTGAGCG
GCTGCGGAAGAACCCTGCGGTGCAGGCCGGCTCTGTGGTGGTGCTGCAGGGCGGGGAGGA
GACGCAGCGCTACTGCACTGACACTGGGGTCCTTTTCCGCCAGGAGTCCTTCTTTCACTG
GGCGTTTGGTGTCACCGAGCCAGGCTGCTACGGCGTGATTGACATAGACTCTGGGACATC
CACTCTGTTCGTGCCCAGGCTTCCTCCCAGCCATGCCACCTGGATGGGAAAGATCCACTC
CAAGGAGCACTTCAAGGAGAAGTACGCCGTGGACGACGTCCATTATGCGGACGAGATCGC
CAGCGTCCTGACATCACGGAGCCCCTCTGTCCTCCTCACTTTGCGCGGCGTCAACACCGA
CAGCGGCAGTGTCTGCAGGGAGGCCTCCTTTGAGGGCATCAGCAAGTTCAATGTCAACAA
TACCATTCTTCATCCGGAGATCGTGGAATGCCGGGTCTTCAAGACGGACATGGAGCTGGA
GGTTTTGCGCTACACCAATAAAATTTCCAGCGAGGCCCACCGGGAGGTAATGAAGGCTGT
AAAAGTGGGAATGAAAGAATACGAAATGGAAAGCCTCTTCGAGCACTACTGCTACTCCCG
GGGCGGCATGCGCCACAGCTCCTACACCTGCATCTGCGGCAGTGGTGAGAACTCGGCCGT
GCTGCACTACGGACACGCCGGGGCCCCCAACGACCGGACCATCCAGGACGGGGACATGTG
CCTGTTCGACATGGGCGGTGAGTACTACTGCTTCGCCTCGGATATCACGTGCTCCTTTCC
CGCCAACGGCAAGTTCACCGAGGACCAGAAGGCCATCTACGAGGCGGTGCTGCGGAGCTG
CCGGGCCGTCATGAACTCCATGAAGCCAGGCGTCTGGTGGCCTGACATGCACCGCCTGGC
CGACCGCGTCCACCTGGAAGAGCTGACCCGCATCGGCATCCTGACCGGCAGCGTGGACGC
CATGGTCCAGGTCCACCTGGGAGCTGTGTTTATGCCTCACGGGCTCGGCCACTTCCTGGG
CATCGATGTGCACGACGTGGGCGGCTACCCTGAGGGTGTGGAGCGCATCGACGAGCCCGG
CTTGCGGAGCCTGCGCACTGCTCGGCACCTGCAGGCGGGCATGGTGCTCACGGTGGAGCC
GGGCATCTACTTCATCGACCACCTCCTGGATGAGGCCCTGGCAGACCCGGCCCGCGCCTG
CTTCTTCAACTGCGAGGTCCTGCAGCGCTTCCGTGGTTTTGGTGGGGTCCGGATCGAGGA
GGACGTCGTGGTGACCAACAGTGGCATGGAGCTGCTGACCTGTGTGCCCCGCACAGTGGA
GGAGATTGAAGCTTGCATGGCAGGCCGCGACAAAGCTTTTGTTCCCTTCTCTGGACCAAA
GTAGAGCCGCAGCCTCACAAGCTGACATCACGGAGGGCCTGGGGATTGGCCCTCCAAGCA
AGCAGGGGTCCGGTGCTCCACCATCACAGGCGACATTGGCACTTGAGCACCCCATTCAGT
GCTGTTTCCTAGGGAGAAACTTTTTAATTACTCTTCTGTGGGGATCACACCCTTTACTAC
TTTGCTTAAATGACAGTGGCTTTTAAATGCTAATTTTCAATTATCCTATTATTTTCAATA
AATCCTGTTCTTTACCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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gi|20271451|gb|AAH28295.1| |
Protein identifier
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gi|20271451|gb|AAH28295.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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39-224, gnl|bosTau2|chr18 (37088525-37088710) |
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39-224, gnl|canFam2|chr1 (121583382-121583168) |
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39-224, gnl|danRer3|chrNA (82660748-82660569) |
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39-224, gnl|dasNov1|scaffold_119997 (2968-3161) |
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39-224, gnl|fr1|chrUn (283857295-283857499) |
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39-224, gnl|hg17|chr19 (38695315-38695542) |
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39-224, gnl|Hg17|chr19 (38695523-38695338) |
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39-224, gnl|mm7|chr7 (31809027-31808799) |
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39-224, gnl|Mm7|chr7 (31808816-31809001) |
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39-224, gnl|monDom2|scaffold_35 (2498735-2498529) |
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39-224, gnl|panTro1|chr20 (35210991-35211227) |
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39-224, gnl|rheMac2|chr19 (40036304-40036531) |
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39-224, gnl|rn3|chr1 (87508648-87508418) |
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39-224, gnl|tetNig1|chrUn_random (88030122-88030350) |
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39-224, gnl|xenTro1|scaffold_129 (706611-706814) |
| |
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986-1205, gnl|bosTau2|chr18 (36681562-36681341) |
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986-1205, gnl|Hg17|chr19 (38574229-38574008) |
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986-1205, gnl|Mm7|chr7 (31929725-31929945) |
| |
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1366-1508, gnl|bosTau2|chr18 (36677581-36677439) |
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1366-1508, gnl|Hg17|chr19 (38570228-38570086) |
