Ss1.1-LyN1-MLN01B040056.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTATCCCCGCCCCCGACGGTCCCGCGAGGTTCTCCGGTGCCTAGCTCCTAGCCTCTGCG CTGGGCCGCAGGGAGAGGTTCCGGACCCCGGGCGTGGGCGGGGGGCTGGTGTTGCCACCA CTGGCCTGCCCACTCCAGCCCCCTCGGCATCGCCTCTGGAGCTTCAGCTGCCGCATGCTG TGCAGATAAGAATCCCAAGAAACGCAGATGGCATCTGGGGATTTCTGCTCACCTGGAGAA GGGATGGAACTACTCCAACAAGTGTGCAGCAAACAGCTTCCTCCTTGTCACCTGAGGGAA GAGGACCTGTTACAGAACCCACACTTCAGCAAACTACTTCTGAGTCTCTCTCAACACATG GACGAGTGTGGCTTAAGCCTCATCCTGGCAAAGGAGCAGACTCAGGCATGGAAGGAAGTT CGACTGCACAAGACAAAATGGTTGAGGTTTGAGATTTTGCATAGAGTCATTCAAGAGCTG CTTGTCGACTACTATGTAAAAATACAAGACACAAATTTAACTTCTGAGGACAAAAAGTTT CATGAGACCCTTGAACAGCGACTGCTTGTGACTGAGCTGACACAGCTCTTGGGCCCCAGA CAAGAGACAGAGGTGCCTTCACTGCTAGGGCTGGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTATCCCCGCCCCCGACGGTCCCGCGAGGTTCTCCGGTGCCTAGCTCCTAGCCTCTGCG CTGGGCCGCAGGGAGAGGTTCCGGACCCCGGGCGTGGGCGGGGGGCTGGTGTTGCCACCA CTGGCCTGCCCACTCCAGCCCCCTCGGCATCGCCTCTGGAGCTTCAGCTGCCGCATGCTG TGCAGATAAGAATCCCAAGAAACGCAGATGGCATCTGGGGATTTCTGCTCACCTGGAGAA GGGATGGAACTACTCCAACAAGTGTGCAGCAAACAGCTTCCTCCTTGTCACCTGAGGGAA GAGGACCTGTTACAGAACCCACACTTCAGCAAACTACTTCTGAGTCTCTCTCAACACATG GACGAGTGTGGCTTAAGCCTCATCCTGGCAAAGGAGCAGACTCAGGCATGGAAGGAAGTT CGACTGCACAAGACAAAATGGTTGAGGTTTGAGATTTTGCATAGAGTCATTCAAGAGCTG CTTGTCGACTACTATGTAAAAATACAAGACACAAATTTAACTTCTGAGGACAAAAAGTTT CATGAGACCCTTGAACAGCGACTGCTTGTGACTGAGCTGACACAGCTCTTGGGCCCCAGA CAAGAGACAGAGGTGCCTTCACTGCTAGGGCTGGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-185, gnl|bosTau2|chr10 (14087295-14087487) | |
| 2-185, gnl|canFam2|chr8 (6284798-6284926) | |
| 2-185, gnl|dasNov1|scaffold_16655 (89950-90080) | |
| 2-185, gnl|hg17|chr14 (22495962-22496100) | |
| 2-185, gnl|Hg17|chr14 (22496156-22495965) | |
| 2-185, gnl|mm7|chr14 (49420244-49420380) | |
| 2-185, gnl|monDom2|scaffold_12 (26892093-26891970) | |
| 2-185, gnl|panTro1|chr15 (21462675-21462813) | |
| 2-185, gnl|rheMac2|chr7 (85775218-85775356) | |
| 2-185, gnl|rn3|chr15 (32628801-32628936) | |
| 260-411, gnl|bosTau2|chr10 (14091769-14091920) | |
| 260-411, gnl|Hg17|chr14 (22491735-22491584) | |
| 260-411, gnl|Mm7|chr14 (49416039-49415888) | |
| 536-636, gnl|bosTau2|chr10 (14092476-14092576) | |
| 536-636, gnl|canFam2|chr8 (6280177-6280354) | |
| 536-636, gnl|canFam2|chr8 (6280183-6280316) | |
| 536-636, gnl|dasNov1|scaffold_16655 (84980-85169) | |
| 536-636, gnl|dasNov1|scaffold_16655 (84986-85119) | |
| 536-636, gnl|echTel1|scaffold_308447 (48265-48083) | |
| 536-636, gnl|echTel1|scaffold_308447 (48259-48126) | |
| 536-636, gnl|hg17|chr1 (167070645-167070778) | |
| 536-636, gnl|hg17|chr14 (22490600-22490785) | |
| 536-636, gnl|Hg17|chr14 (22490740-22490640) | |
| 536-636, gnl|loxAfr1|scaffold_49335 (9355-9172) | |
| 536-636, gnl|loxAfr1|scaffold_49335 (9349-9216) | |
