Non-Coding RNA Search

Ss1.1-LyN1-MLN01B040030.5

Sequence:


               
               AATTGAATACATAAAGGAAAAGATGACTTAAGAAGGCAGTTTTGTCTTGTTACATTTGGA
ATTAAACTAAAAATGATCCAGCAGTTAGCTTCTTAGAATTGTATTTTAATAGTGTGTGGA
GCATGTAGAATGATAGGAGTCAAGGCTTGTTTTAAATAGATGTTCAAGAAGAGTTTTATG
CAGACTGAACCGGGAGCCTTTTAGTAATGTGTATTTAAAAGCCTACTTAAATATCTAAAG
GAAGACCTTTGTATAGGAAAAATTTAAAGGACATATAGTTGGTTTAAAACAAATGTAGTA
TTTATAAGTAACCAATATTAATGTCAGTCTTTTGGTTGGGAGCGGTGGAAACGTGGATGA
GCACAGGCCAATTTGTAAATATTAGGAGGCTTTTGGAGGTCAGTGTGGAGGGAAGGTAAG
CAACCCGGGGGAGCAGCAGTGCGCTGGGCTTCGGGGATAATTGGAACCAGGTGCTTGGGT
GCAGTTGGGCCTCTTCTATTGCTTGCTTGTAACTGTCTGCTCCCCCACCCACCCCACCCC
CTGCCCCAGGGCAGGGAGCTAGTGCTTCCTGAATTTCGCATTTTTCACATCCTTCCAAAG
GGGCTTTCTGTCTCTGATTCAGTTGTAGAAATCCCATGGAGGGATTCTGACTGGTCCACC
TTCCTCACTGGTCCTGGCATCTCCCTGGACCAAGCTGCTATGAAAAGGTGGCTGCTCTTG
CCCACTGGGCCTGATGCCTGGGAGCAGAGGTGCCTGTCCTGGTATAAGAGCTGGCTGATT
GTCTTGGTGCCCATGTGCCCTGTTTTGTGTGTTTGGCAAATACATGGTTTTCTGACTTGA
GCATTCGTAGCTTTTATTATCTTCTCAACAAGGTCTGGGACTTGAAATAATGTTGGAGAA
ATAGATGATAGGTTTATGTATGGGCACTGGAAAAGATTAAAGAAGGAAACTAGGGTGTAA
AAATGCAATGAAGGACTATGAAATATTGACTGAATGGAATATAATGAGGCAATTAAATTA
AAATAATAATGAGCTAGATTTTAGATGAAACTCAGTGAATTCAACCCAAGATAACCACTC
ATTTAAGAACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGAATACATAAAGGAAAAGATGACTTAAGAAGGCAGTTTTGTCTTGTTACATTTGGA
ATTAAACTAAAAATGATCCAGCAGTTAGCTTCTTAGAATTGTATTTTAATAGTGTGTGGA
GCATGTAGAATGATAGGAGTCAAGGCTTGTTTTAAATAGATGTTCAAGAAGAGTTTTATG
CAGACTGAACCGGGAGCCTTTTAGTAATGTGTATTTAAAAGCCTACTTAAATATCTAAAG
GAAGACCTTTGTATAGGAAAAATTTAAAGGACATATAGTTGGTTTAAAACAAATGTAGTA
TTTATAAGTAACCAATATTAATGTCAGTCTTTTGGTTGGGAGCGGTGGAAACGTGGATGA
GCACAGGCCAATTTGTAAATATTAGGAGGCTTTTGGAGGTCAGTGTGGAGGGAAGGTAAG
CAACCCGGGGGAGCAGCAGTGCGCTGGGCTTCGGGGATAATTGGAACCAGGTGCTTGGGT
GCAGTTGGGCCTCTTCTATTGCTTGCTTGTAACTGTCTGCTCCCCCACCCACCCCACCCC
CTGCCCCAGGGCAGGGAGCTAGTGCTTCCTGAATTTCGCATTTTTCACATCCTTCCAAAG
GGGCTTTCTGTCTCTGATTCAGTTGTAGAAATCCCATGGAGGGATTCTGACTGGTCCACC
TTCCTCACTGGTCCTGGCATCTCCCTGGACCAAGCTGCTATGAAAAGGTGGCTGCTCTTG
CCCACTGGGCCTGATGCCTGGGAGCAGAGGTGCCTGTCCTGGTATAAGAGCTGGCTGATT
GTCTTGGTGCCCATGTGCCCTGTTTTGTGTGTTTGGCAAATACATGGTTTTCTGACTTGA
GCATTCGTAGCTTTTATTATCTTCTCAACAAGGTCTGGGACTTGAAATAATGTTGGAGAA
ATAGATGATAGGTTTATGTATGGGCACTGGAAAAGATTAAAGAAGGAAACTAGGGTGTAA
AAATGCAATGAAGGACTATGAAATATTGACTGAATGGAATATAATGAGGCAATTAAATTA
AAATAATAATGAGCTAGATTTTAGATGAAACTCAGTGAATTCAACCCAAGATAACCACTC
ATTTAAGAACTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-337, gnl|bosTau2|chr13 (15473375-15473043)
               

               
               1-337, gnl|Hg17|chr10 (23040014-23039687)
               

               
               1-337, gnl|Mm7|chr2 (19059921-19059616)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-337, gnl|bosTau2|chr13 (15473375-15473043)
               

               
               1-337, gnl|Hg17|chr10 (23040014-23039687)
               

               
               1-337, gnl|Mm7|chr2 (19059921-19059616)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	1-337, gnl\|bosTau2\|chr13 (15473375-15473043)
	1-337, gnl\|Hg17\|chr10 (23040014-23039687)
	1-337, gnl\|Mm7\|chr2 (19059921-19059616)