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1366-1508, gnl|Mm7|chr7 (31933288-31933430) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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39-224, gnl|bosTau2|chr18 (37088525-37088710) |
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39-224, gnl|canFam2|chr1 (121583382-121583168) |
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39-224, gnl|danRer3|chrNA (82660748-82660569) |
|
39-224, gnl|dasNov1|scaffold_119997 (2968-3161) |
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39-224, gnl|fr1|chrUn (283857295-283857499) |
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39-224, gnl|hg17|chr19 (38695315-38695542) |
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39-224, gnl|Hg17|chr19 (38695523-38695338) |
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39-224, gnl|mm7|chr7 (31809027-31808799) |
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39-224, gnl|Mm7|chr7 (31808816-31809001) |
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39-224, gnl|monDom2|scaffold_35 (2498735-2498529) |
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39-224, gnl|panTro1|chr20 (35210991-35211227) |
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39-224, gnl|rheMac2|chr19 (40036304-40036531) |
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39-224, gnl|rn3|chr1 (87508648-87508418) |
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39-224, gnl|tetNig1|chrUn_random (88030122-88030350) |
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39-224, gnl|xenTro1|scaffold_129 (706611-706814) |
| |
|
986-1205, gnl|bosTau2|chr18 (36681562-36681341) |
|
986-1205, gnl|Hg17|chr19 (38574229-38574008) |
|
986-1205, gnl|Mm7|chr7 (31929725-31929945) |
| |
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1366-1508, gnl|bosTau2|chr18 (36677581-36677439) |
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1366-1508, gnl|Hg17|chr19 (38570228-38570086) |
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1366-1508, gnl|Mm7|chr7 (31933288-31933430) |
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nje (1.82512) |
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jej (0.692452) |
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amn (0.417711) |
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nep (0.36785) |
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eru (0.360144) |
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nco (0.323468) |
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fce (0.271592) |
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pla (0.267344) |
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cov (0.264306) |
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ece (0.229305) |
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jca (0.22792) |
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col (0.195008) |
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ill (0.175593) |
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eye (0.170503) |
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cag (0.151194) |
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lnt (0.142308) |
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nmm (0.132802) |
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eep (0.122564) |
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clu (0.119646) |
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med (0.116252) |
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eje (0.0988338) |
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nje (1.82512) |
|
jej (0.692452) |
|
amn (0.417711) |
|
nep (0.36785) |
|
eru (0.360144) |
|
nco (0.323468) |
|
fce (0.271592) |
|
pla (0.267344) |
|
cov (0.264306) |
|
ece (0.229305) |
|
jca (0.22792) |
|
col (0.195008) |
|
ill (0.175593) |
|
eye (0.170503) |
|
cag (0.151194) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
eep (0.122564) |
|
clu (0.119646) |
|
med (0.116252) |
|
eje (0.0988338) |