| 536-636, gnl|mm7|chr14 (49414862-49415022) | |
| 536-636, gnl|mm7|chr14 (49414871-49415001) | |
| 536-636, gnl|Mm7|chr14 (49415002-49414902) | |
| 536-636, gnl|monDom2|scaffold_12 (26896441-26896263) | |
| 536-636, gnl|monDom2|scaffold_12 (26896434-26896301) | |
| 536-636, gnl|oryCun1|scaffold_139745 (23081-23214) | |
| 536-636, gnl|oryCun1|scaffold_199976 (13024-13203) | |
| 536-636, gnl|panTro1|chr1 (149344585-149344718) | |
| 536-636, gnl|panTro1|chr15 (21457311-21457494) | |
| 536-636, gnl|rheMac2|chr1 (200061674-200061807) | |
| 536-636, gnl|rheMac2|chr7 (85769548-85769727) | |
| 536-636, gnl|rn3|chr10 (1488025-1488158) | |
| 536-636, gnl|rn3|chr15 (32622685-32622857) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-185, gnl|bosTau2|chr10 (14087295-14087487) | |
| 2-185, gnl|canFam2|chr8 (6284798-6284926) | |
| 2-185, gnl|dasNov1|scaffold_16655 (89950-90080) | |
| 2-185, gnl|hg17|chr14 (22495962-22496100) | |
| 2-185, gnl|Hg17|chr14 (22496156-22495965) | |
| 2-185, gnl|mm7|chr14 (49420244-49420380) | |
| 2-185, gnl|monDom2|scaffold_12 (26892093-26891970) | |
| 2-185, gnl|panTro1|chr15 (21462675-21462813) | |
| 2-185, gnl|rheMac2|chr7 (85775218-85775356) | |
| 2-185, gnl|rn3|chr15 (32628801-32628936) | |
| 260-411, gnl|bosTau2|chr10 (14091769-14091920) | |
| 260-411, gnl|Hg17|chr14 (22491735-22491584) | |
| 260-411, gnl|Mm7|chr14 (49416039-49415888) | |
| 536-636, gnl|bosTau2|chr10 (14092476-14092576) | |
| 536-636, gnl|canFam2|chr8 (6280177-6280354) | |
| 536-636, gnl|canFam2|chr8 (6280183-6280316) | |
| 536-636, gnl|dasNov1|scaffold_16655 (84980-85169) | |
| 536-636, gnl|dasNov1|scaffold_16655 (84986-85119) | |
| 536-636, gnl|echTel1|scaffold_308447 (48265-48083) | |
| 536-636, gnl|echTel1|scaffold_308447 (48259-48126) | |
| 536-636, gnl|hg17|chr1 (167070645-167070778) | |
| 536-636, gnl|hg17|chr14 (22490600-22490785) | |
| 536-636, gnl|Hg17|chr14 (22490740-22490640) | |
| 536-636, gnl|loxAfr1|scaffold_49335 (9355-9172) | |
| 536-636, gnl|loxAfr1|scaffold_49335 (9349-9216) | |
| 536-636, gnl|mm7|chr14 (49414862-49415022) | |
| 536-636, gnl|mm7|chr14 (49414871-49415001) | |
| 536-636, gnl|Mm7|chr14 (49415002-49414902) | |
| 536-636, gnl|monDom2|scaffold_12 (26896441-26896263) | |
| 536-636, gnl|monDom2|scaffold_12 (26896434-26896301) | |
| 536-636, gnl|oryCun1|scaffold_139745 (23081-23214) | |
| 536-636, gnl|oryCun1|scaffold_199976 (13024-13203) | |
| 536-636, gnl|panTro1|chr1 (149344585-149344718) | |
| 536-636, gnl|panTro1|chr15 (21457311-21457494) | |
| 536-636, gnl|rheMac2|chr1 (200061674-200061807) | |
| 536-636, gnl|rheMac2|chr7 (85769548-85769727) | |
| 536-636, gnl|rn3|chr10 (1488025-1488158) | |
| 536-636, gnl|rn3|chr15 (32622685-32622857) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) | |
| nbm (0.0993246) |